Carettochelys insculpta (pitted-shelled turtle): 142009329
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Entry
142009329 CDS
T11194
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
142009329 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ciz01009
]
142009329 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ciz04131
]
142009329 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
ciz03029
]
142009329 (RB1CC1)
Protein phosphatases and associated proteins [BR:
ciz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
142009329 (RB1CC1)
Membrane trafficking [BR:
ciz04131
]
Autophagy
Autophagosome formation proteins
ULK complex
142009329 (RB1CC1)
Mitochondrial biogenesis [BR:
ciz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
142009329 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
142009329
NCBI-ProteinID:
XP_074843281
LinkDB
All DBs
Position
2:76507932..76652037
Genome browser
AA seq
1594 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVSDLKHAIQTKYKIAIQHQVLVVNGGECMAADRKVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENAYSNYLQ
SIDDIKLKLTHLGTAVSIMAKIPLLECLTRHSYRECLERLDSSVERAGAESEETEEEKSP
ELVLSCDTPRVNNISLLASFCKSVEHSALENTGPGIVKENRESGENTIIEDSRTSEEVNE
SDLPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLVECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKDLAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALFRLVTE
LLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAAALIRDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLTDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKVSNSQASPQSATTPRMES
AKGNTIATSSRTPPSLSHQGPLCPPVCPPAPLDELSPDSIDAQTFDFETIAHPNLEQALE
QGSLDLDSLAESPESDFKSAVTEFVIEENPSSPNIVSDPQSPEMMVESLYSSVINAIDSR
RMQDTNVCVKEDSLNARMKKCRGVAQESRFNLRNIKEDLCHFRTFVQKEQCDFSNSLKCT
SVEIRNVIQKVKLSLEKTLKDKHQKELQSLKSEYETRIDTLLEDVEENKKKIKKLKVDLV
SLEEVLQSKDNEFAMVKNEKEAVVCLQNERNQKLLALEGQMKDQNSEIKELRQSREMILE
DLKKLQIENDEKIQLLRAEFQSLEQSHLKELENNLQMRHAQESEKLIAEHKDCLDKLQKE
NQERLEQMKESHSAVLQEKDLQIEELKLKVTDLFDLRCKLEVELALKEAETDEMKMLLEE
SKTQQQEILKSLIDKETENLRRELEKLNHKIQVNNDEYQMGLAELRTLMTIEKDQCISEL
VDRHEEEANKLKTELNKITSLYQKAFEIEKRLKEQIIELQSKLEVEANAVEKQKEEKVAL
CEQKDKFEAVIRNLKEEKELLITHQEQERKLLVQKLSSEKEEAIQVTLKEFELQREAVEK
ELLEKIQLLQMQVNQSPPVELSAASSLVAELQEKLEEEKMKFLEQLEEQEKRKNEEMQNF
RMSLTAEQQTNFNTVLTREKMKKENIINDLSDKLKKITEQQERDKDLIETLSEDRARLLE
EKKKLEEEANNLRSSNFIPSAYLPTVSESCDACSSDFPDETERMASEITDEGRLDSAMET
SMMATHENIHMLSKEKQRIMVLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRD
FQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVLGKVM
EKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtatttctggtcaacactggaactaccctcacctttgatacagaactt
gcagtacagaatgtgtccgaccttaaacatgcaatccaaaccaagtataagattgccatt
cagcaccaggtgctggttgtcaatggaggggagtgtatggcagcagatagaaaagtctgt
agttacagtgctggaacagacacaaacccaattttcctgttcaacaaagagatgatctta
tgtgaacgcccacctgctattcctaaaaccacgttttcagcagagaacgagatggaatta
aaagttgaagagtctctcatgatgcctgcagtttttcacacggtagcttcacggacacag
cttgctgtggaaatgtatgaagttgccaagaagctttgttccttttgtgaaggtctggtc
catgatgaacatcttcagcaccaaggctgggctgccataatggcaaatttggaagattgc
acatattcttatcaaaagctgcttttcaagtttgaaaatgcatattcaaattatctgcag
tctatagatgatattaagctgaaactcacacacttggggacagctgtttctataatggcc
aagatcccactgctggaatgcctaactaggcatagttacagagagtgtttagaaagattg
gattcttctgttgagcgtgcaggggcagaaagtgaagaaactgaagaagaaaagtctcct
gaactggttctttcttgtgatacacctagagtgaacaatatatctcttttagcctcattt
tgcaagtcagtggaacattcagccctggagaacacaggtcctggaattgtcaaagaaaat
agggaatccggtgaaaacactataattgaggacagtagaacttcagaggaagttaacgag
agtgatctgccttccttcaacgtctctctgttggactggataaatgttcaagatagacct
aacgatgtggaatcgttagtcagaaaatgttttgattctatgagcagacttgatcccagg
atcattcagcccttcttggtagaatgtcgacaaactattgccaaacttgataatcaaaac
atgaaggcaattaaagggcttgaggacaggctttatgcgttggatcagatgatagctagc
tgcagcagactggtaaatgaacaaaaagaccttgctcagggatttttggctaatcagaag
agagctgagaacttgaaggatccttctgtgctacctgatttgtgtttgagtcatgcaaat
cagctgatgattatgctaactaatcacaggaaactgttagatattaaacagaaatgtacc
actgccaaacaagagcttgcaaataatctacaagtcagattaaagtggtgttgctttgtg
atgcttcacgcggatcaagatggagagaagctgcaagccttgtttcgccttgtaacagag
ctgctagaaagagtgaagatcgtagaggctctcagtactgttcctcaaatgtactgttta
gctgttgttgaggttgtaaggaggaaaatgtttataaaacactacagagagtgggctgct
gctttaataagagatgggaaacatctatatgaagctgaaaaagcaaaaagggaatctttt
gggaaattgtttaggaagtcttttttaaggaatcgtttgtttaggggtcttgactcttgg
cctccatccttttgtacacgaaagcctcgcaggtttgacagtgagcttccggatatctca
ttaactgacttacagtttctgcagtctttttgtccttcagaagtgcaaccattactcagg
gttcccatactgtgtgattttgaacctcttcaccagcatgtacttgctctacataacctg
gtaaaagcagcacaaagtttggatgaaatgtcacagactattacagatctgctgaatgag
caaaaggtctccaatagtcaagcatccccacaatctgctactacaccaaggatggaaagt
gctaaaggaaacacaattgctacctcttctagaactcctccatcactcagtcatcagggt
cccttatgtcctcccgtgtgtcccccagctccgttagatgaattgtctccggacagcatt
gatgctcaaacatttgattttgaaacaatcgctcatccgaacttagagcaagcccttgag
caagggtctttagacttggattcactagcagaaagcccagaatctgattttaagtcagca
gtgactgaatttgtaatagaggaaaatccgtcatctcctaatattgtaagtgatccacag
agtccagaaatgatggtggaatccctctattcttcagttatcaatgcaatagacagtaga
cgtatgcaagacacaaatgtttgtgttaaggaagattctctaaatgctcgcatgaagaaa
tgtagaggagttgcgcaggaatcacggtttaatttaagaaacataaaagaagacctttgc
cactttagaacatttgtacagaaagagcagtgtgacttctcaaattctttaaaatgtaca
tcggtagaaataaggaatgttatacaaaaggtaaaactttcacttgaaaaaacactaaaa
gataaacatcaaaaagaattgcagtctttgaaaagtgagtatgaaactagaattgataca
ttactagaagatgtggaggaaaacaaaaagaagattaaaaagttaaaggtagacttagta
agtctcgaagaagttttgcaaagtaaagataatgaatttgccatggtgaagaatgaaaaa
gaagctgttgtttgtctgcagaatgagagaaaccaaaaattacttgcattggaagggcaa
atgaaggatcagaatagtgaaattaaagaactgaggcagtcacgtgagatgatattggaa
gatctgaaaaagcttcagattgaaaatgatgaaaagattcagcttctgagagcagaattt
cagagtttggagcaaagtcatcttaaagaattggaaaacaatctacaaatgaggcatgca
caggaatctgaaaaattaatagcagagcacaaggattgtttagataagctacaaaaagaa
aatcaagagagattggaacaaatgaaggaatctcattcagctgttctccaagagaaagat
ctacagatagaggaattaaagctcaaagttactgatctctttgacttgaggtgcaaatta
gaagttgaacttgcactgaaggaagcagaaacagatgaaatgaagatgttgttggaagaa
agtaaaactcagcaacaggagatcctaaagtcccttattgataaagaaactgaaaatttg
agaagggagttagaaaaattaaaccataagatacaagttaataatgatgaatatcaaatg
ggtcttgcagaactaagaactttaatgacaattgagaaagatcagtgcatttcagaatta
gtagacagacatgaagaagaagcaaataaacttaaaactgaattaaataaaataacctct
ttgtatcaaaaagctttcgaaatagaaaaacgtctcaaagagcaaataatagaactacag
agtaagttagaagtggaagcaaatgccgtagaaaagcaaaaagaggaaaaagtggctttg
tgtgaacagaaggacaaatttgaagctgttatccgtaatctcaaggaggaaaaagaactg
ttaataactcaccaagaacaggaaagaaaactactcgtacaaaagctcagtagtgaaaaa
gaggaggcaatacaagtaacccttaaggagtttgaattacaaagggaagctgttgaaaaa
gaactcttggaaaaaatacaactacttcagatgcaagtaaatcagagtcctcctgttgaa
ttatctgctgcatcaagcttggttgctgagcttcaagaaaagcttgaggaagaaaaaatg
aaatttttggagcaacttgaagagcaagaaaagagaaagaatgaagaaatgcaaaacttt
agaatgtctttaactgcagaacagcagaccaattttaacaccgtgctgacaagagaaaaa
atgaaaaaagaaaatataataaatgatctcagtgacaaattaaaaaaaatcacagaacag
caagaaagagataaggatttgattgaaacactttctgaagatcgtgctcgattactggaa
gagaagaaaaagcttgaagaggaagcgaataatctgagaagcagtaattttattccatca
gcatatttacctacagtttcagaatcctgtgatgcctgttcatctgatttcccagatgaa
acagagagaatggcttcagagattacagatgaaggaaggctggattctgcaatggagact
agcatgatggccacgcatgaaaacatccatatgttgtctaaagaaaaacagaggataatg
gtgttagaaagaacgctgcagcttaaagaagaggaaaataagcgattaaatcaaagattg
atgtcccaaagcatgtcttcagtatcttcaagacattctgaaaaaatagctatcagggat
tttcaggttggcgatttagttctcattatcttggatgagcgccatgacaactatgtattg
tttactgtcagtccaacattgtatttcttgcattcagaatctcttgctgcgctggatctc
aaaccaggtgagtgcgcttcaggtgcatctagaagaccttgggtgctaggaaaagtaatg
gaaaaggaatattgccaggcaaaaaaggcacaaaacagatttaaagttcctttgggtaca
aaattctacagagtgaaagcagtgccgtggaacaaaaaagtataa
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