KEGG   Carettochelys insculpta (pitted-shelled turtle): 142009426
Entry
142009426         CDS       T11194                                 
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
ciz  Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03013  Nucleocytoplasmic transport
ciz04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:ciz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    142009426 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    142009426 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ciz03019]
    142009426 (SEH1L)
   04131 Membrane trafficking [BR:ciz04131]
    142009426 (SEH1L)
Messenger RNA biogenesis [BR:ciz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     142009426 (SEH1L)
Membrane trafficking [BR:ciz04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    142009426 (SEH1L)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd ANAPC4_WD40 WDR55 Beta-prop_EIPR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 142009426
NCBI-ProteinID: XP_074843591
LinkDB
Position
2
AA seq 421 aa
MFVARSIAADHRDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGDWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAVVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEISCKISCSCISWNPSSSRAHSP
MIAVGSDDNSPNILAKVQIYEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHILAV
ATKDVRIFTLKPMRKELTSSGGLTKFEIQIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVNGSSQQGMFNASLGSANTSLQNSLNGSAAGRCFF
TPLDSPRAGSRWSSYAQVLPPPPPLLIDHSCDADTANLQYPHPSRRYITQHLNVLPENEG
I
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgttcgtggcgcgcagcatcgcggccgatcaccgcgacctcatccacgatgtctccttc
gacttccacgggcgacgcatggcgacctgctctagcgaccagagcgtcaaggtttgggac
aaaagtgaaaatggggattggcattgtactgccagctggaagacacacagtgggtccgtg
tggcgtgtgacatgggctcatccagaatttggacaggtcctggcttcctgctcttttgac
agaactgctgtagtatgggaagaaatagtgggagaatcgaatgataaacttcgagggcag
agtcattgggtaaaaaggaccactctggtagacagtaggacatctgttacagatgtgaag
tttgctcccaagcatatgggtcttatgttagcaacctgttcagcagatggagtagtgagg
atatatgaagctccggatgttatgaatctcagtcaatggtcattgcagcatgaaatctca
tgtaagataagctgcagctgtatttcttggaatccatcaagctctcgagctcattctcca
atgatagctgtaggaagtgatgacaacagtcccaatatactggctaaggttcagatttat
gaatacaatgaaaacaccaggaagtatgcaaaagcagaaactcttatgacagtcactgat
cctgtacatgatattgcgtttgctccaaacttgggacgatccttccatattttagctgta
gctaccaaagatgtacgaatttttacactgaaacctatgaggaaagaattgacatcatct
ggaggactaacaaaatttgaaattcagatagtagctcaatttgataatcacaattcccag
gtctggcgagtgagttggaacattacaggcacagtgcttgcatcatctggtgatgatggc
tgtgttaggctgtggaaagctaattatatggacaactggaagtgcactggtatactgaaa
ggtaacgggagtccagtcaatggtagttctcagcagggaatgtttaatgcttctctaggt
tcagccaatacaagcctacagaattcattaaatggatcagctgctggcaggtgtttcttt
acccctctggattccccacgggctggatcaagatggtccagttatgcccaggtcctacct
cctcctcctcctcttctgatagaccactcttgtgatgctgacactgccaaccttcagtat
cctcacccaagcagacgatatatcactcagcatcttaacgttttacctgagaatgaaggc
atttaa

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