Carettochelys insculpta (pitted-shelled turtle): 142009501
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Entry
142009501 CDS
T11194
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03013
Nucleocytoplasmic transport
ciz03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142009501 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
142009501 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142009501 (NUP153)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142009501 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
142009501
NCBI-ProteinID:
XP_074843755
LinkDB
All DBs
Position
2:complement(122077660..122140932)
Genome browser
AA seq
1462 aa
AA seq
DB search
MASGGGGGGGGGGGGGKIRTRRYHLGASKPYPRNKQQGIISRVTESVKNIVPGWLQRYFN
KSEDECVDASEPTSQQETQVNYHHGYPDDDTPVFDGRVTPESTRINLEEPSTSRSALNFS
DVLTRPSLHRSNLNCTILDSPSPNCQPSTSSAFAIGSSGLSLVKEIKDSTSQHDDDNIST
TSGFSSRASDKDIAVSKNTSIPPLWSTEAERSHSLTQHSAISSKKPAFNLSAFGALSPSF
GNASVIKTSQLGDSPFYPGKTTYGGAAAAARQSKIRITPYQTPVRRQMKAKQANVQSYGV
TSSTARRILQSLEKMSSPLADAKRIPSSVVSPLSSPVDRSMLDITRLHSKRRQVESQHPP
VQKLMTPKTISLSTSRSQYFKPSLTPAAESGKIRQRIDLKHKGMKEKNLTAEQQVETPEN
NFTYPKFSSPASNGLYSGMGGGGGGKMRRERGVHYVSQPGQEKQEVEAPVLPKISLPINT
TSLPSFSFGSLASATVSSSPITDTQTMTNKVQPASNSNSPVFRFSSPIVKSTEAEVLPPL
SIGFTFSVPVVKSTEASGSNDTSVPLLINTGTTAVNSTSNKKKEKEEYDGAFKPAKVLKE
GSVLDILKSPEFTSQKTLTPTATQSVSTSTEVYTRPAISNFSAGSLGFRETSKQASSYWH
CDTCLLQNKAADNKCITCQAAKVPTVDPAKQTGMLTLSSTVKSAAPATGTMGFGDKFKTA
VGTWDCDTCLVQNKPEATKCVACETPKPGTGVKPALTLPVVTENTVAVTSSPSCTETTVA
LGFGDKFKKPEGSWDCTVCLVSNKAEDSKCVACQCERPGDSMPVTISSTSSFSAPSGGFL
GLDKFKKPEGSWDCETCLVQNKAEATKCIACESAKAGTKPELKGFGTAAVSSDASAPSFK
FGIQSSSSESSQTLGSTESFKFGEQGGFKFGITSESGSVTNTMSGGLNSSKTSGDFKFGI
SSSDSKSESKKDSKSNSLNFGLPSGTNNPSTLAFQFGTSNLGQQEKKEEPVLGGFSFGTN
SAASIATSENKTGVTGFSFGTVEEKEVATSPFLFNKSEEKKDETPSARGGFTFGGMEGAS
ASQFVLGRTEEKQDSVTSATSLAFKKTVDNEEPKAQPIFSFGKSEQTKEESTAKPTFSFS
LAKPEEKEPEQTKPAFTFGAQTNSTDQGAAKPAFGFLTPGTSNTAITSTSANSSSVFGGS
TSASNPPSVAAAFLFGQASNTVSSSGFGSASESNASQSFGFTQERKPATTSSSTGAPVAS
FLFGSGTSSNSTANSGFNFGATTTSSSTGSSSSFVFGSGSSAPVAGPAFGASQTPTFGQS
QGASQPNAPAFGSLPSTTLFSAGSQSASPAFGSVSSSNQPPVFGQQASQQPGFGSGSTPN
SGAVFQFGSSTNFNFTSSSPGVFTFGANPGTPAPPTQPSGSSGFPFNQPSTFTMGSNGKN
IFSASGSSVSGRKIKTAVRRRK
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggcgggggaggcggcggcggcggcggcggcggaggggggaagatccggacc
cggcggtaccacctgggcgcctcgaagccctaccctcgaaacaagcagcagggaatcatt
agccgagttacagaatcagtgaagaatattgtaccaggatggttacaaaggtacttcaac
aaaagtgaagatgaatgtgtagatgcaagtgagcctacaagccagcaggaaactcaagta
aactatcatcatggttacccagatgatgacaccccagtgtttgatgggagggtcactcct
gagtcaacgagaattaatttagaagaaccatccacaagtagatctgcattaaacttctca
gatgtattaacaagaccctcacttcatcggagtaatttgaattgcaccatcttggattcc
ccctcaccgaactgccagccctccacatcctctgcatttgcaattggcagttctggactc
tcccttgtaaaagaaatcaaagattctacctctcagcatgatgatgataacatctcaact
actagtggcttctcttctagagcatctgataaagatatagcagtttcaaaaaatacgtcc
ataccacctctctggtccacagaggctgaacgatctcattctctcacacaacattctgcc
atcagctctaaaaaacctgcattcaacttatctgcttttggagctctatctccttcattt
ggtaatgcttctgtcattaagacaagccagcttggggattctccattttatcctggcaaa
acaacttatggtggtgcagctgcagcagccaggcagtctaaaatacgaattactccttat
cagacaccagtcagaagacaaatgaaagcaaagcaagcaaatgtgcaatcctatggagta
acaagttccacagcacggcgcatcttgcaatctctggagaagatgtcaagtcctttagca
gatgctaaaaggattccatcttctgttgtttctccattgtcttctcctgtggacaggagc
atgctagatattactcgcctccattccaagaggagacaggtcgaatcccagcacccccca
gtccagaaattaatgacaccgaagacaatttctctgtcaacgagccggtcacagtatttt
aaaccatctctgactccagctgctgagtcagggaagattagacagagaatagacctaaag
cacaaaggaatgaaagagaagaatctgactgcagagcaacaagtagaaacacctgaaaac
aattttacataccccaaattcagcagtcctgcatccaatggattatattctggaatggga
ggtggtggcggtggcaagatgagaagggaaagaggagtacactatgtatctcagccagga
caagaaaaacaggaggtggaggcaccagtactacccaaaatatccttaccaatcaatact
acatcactgcctagcttcagctttggttcccttgccagtgctactgtgtcatcatcacca
atcaccgatacacaaaccatgactaacaaggtgcaaccagcaagtaattctaatagtcct
gtgtttagattttcatctccaattgtaaaatctactgaggcagaagtgctacctccattg
tctattgggtttacgtttagtgttcctgttgtaaaatcaacagaagcttctggatccaat
gacacttcagtgccacttctgattaacacaggtaccactgctgtaaatagcaccagcaat
aagaagaaagaaaaggaagagtatgatggcgccttcaagcctgcgaaagtcttgaaagaa
gggagtgtactggatattctaaagagccctgagtttacttctcagaagacactcacccct
acagccacacagtctgtttcaacaagcacagaagtttatacacggcctgcaataagtaat
ttttctgcaggttcattggggttcagggagacctctaagcaagcttcatcatattggcac
tgtgacacatgtctcttacaaaacaaggcagcagacaacaaatgcataacctgtcaagct
gctaaagtcccgacagtggatcctgctaaacagactggaatgttgactctaagcagcact
gttaaatcagctgctcctgcaacaggaacaatgggctttggagacaaatttaaaacagca
gtagggacatgggattgtgatacatgtctagtccagaataaacctgaagctacaaaatgt
gtggcctgtgagacaccaaagcctggaacaggagtaaagcctgctctgacgttgccagtg
gtcacagaaaatacagtagcagtgacttcctctcctagctgcactgaaactacagtcgca
ttggggtttggagacaagttcaaaaagccggagggctcttgggactgtacagtgtgcctt
gtgtcaaataaggcagaagacagtaaatgtgtagcttgtcaatgtgagagaccaggggat
tccatgcctgtgactatcagcagcacatcctctttctcagctccttctggaggatttctg
ggattggacaaattcaagaaacctgagggaagctgggactgtgaaacatgcttggtacaa
aacaaagcagaggccacaaagtgcatagcatgtgagagtgcaaaagcaggcaccaaacct
gagctcaaaggttttggtactgctgctgtatcctcagatgcttctgcaccatcatttaaa
tttggtattcagtcatcctcctctgagtcatctcagacgttaggaagcacagaaagtttt
aaatttggagaacaaggaggtttcaagtttggcattacatcagagtcaggatctgtaaca
aacaccatgagtgggggcttaaattcctctaaaacttcaggggatttcaaatttggcatc
tcttcctcagattctaaatcggagagtaaaaaggacagtaagagtaacagtttaaacttt
ggacttccctcgggtacaaacaatccatctactttagcatttcagtttgggacatccaat
cttggacagcaggaaaagaaagaggaacctgttttagggggtttcagttttggcacaaat
tctgctgcctccatagctacatcagagaataaaacaggagtgactggattcagttttgga
actgtggaggaaaaggaagttgcaacaagtccatttttatttaataagtcagaggagaag
aaagatgaaactccttcagcaaggggaggcttcacttttggtggcatggagggtgcatct
gcctcacagtttgttttgggaaggacagaggagaaacaggactctgttacctctgctact
tcattagcgttcaagaagactgttgacaatgaggagccaaaggcacaacccatcttttcc
tttgggaagtctgagcagaccaaagaagagagcacagcaaaacccacattcagtttcagc
ttagcaaaaccagaggagaaggaaccggagcaaacaaaaccagcttttacgtttggggca
caaaccaatagtacagatcaaggggcagcaaagccagcctttggtttcttgactcctggt
acctccaatacagccataacaagcacttcagctaacagcagtagcgtgtttggtggtagc
acctctgcctcaaatcctccatcagttgctgcagcctttttgtttggacaagctagcaac
actgtgagcagttctggttttggcagtgcctctgaatccaatgcctctcagtcatttggg
ttcactcaagaacgcaaaccagccaccacatcatccagcacaggtgcacccgttgcgtca
tttctctttggttcaggaactagcagtaacagtactgcaaactctggtttcaacttcgga
gccacaaccacatcgagttctacaggttcttcctcttcatttgtgtttggctctggatct
tcagcacctgttgctggtccagcatttggtgccagccagacaccaacatttggtcaaagt
caaggggccagccagccaaatgctccagccttcggatcattaccatcaacgacattattt
tcagcaggctctcagtctgcatctccagcctttgggtctgtgtcaagcagtaatcagcct
cctgtctttggacagcaagcaagtcaacagcctggttttggctctggttcaacacctaat
tctggtgctgtattccagtttggaagtagtactaatttcaacttcacaagtagtagccca
ggagtatttacttttggtgcaaatcctggcacaccagcgccaccaacccagccttctggc
tcttcaggatttccatttaaccagccttcaacctttacaatggggtctaatggaaaaaat
attttctcagcttctggatcttcagtttctgggcggaagataaagactgcggttagacgt
agaaaataa
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