Carettochelys insculpta (pitted-shelled turtle): 142009564
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Entry
142009564 CDS
T11194
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
142009564 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142009564 (DROSHA)
03009 Ribosome biogenesis [BR:
ciz03009
]
142009564 (DROSHA)
03036 Chromosome and associated proteins [BR:
ciz03036
]
142009564 (DROSHA)
Enzymes [BR:
ciz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
142009564 (DROSHA)
Messenger RNA biogenesis [BR:
ciz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
142009564 (DROSHA)
Ribosome biogenesis [BR:
ciz03009
]
Eukaryotic type
90S particles
RNase
142009564 (DROSHA)
Prokaryotic type
rRNA processing factors
142009564 (DROSHA)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
142009564 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
142009564
NCBI-ProteinID:
XP_074843899
LinkDB
All DBs
Position
2:134102404..134226800
Genome browser
AA seq
1335 aa
AA seq
DB search
MSFHSGRGCPRGRGGPGVRTSTQTFRPQNLRQLHPQQPSVQYQYDQQVAPPATYSSPPAT
GYVPPRPDFVPYPSPVPPSAQSPISQCPMRPPFPNHQVRQSFPVPPCFPPAPPPVPNPGN
SPVPGAPSGQNAFPYMMPPPAMPHPPPPPVMPQQVNYQPVYSTGYSQQSFPPPNFNSYHH
NSNSFQSSNSNSSSSNSHFRHTSQYQVEKAQSERRSPERSKHYDEHRHREHGHVHGDRHR
SSNHGDRRDRGRSPDRRRQESSRHRSDYDRGRTPPRHRSYERSRERERERHRHRDSRRSP
SSERSYKKDYKRTGSRSPSRERKRPRWEEERERWSENQSASKEKSYTAIKDKEPEEIISE
KNEDEDEELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSRLRDLYERFEDELGKRQAK
AKAARPPWEPPKTKLDEDLESSSESDCDSDDNSSCSSSSDSEVFDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEPIKPCRPMTNNAGRLYHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVRGLELFSLYLFRDILELYDWNLIGPSFENNSCCPRFHFMPRFVRFLPDGGKEVLSM
HQILLYLLRCNKPLVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLDR
EQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKLS
QREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHL
DKLIGYTFQDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRK
KGINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATY
RTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEE
AKQLFGRLLFNDKDLQEVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVIFT
HVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRS
SLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHT
FMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYT
VAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWER
EHQERETEETEEVRK
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcattctggacgaggttgcccacgtggtcgaggaggacctggtgtaagaacg
tcaacacagaccttcagacctcagaatctgagacagcttcaccctcagcagccttcagtg
cagtaccaatatgaccagcaagtagctcctccagctacctactcaagccctccagccaca
ggctatgtgcctcccagaccggactttgtaccatatccatccccagtacctccttcagca
cagagtccaatcagccagtgtcccatgaggccgccttttccaaaccaccaagtaaggcag
agttttccagtccctccttgtttccctcctgctcctccaccagtgccaaatccaggtaat
tccccagtaccaggagcaccttctggacaaaatgcttttccctacatgatgccacctcct
gcaatgcctcatcctccaccaccaccagtgatgccacagcaagttaattatcaacctgtc
tactctacaggctattcacagcagtctttcccacctcctaattttaatagttaccatcat
aattcaaattcctttcagagcagcaacagcaatagcagtagcagtaacagtcatttccgg
cacacaagccaatatcaggtagaaaaagcccaaagcgaacgacggtctccagagaggagt
aagcattacgacgagcaccggcatcgtgaacatggtcacgttcacggagacagacaccgg
tccagtaaccatggagatcggcgggatcgaggcaggagtcctgacaggagaaggcaagaa
agcagtcggcacaggtcagattatgacagaggaaggactccgcctcgccacagaagttat
gaacgaagcagggaacgagagagggaaagacataggcatcgggatagtcgaagatcacca
tcttcagagaggtcctacaaaaaagattacaaaagaacagggagccgatcccccagccga
gagagaaaaagacctcgatgggaggaggagagagagagatggtcagagaatcaaagtgcc
agtaaagagaaaagttacactgctattaaagataaagagccagaggagatcatttcagaa
aaaaacgaagatgaagatgaagaattgcttaagcctgtgtgggttcgttgtacccactca
gaaagctactattcaaatgaccctatggatcaagtgggggactccactgtggttggaaca
agccggctccgagatttgtatgaaaggtttgaggatgagttaggaaaacgacaagcaaaa
gctaaagcagcccggccaccatgggagccaccaaagactaaacttgatgaagatttagag
agctccagcgagtccgactgtgactctgatgacaatagcagctgttctagcagttcagat
tctgaagtatttgatgttattgcggaaattaagcgaaaaaaagctcaccctgatcgtctt
catgaggagctctggtacaatgaccctggacagatgaatgatggacctctgtgcaaatgc
agtgctaaagccagacgaacgggaataagacacagcatttatcctggtgaagagcctatt
aagccatgtcgccccatgaccaacaatgctggaagactatatcactatcgaattacagtg
tcacctcccacgaatttcttaacagacaggccaactgttatagaatatgatgaccatgag
tatatttttgaaggattttctatgtttgcacatgccccactgacaaatattcctctatgt
aaagtaatcaggtttaacattgactatacaattcatttcattgaagagatgatgcctgag
aatttttgtgtgagaggacttgaattattctctttgtatctattcagagatattttggaa
ctctatgactggaatcttataggtccttcatttgaaaacaattcttgttgtccaagattt
catttcatgccacgatttgtgaggtttcttccagatggtgggaaggaagtgctgtcaatg
catcagatactactctacttgttacgatgcaacaaacctttagtcccggaggaggagatt
gccaatatgcttcagtgggaagagctggaatggcagaaatacgcagaagaatgcaaagga
atgatagttaccagtcctggcatgaaacccagttcagttcgtattgatcaattggaccgt
gaacagttcaaccctgatgtgattacttttcccattattgttcactttgggatacggcct
gctcaacttagttatgctggagaccctcaataccaaaaactgtggaagagctatgtgaaa
ttacgccatctgctggctaacagtcccaaagtcaaacaggctgataaacagaaattatct
cagagagaggaggcgctccagaaaatcaggcagaaaaacacaatgagacgagaagtgaca
gtggaattaagcagccaaggattctggaaaactggcattcgttctgatgtctgccagcat
gcaatgatgcttcctgtcctcactcaccatattcgttaccatcaatgtctgatgcatttg
gacaagttgataggctatacgtttcaagatagatgcttgctacagcttgccatgactcat
ccaagccaccacctaaactttggaatgaatccggaccatgcaagaaactccttgtccaac
tgtgggattcgacagcccaagtatggagaccgaaaagttcatcacatgcacatgaggaaa
aagggaataaatactttgataaatattatgtcccgccttgggcaagatgatcctactcct
tccaggattaaccacaatgaacgtttagaatttttgggcgatgctgtggtggaattttta
accagtgtccatttatactatctgtttccaagcctagaggaaggaggattagctacttat
cgcactgccattgttcagaaccagcatcttgctatgttggccaagaagctggaactggat
cggtttatgctttatgctcatggacctgacctctgcagggaatcagatttacgtcatgcg
atggctaactgttttgaagccttaataggagcagtttaccttgagggaagcctagaagaa
gccaaacaattatttggacgtttgctctttaatgacaaggacctacaggaggtatggctt
aattatccactacacccactccaactacaagaatccaacactgatcggcaacttattgag
acttccccagttctccagaagctgacagagtttgaggaggcaattggagtcatatttact
catgttcgtcttctggcgcgggccttcactttgagaactgtgggatttaaccacctgact
ctaggccacaatcagaggatggaattcctgggtgactccataatgcagttggtagccact
gagtacttattcatacatttccctgatcatcacgaagggcacttaacgttgctgcgaagc
tcactggtgaataatagaacacaggccaaagtagcagaagagctgggtatgcaggaattt
gccatcactaatgataaaaccaagagacccgtggctcttcggactaagactttggctgat
ctcttggagtcttttattgcagcactttacattgataaggacttggaatatgttcacact
tttatgaatgtctgtttttttccacgattaaaggaatttattttaaatcaagattggaat
gaccctaaatcccagcttcagcaatgctgtctgactctcaggacagaaggaaaagagcca
gatattcctttgtacaagaccctgcagacagtgggaccttctcatgccaggacatacaca
gtcgctgtgtatttcaaaggagaaagaataggatgtggtaaaggcccaagtattcaacaa
gccgagatgggagctgctatggatgcacttgaaaaatataactttccccagatggcccat
cagaaacggttcatcgaacggaaatacagacaagagttgaaagaaatgaggtgggaaagg
gagcatcaagagagagagacagaggagaccgaggaagtaaggaaataa
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