Carettochelys insculpta (pitted-shelled turtle): 142010355
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Entry
142010355 CDS
T11194
Symbol
PCDH17
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ciz04515
]
142010355 (PCDH17)
Cell adhesion molecules [BR:
ciz04515
]
Cadherins
Protocadherins
142010355 (PCDH17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
142010355
NCBI-ProteinID:
XP_074844775
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Position
1:72278893..72407927
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AA seq
1190 aa
AA seq
DB search
MYLSICCFFFCWAPALSLKNLNYSVPEEQGAGTVIGNIGRDARLQAGPAERGGGRGAKAT
FRVLENSAPHLLDVDGESGLLYTKQRLDREALCRRSARCQLSLEVFANDQEICMIKVEIQ
DLNDNAPAFPAEQVDMDIAENAAPGTRFPLTSAHDPDAGDNGLRTYLLTRDDYGLFALDV
KARGDGTKFPELVVQKPLDREEQSHHTLVLTALDGGDPPRSGTVQLNVRLIDSNDNSPVF
EAASYVVELPENAPLGTAVIDLNATDADEGTNGEVLYSFSGYAPERVRDLFSIDPQSGLI
RVKGNLDYEESGLLEIDVQARDLGPNPIPAHCKVTVRLVDRNDNAPVIGFVSVRQGALSE
AAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGMVPFALEENYDNFYTVVTDRPLDRE
AQDEYNVTILARDGGNPPLNSTKSFSVRILDENDNPPRFSKSLYVLQVPENNIPGEYLGS
VLAQDPDLGQNGTVSYSILPGHVGDVSIYTYVSVNPTNGAIYALRSFNYEQTKHFEFRVL
AKDSGSPHRESNATVRVTVLDVNDNAPLIVLPALINDTAELQVPRNAGVGYPVGTVHALD
SDFGESGRLTYEIVEGNEEHLFEMDPTSGEIRTLHPYWEELSPVAELVVKVSDHGKPSLS
AVAKLIVRALAGPLPEAGEPQVNGEQHRRPHWDLSLPLIVTLSTVSIILLAAMITIAVKC
KRENKEIRTYNCRIAEYSHPQLGGGGGSSGGGGGGSSGGGKGKKKKISKNDIMLVPSEGE
DSRGPLNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHVGCHT
SFTGQGTNSSEAPPSRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGD
SDQADSDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEQQGRGQRPIVGICGPARCEEG
KFSEQEECVNCTDECRVLGHSDKCWMPQFPTTNQAENADYRTNLFVPTVEANVETETYET
VNPTGKKTFCTFGKDKREHTILIANVKPYLKAKRALSPLLQEVPSASSSPNKTCIEPCTS
TKGPLDGCEVKSGAVAEPSSQYLSTDSQYLSPSKQSRNTPFIPSDQMARVFADVHSRVSR
DSSEMDSVLEQLDRSNRDLGRESVDAEEVVREIDKLLQDCRGSDPVAVRK
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctccatttgctgcttcttcttctgctgggcccccgccctgagcctgaagaac
ctgaactactcggtgccggaggagcagggggcgggcacggtgatcgggaacatcgggcgg
gatgcccggctgcaggcggggccggcggagcggggcggcggccggggggccaaggcgacc
ttccgcgtgctggagaactcggcgccgcacctgctggacgtggacggcgagagcgggctg
ctgtacaccaagcagcgcctggaccgcgaggcgctgtgccgccgcagcgcgcgctgccag
ctctcgctcgaggtcttcgccaacgaccaggagatctgcatgatcaaggtggagatccag
gacctgaacgacaacgcgcccgccttccccgccgagcaggtggacatggacatcgccgag
aacgcggcgccgggcacgcgcttccccctcaccagcgcccacgacccggacgcgggcgac
aacgggctgcgcacctacctgctcacccgcgacgactacggcctcttcgcgctcgacgtc
aaggcgcgcggcgacggcaccaagttccccgagctggtggtgcagaagccgctggaccgc
gaggagcagagccaccacacgctggtgctgacggcgctggacggcggcgacccgccgcgc
tcgggcacggtgcagctcaacgtgcgcctcatcgactccaatgacaacagccccgtcttc
gaggcggcctcctatgtggtggagctgcccgagaacgcgcccctgggcacggctgtcatc
gacctcaatgccaccgacgcggatgagggcaccaacggcgaggtgctctactccttcagt
ggctacgcgcccgagcgggtgcgcgacctcttcagcatcgacccccagagcggcctcatc
cgcgtcaagggcaacctggactacgaggagagcggcctgctggagatcgacgtgcaggcc
cgagacctggggcccaaccccatccccgcccactgcaaggtcaccgtgcgcctggtcgac
cgcaacgacaacgcgcccgtcatcggcttcgtctccgtccgccagggggccctcagcgag
gccgccccgccgggcaccgtcatcgccctggtgcgggtcacagaccgcgactcaggcaag
aatgggcagctccagtgccgggtgctggggggcggcgggacaggcatggtgccctttgcc
ctggaggagaactacgacaacttctacacagtggtgacagaccggccgctggaccgtgag
gcgcaggacgagtacaatgtcaccatcctggcccgggatggaggcaaccccccgctcaac
tccaccaagtccttctcggtgcggatcctggatgagaacgacaacccaccccgcttcagc
aagagcctctacgtgctgcaggtgcctgagaataacatccctggcgagtacctggggtct
gtgctggcccaggacccagatctgggccagaatgggactgtgtcctactccattctgccc
gggcatgtgggtgatgtctctatctacacctatgtctccgtcaaccccaccaatggtgcc
atctatgctttgcggagcttcaactatgagcaaaccaagcattttgagttccgcgtgctg
gccaaggactcaggctcaccccaccgtgagagcaacgccaccgtgcgtgtcacggtgctg
gatgtcaatgataatgcgcccctcattgtactgcctgccctcatcaatgacaccgcggag
ctccaggtgccacgcaacgctggtgtgggctaccctgtgggcactgtgcatgccctggac
agtgactttggggagagcggacgcctcacatatgagatcgtcgagggcaatgaggagcac
ctctttgagatggaccccaccagtggtgagatacgtactttgcacccatactgggaagaa
ctgagtcctgtggctgaattggtggttaaggtcagtgaccatggcaaacccagcctctca
gctgtggccaagctgattgtcagggccttggccggacccctgcctgaagccggcgagcca
caggtaaatggagagcaacatcggcgaccacactgggacttgtcgctgcccttgattgta
actttgagtactgtctccatcatcctgctagctgccatgatcaccattgctgtgaagtgc
aagcgggagaacaaggagatccgcacctacaactgccgcatcgctgagtacagccatccc
cagctaggaggcgggggtggtagcagtgggggaggaggaggaggcagcagtggcgggggc
aagggcaagaagaagaaaatcagcaagaatgacattatgctggtgcccagtgagggtgag
gatagcaggggtcccctcaatgtcatgaacgtagtgagcagcccatcgctggccacctca
cccatgtactttgactaccagacccgtctgcccctcagctcacccaggtctgaggtgatg
tatctgaaacctgcctccaacaacctgactgtgccccagggacatgtgggctgccacacc
agcttcacagggcaagggactaactccagtgaggctcccccgagccggatgtccataatt
cagacagacaattttcccgcagagcccaattacatgggcagcaggcagcagtttgttcaa
agtagctccacgttcaaggaccccgaaagagccagcttgagggacagcgggcacggggac
agtgatcaggctgacagtgaccaagacactaacaaaggctcctgctgtgacatgtctgtt
agggaggcactcaagatgaaaactacttcaactaaaagccagccacttgaacaagaacag
caaggcagaggccaaagacccattgttgggatctgtggaccagcccgctgtgaggaagga
aaattttcagaacaagaagagtgtgttaattgcacagatgaatgcagagtgctgggtcat
tctgacaagtgttggatgccacagttccctacaaccaatcaggctgaaaatgcagattat
cgcacaaatctctttgtacccacagttgaagctaacgttgagactgagacttacgaaact
gtgaatcccactgggaaaaagactttttgtacatttgggaaagacaagcgagagcacact
attctcattgccaatgttaaaccttatttaaaagccaaacgtgccctgagtcctcttctt
caggaggttccctcagcatcaagcagcccaaacaagacatgcattgagccttgcacctca
acaaaaggaccattggatggttgtgaagtgaaatcaggagccgtggctgaaccaagcagc
cagtacttgtcaactgacagtcagtatctgtcacctagtaaacagtcaagaaacactcca
ttcattccatcagatcagatggctagggtctttgcagatgtacattcccgagtgagccga
gactcaagtgagatggactctgttctggagcagttagaccgttcaaatcgggatctaggg
agagaatccgtggatgcagaggaagttgtgagagaaattgacaagcttttacaggactgt
cgtgggagtgacccagtagctgtgagaaagtaa
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