Carettochelys insculpta (pitted-shelled turtle): 142010478
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Entry
142010478 CDS
T11194
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142010478 (PRDM1)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
142010478 (PRDM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
142010478
NCBI-ProteinID:
XP_074844934
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Position
3
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AA seq
787 aa
AA seq
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MKMDMEDADMTLWTEADFEEKCTYIVNDHPWDSSADGSTTTQAEASLPRNLTFKYASNCK
EVTGVVSKEYIPKGTRFGPLVGEIYTSDTVPKNANRKYFWRIYSSGELHHFIDGFNEDKS
NWMRYVNPAHSVQEQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFAERLHYPSSRDL
MMNLTQSHINPKEQSTDKNELYQKSIPKREHSVKEILKTEPNHSKGKDLFQINISPVIPE
KQLDDLRKNCSPERSFFPRVVYPIRPHIPEDYLKASLLYGLERPSYITHSPIQSSTTPSP
SGRSSPDQSLKSSSPHSSPGVTVSPLAPTSQEQRESYPYLNGPYGSEGLGSYPGYAPSSH
LSPAFLSSYNSHYSKFLLPPYSMSCNNLSALNNISGINNYNLLPRMYPLYSNLLSGGNLP
HHVLSPAALPSSLPHEGGRRLLQPDHPRDFLIPAPNSAFSITGAAASMKDKQCSPTSGSP
TAGTAATSEHIMQPKPTSAVLAATSEEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYECN
VCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHK
RFSSTSNLKTHLRLHSGEKPYQCKLCPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYIH
LCSLKVHLKGNCPVAPASGLSMEDVNRINEEIEKFDISDSADRLEDVEDNIDMASVVEKE
ILTVLRREMEGASLKVSLQRNMGNGLISSGCNLYESSDMSIMKLPHGHPLPLLPIKVKQE
TVEPMDP
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacatggaggacgctgacatgactctgtggacagaggctgattttgaggag
aagtgcacatatattgtcaacgatcacccctgggattccagtgctgatggaagcacgaca
actcaggcagaggcatccttgccaaggaacttgacttttaaatatgcatcaaactgcaaa
gaggtgactggagttgtaagtaaagagtacatcccaaaaggaacgcggtttggacccctg
gtaggagagatctataccagcgatacagttcccaagaatgcgaacagaaaatacttttgg
cggatctattccagtggtgagcttcaccacttcattgacggatttaacgaggacaagagc
aattggatgcgctatgtgaacccagcccattccgttcaggaacagaatttggcggcttgt
cagaatggaatgaacatctatttctacactatcaagcccatccctgcaaaccaagaacta
cttgtgtggtattgtcgggactttgcagagagactgcactatccttcctccagagatctg
atgatgaatctaacacaaagccacattaatccaaaagagcaaagcactgataaaaatgaa
ctttatcagaaaagtatcccaaagagagaacacagtgtgaaagaaatcttgaaaactgaa
ccaaaccattcaaaaggaaaggacttattccagattaacatttcaccagttattccagaa
aaacagttggatgacttgagaaaaaactgtagtcctgaaaggtctttctttcctcgtgtt
gtctatccgatccgacctcacattccagaagattatttaaaagcttccctactttatggg
ctggaaagaccaagctacattactcactcacccatccaatcttctaccacaccaagtcct
tcaggaagaagcagcccagaccaaagcttaaaaagctcaagtccacacagcagtccaggg
gttacggtttcacctctggcacctacttctcaagaacagagagaatcttacccatacttg
aatggaccttatggctcagagggcttggggtcttatcctggatatgcaccctctagccat
ctctccccagcttttttatcctcttataattcccactattcaaaattcctgttacctcca
tacagtatgagctgtaataacctgagcgctttgaacaatatcagtggcatcaacaattac
aatctgttgccaaggatgtatcctctctatagcaacctactcagtggaggaaaccttccc
catcatgtgctgagcccagctgctcttccaagttctttgccccatgaaggaggccgtcga
ttgctacaacctgatcatccaagagactttctcataccagcacctaacagtgccttttcc
atcacaggtgctgctgccagcatgaaagacaaacaatgtagccccaccagtgggtccccc
acggctggcacagcagccacttcagaacacatcatgcaaccgaaacctacctcagcagtg
ttggctgccacaagtgaagaagccatgaatctcattaaaagtaagaggaatgtgaccggt
tacaaaacccttccatatccactgaagaagcagaacgggaagatcaagtatgaatgcaat
gtttgctccaagacctttggccagctctccaatctgaaggtccacctcagagtacatagt
ggagagagaccattcaaatgtcagacttgcaataaagggttcactcagctggctcacctc
cagaagcactatctggtacacacaggagaaaagcctcatgagtgtcaggtctgccataag
cgattcagcagcactagcaatcttaagacacacctgcgactccactctggagaaaagcct
tatcagtgtaagctgtgccctgctaaattcacccagtttgtgcacttgaagctacacaag
cgtctccataccagggaacggccacacaagtgcatccattgccacaagagctacattcac
ctctgcagcctcaaagtccatcttaaaggcaactgccctgtagcccctgcctctggcctc
tcaatggaggacgtgaatcgtatcaatgaagagattgagaagttcgacatcagtgacagt
gctgacaggttggaagacgtggaggacaatattgatatggcatctgttgttgaaaaagaa
atactgacagtgctcagaagagagatggaaggggctagtcttaaagtatctttgcagagg
aacatgggaaatgggcttatctcctcaggatgtaatctttatgaatcttcagacatgtca
attatgaagttgcctcatggtcatccactacctctgttgcccataaaggtcaaacaagaa
acagttgaaccaatggacccttaa
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