Carettochelys insculpta (pitted-shelled turtle): 142011063
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Entry
142011063 CDS
T11194
Symbol
NVL
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
142011063 (NVL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ciz03009
]
142011063 (NVL)
Ribosome biogenesis [BR:
ciz03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
142011063 (NVL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_2
TIP49
AAA_14
AAA_28
NPHP3_N
nSTAND3
AAA_33
Mg_chelatase
RNA_helicase
AAA_18
AAA_17
ABC_tran
NACHT
Viral_helicase1
TsaE
Rad17
Vps4_C
IstB_IS21
ATPase
AAA_3
NB-ARC
Zeta_toxin
Sigma54_activ_2
Parvo_NS1
DUF815
TBPIP_C
Motif
Other DBs
NCBI-GeneID:
142011063
NCBI-ProteinID:
XP_074845999
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All DBs
Position
3:56069231..56158952
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AA seq
858 aa
AA seq
DB search
MRGRAGSFADPRLKQRIKQYLSSNKCGKYVDIAVLAADLQKTYSAEYGRRKRNAFRIQVE
KVFGIISNEREFEDLTTLENEHAAKRARHRQEEDEDVESYTGDSDDDYPESSSTNHLNSS
LLTLYRKGDPDSCPATPKNGSTETSTPAQVIAPKTSALSSETPLDTRISKGGWFIDKTPG
RQESNFLIDLCEEEEERKHISEKSKDLSLLESEGKKTKGKRRKRRKEDSQDADEEIESVL
RKKKVRTKGPELQFSLVKFEDVGGNDETLKEVCKMLIHMRHPEVYNHLGVVAPRGFLLHG
PPGCGKTLLAQAIAGELELPMLKVAATEIVSGVSGESEQKLRELFEQAVSNAPCILFIDE
IDAITPKREVASKDMERRIVAQLLTCMDDLNNMTSSAQILVIGATNRPDSLDPALRRAGR
FDREICLGIPDEAARERILQTLCRKLRLPESFNFHYLAHMTPGYVGADLMALCREAAMCT
VNRVLIKLEDQKWKGVQSREARTKQSLETGTEALVEQDTTHPALPTKGELQRLLDLLKEQ
DPLPEEQLQTLCIEMNDFIVALSSVQPSAKREGFVTVPDVTWADVGALEDVREELTMAIL
APVRNPEQFKALGLTAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGE
SERAVRQVFQRARNSAPCVIFFDEVDALCPRRSDREGGASVRVVNQLLTEMDGLEHRRQV
FIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPVDRLAILKTITKDGTRPPLDVDVNLEE
IAYDQRCDCYTGADLSALVREASVCALRQEMALQNGKSKKGEIKIGQEHFEEAFKKVKSS
ISRKDQAMYEELRQSLST
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgcggggccgtgcggggagtttcgcggaccctcgtctgaagcagcgaatcaagcagtac
cttagcagtaataaatgtggcaaatatgtggacattgcagttttagctgctgatttacag
aaaacttacagtgcagaatatggacgaagaaaaagaaatgcttttagaattcaagttgag
aaagtatttgggataatcagtaatgaaagagaatttgaagatttaacaactttagaaaat
gaacatgcggcaaaaagagcaagacacagacaagaagaggacgaagatgtggaaagctac
acaggcgactcagatgatgattacccggaaagttcgtccacaaatcacctgaacagttct
ctgctaactttataccggaaaggagatcctgattcttgcccagcaactccaaagaatggg
tcgacagaaaccagtacccctgcacaagtgatagcacccaaaacaagtgctctttcatct
gaaaccccacttgatactagaatctctaaaggtggttggtttattgataaaactccaggc
agacaagaaagcaactttttaattgacctgtgtgaggaagaggaggaaaggaaacatatt
tctgagaaatcaaaagacctttctttactggagagtgaagggaagaagacaaagggtaaa
agacgaaaaagaagaaaagaggactctcaagatgcagatgaagaaatagaatctgttttg
cgtaagaagaaagttagaactaaaggaccagagctgcagttctctttagtgaaatttgag
gatgttggaggcaatgatgaaactctgaaggaggtatgcaagatgctgatacacatgcgt
caccctgaagtatacaaccacttaggagtggttgcaccacgaggatttcttctacatggg
ccaccagggtgtggaaagacattactagcccaggcaattgctggggaactcgaactgccg
atgcttaaagtagctgctactgaaattgtatcaggagtgtctggggagtctgaacagaaa
ctgagagagttgtttgaacaagctgtgtccaatgcaccatgcatccttttcatagatgag
attgatgcaatcactccaaaaagagaagttgcatcgaaagacatggagcggagaattgtc
gcccagcttttaacctgtatggatgacctgaataatatgacttccagtgctcagatccta
gtcattggagctactaacagaccagactcgctggacccagcgttgaggcgcgctggaaga
tttgacagagaaatttgcctagggattcctgatgaagcagctagagagagaattctacag
actttgtgtcgaaaactgaggctccccgaatcttttaattttcattatttagctcatatg
actccaggctatgttggcgctgatttgatggcactttgtcgtgaagcagctatgtgtaca
gtaaacagggtcctgataaagttggaggatcagaagtggaaaggtgtacagtctagagaa
gcaaggactaaacaaagcttggagactggaacagaagcactggtagaacaagatactaca
catccagcacttcctactaagggtgaattgcagaggctgctggatttgctaaaagagcaa
gatcccctaccagaagagcagttgcagacgctctgcattgaaatgaatgatttcattgtt
gcactgtcttcagtacagccctctgccaagagagaaggctttgtcacagtccctgatgtg
acatgggcagatgttggagccctggaggatgttcgggaggagctcaccatggcaattctg
gcacctgtgcggaatccagagcagttcaaagctcttggcctgacagctccagctggtgtg
ttacttgcagggcctcctggatgtggcaaaacgctcctggcgaaggctgtggccaatgag
tctggattgaacttcatctctgtgaaaggtcctgaactattaaatatgtatgttggtgaa
agtgagcgtgctgtacgtcaggtattccagcgagccagaaattcagccccttgtgttata
ttcttcgatgaagttgatgctttgtgccctcggagatcagaccgtgagggaggtgccagt
gtccgtgtggtaaaccagttgctaacagagatggatggtctggaacatcgtcggcaggtt
ttcattatggctgctaccaacaggccagatataattgacccagctatactgcgccctggt
agacttgataaaacactctatgtgggtttgccaccacctgtggatcgacttgctatttta
aagaccatcaccaaagatggtacccgaccccctttggatgttgatgtaaaccttgaagaa
attgcttatgatcagcgttgcgattgctatacgggggcagatctttctgctttggtgcgt
gaagcttcagtctgtgccttgaggcaagaaatggccctacagaatggcaaaagcaagaaa
ggagagatcaagattggccaagaacactttgaagaagcatttaagaaagtgaaatcatct
atatcgagaaaggatcaagcaatgtatgaagaactgcgtcagtcactgagcacatga
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