Carettochelys insculpta (pitted-shelled turtle): 142011232
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Entry
142011232 CDS
T11194
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142011232 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142011232 (ARID1B)
03021 Transcription machinery [BR:
ciz03021
]
142011232 (ARID1B)
03036 Chromosome and associated proteins [BR:
ciz03036
]
142011232 (ARID1B)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Helix-turn-helix
ARID
142011232 (ARID1B)
Transcription machinery [BR:
ciz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
142011232 (ARID1B)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
142011232 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
142011232
NCBI-ProteinID:
XP_074846420
LinkDB
All DBs
Position
3:complement(89957674..90420142)
Genome browser
AA seq
2447 aa
AA seq
DB search
MIMAAQVAAAPAGAKNNKGKAPSLPGSLSQDLSAGGAAAAATGAGSMLGVGDGTTGGSLN
NVDHPLLHHHNELNMANSATSAAAATAAAATGNNSTNANPSGGGGSSSESALKEGGSSSG
LPSSSPSASSSASASSSSSKPGSAMETGLLPNHKLKAVGGDHPAAPPHHHHAHHPHHHGH
HHHGHHHHHALQQPLNPFPPPPQHHPMQNNNSLGGGGAGSSSNNNTGGGGAAQPSADMEQ
QQHGGKDGVLGNQAEPPPPLLNKGGEEEELPGKLGEQVGGRYEHPSLGPLGGQQPPPPQS
AGSGGGTSSLGGGSGGGGGPSAVGVSEFNSYYGNPAPASSATASRAGPCFDQHGGQQSPG
MGLMHPTAAPNSMDPLQNSHEGYPNSQYNHYPGYGRPGGGAAAAGAGAAAAGGGGGGGGG
GGGYGGSSSSYGVLSSPRQQGSGMMMGPGGGAGLGKAAASSGAGGFQRFSGQNQHPSGAT
PTLNQLLTSPSPMMRSYGSSYPDFSNPSAPPQQQPQAQAGAAAPGSQQATAGMGMGKDMG
AQYGSANAAWAAAAQQRAHPAMSPGSTGQSISRTQGSPMDPMVMKRPQLYGMGNNPHSQT
QQSSPYPGQSYGPPGPQRYPMGMQGRTSGALGGMQYPQQQMPSQYGQQGVSGYCQQGQQP
YYNQQPQPQHLPPQAQYLSQAQQRYQTQQDMSQEGYGTRSQPPIASGKPNHEDLNLIQQE
RPSSLPVEVLALEDAAFGLKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSNPAQSP
FSPHASPHLSGIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGSQSESSSHP
ALSQSPMPQDRGFMAGIQRNPQISQYGPQQTGPSMSPHPSPAGQMHPGIGSFQQSNSSGT
YGPQMSQYGPQGNYSRPSTYSGVPNASYSGPGPGMGMNANSQMHGQGPSQPCGTMPLGRM
PSAGMQSRPFPGNIGSMTPNSPGMSLQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQS
RPPYIRSPAYPSQSGAGGRPMFSSQHPNYGNAQAPMMHQPDQYGQGSFPGMNQSGIMGSS
SPYSQPMNNSSGLMNAQAPPYSMTPNMVNSSTAPMGLADMMTPGESKLPLPLKADGKEEG
PPQHESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGWPKTPS
SPKSSSSTTTGEKITKVYELGSEPERKMWVDRYLTFMEERGTPVASLPAVGKKPLDLFRL
YVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPP
PEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDLKPPTPASTPHGQM
TPMQGSRNSAVSVHDPFSDISDSAFPKRNSMTPNAPYQQGMNMPDMMGRMPYEPNKDPFG
GIRKVPGSNEPFMAPGQMPNSGIQDIYNQTPSGAMSTMSMSQRQQFSYGSGYDRRSDHGL
GPEGSMGPTGQSNMVPSNSDPSMYSPNRYPGQQRHEPYGQQYPGQGPPSGQPPYGGPQSG
MYPQQQNYKRHMDGMYGPPTKRHEGDMYNMQYGNQQQDMYNQYSNTYSGPDRRPIQGQYP
YPYNRERMQGPGQMQQHGIPPQMIGGPMQSSSTSEGPQQNMWPTRNDMPYPYQTRQGPGG
PAQAPPYPGMNRTDDLMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQT
PPSMPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVIPTVPVSQVTGPPPQPPPI
RREITFPPGSVEASQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILL
YDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPGHKALDHKAVKKDDSQ
SLAVNTGKEEENDECIDYFDEEEEEDEEEDENDKTEEEKSTVFATPSAIADPSERPKQAS
KFDKLPIKIVKKNNLFVVDRSDRLGRVQEFSSGLLHWQLGGGDTTEHIQTHFESKMEIPP
RRRAPPPLNSPTKKKDLEGKGESEEQQEKSITATIDDVLSARPGALPEDANPCSQTESSK
FPFGIHQAKSHRNIKLLEDEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFVPGND
AEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEEEDKGVACSKDEWWWDCLEVLRD
NTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLV
LETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLAQGD
TLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKAL
LAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
7344 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggccgcgcaagtagcagcggctccggcgggggcgaagaacaacaagggcaaa
gccccgagtttgccgggcagcttgagccaggatctcagcgctgggggagcagccgccgcg
gccaccggagcaggctccatgctgggggtcggagatgggacgaccggcggcagcctgaat
aatgtagatcaccctctcctccaccaccataatgaactgaacatggccaatagtgcaact
tctgctgctgctgctactgccgccgccgccaccgggaataacagcaccaacgcgaacccc
agcggcggcggcggctcttcctcggagtcggctctgaaggaaggtgggagctcatcgggg
ttaccttcttcttctccttctgcttcttcctccgcctccgcctcctcctcctcctccaag
ccgggctcggccatggagacggggctgctccccaaccacaaactgaaagccgttggaggc
gatcaccccgccgcaccgccccaccaccaccatgcccaccaccctcaccaccacggccac
caccaccacggccaccaccaccaccatgccctgcagcagccgctgaaccccttcccgccg
ccgcctcagcaccatccgatgcagaataacaacagcctcggcggcggcggcgccggcagc
agcagcaacaacaacaccggcggtggcggcgctgctcagcccagtgcagacatggagcag
cagcaacatggaggaaaagacggtgttttggggaaccaggccgagcccccgccgccgctg
ctgaataaagggggcgaggaggaagagctgcccggcaagttgggcgagcaggtcggcggc
cgctacgagcaccccagcctgggacctttgggcgggcagcagccgccgccgcctcagagc
gccgggagcggcggcggcacgagcagcctcggcggcgggagcgggggaggcggcggcccc
tcagcggtgggtgtctcggagtttaatagctattacggtaaccctgcccctgccagcagc
gctaccgccagccgagccgggccttgctttgatcaacatggcggacaacaaagccccggg
atggggctgatgcaccccacggccgcccccaacagcatggaccccctgcagaactctcac
gagggttaccccaacagccagtacaaccactaccccggctacggccggcccggcggcggc
gccgcagcggcaggagcgggcgcggcggcggcgggaggaggtggaggaggaggcggcggc
ggcggcggctatgggggctcgtcctctagctacggggtgctgagctccccccggcagcag
ggcagcggcatgatgatgggcccgggcggaggggccggcctcggcaaggctgccgcgagc
tctggggccggaggcttccagaggttttccgggcagaaccagcacccgtccggggccacc
cctaccttgaaccagctgctcacttcccccagccccatgatgaggagctatggcagcagc
taccctgatttcagcaaccccagtgccccgccacagcagcagccgcaagcccaggcagga
gcggcggccccaggaagccagcaggcaacggcgggcatgggcatgggcaaagacatgggc
gcccagtacggatctgcaaacgcagcctgggcagcagcagcacaacaaagagctcaccca
gctatgagccctggaagcactggtcagagcatcagcagaacccagggcagcccaatggat
ccaatggtaatgaagagacctcagttatacggaatgggtaataatcctcattctcagaca
cagcaaagcagtccatatccagggcagtcatatggccctccaggacctcaacgatatcca
atgggaatgcagggacggacctcgggagcccttggaggaatgcagtatccacaacaacag
atgccgtctcagtatggtcagcaaggcgtaagtggctactgccaacagggtcaacagcca
tattacaaccagcagccgcaacctcagcatctgccgccccaggcccagtatttgtcgcag
gcccagcagaggtaccagacacagcaggacatgtctcaggaaggctatggaaccagatcc
caaccccctatagcctcaggaaagcctaaccatgaagatttaaacctaatacaacaagaa
aggccatcaagcttaccagttgaagtcttggccttggaggatgctgcatttggactgaag
gatttatccggctccattgatgacctgcccactggaactgaagcaacactgagttcagca
gttagtgcatcaggctctacaagtagccaaggagagcagagtaaccctgcacagtcaccc
ttctcccctcatgcttccccacatctctctggaataccagggggtccatcgccttcccct
gtaggctcacctgttggaagcaaccaatcaagatctggtccaatttctcctgcaagtatt
ccaggtagtcagatgccacctcagcctcctggtagccagtcagagtccagctcccatcct
gccttgagtcagtcaccaatgccacaagatcgaggttttatggcaggtatacaaaggaat
ccacaaatctcccaatatggacctcaacaaactgggccttccatgtcacctcatccttca
cctgcaggccaaatgcatcctgggattggtagtttccagcaaagtaattcaagtggtact
tatgggcctcagatgagccaatatggaccacaaggaaactactccagaccgtcaacatac
agcggggtgcctaacgcaagttacagtggcccaggacccggcatgggtatgaatgccaat
agtcagatgcatggacaggggccaagccagccatgtggtaccatgcccctgggacggatg
ccgtcagctgggatgcagagcagaccgtttcctggaaacataggcagtatgacccccaat
tctcctggcatgtctctgcagggtggtcctgggatgggcccacccatgccaaccgtgaac
cgtaaggcacaggaggcagctgctgcagtgatgcaggcagctgcaaactccgctcagagc
aggccaccatacattaggtcgcctgcttatcccagccagtctggggctggcggacgcccc
atgttttcttcacagcaccccaactatggcaacgctcaggctcccatgatgcaccagcct
gaccagtacgggcaaggcagttttcctggcatgaatcaaagtggtattatgggatccagc
tctccctactcgcagccaatgaacaacagctctggcctgatgaacgcacaagctcctcct
tacagcatgacacctaacatggtgaacagttcaacagcacctatgggtcttgcagatatg
atgacacctggtgagtccaaactgccccttcctctcaaagcagatggcaaagaagaagga
cctccacagcacgagagcaagtcaaaggatagctacagctctcagggtatttctcagccc
ccaaccccaggcaacctgccagtcccttccccaatgtccccaagctctgctagcatctcc
tcatttcatggagatgaaagtgatagcattagcagcccaggctggccaaagactccatca
agccctaaatcaagttcctccaccacaactggagaaaagatcacaaaagtctatgagctg
ggaagtgagccagaacgcaagatgtgggtggatcggtatctcaccttcatggaggaaagg
ggcacgcctgtggccagtctgccagctgtaggcaagaagcccctggacctgttcaggcta
tatgtctgtgtcaaagagattggcggtttagcacaggttaataaaaacaagaagtggcgc
gagttggcaactaatctgaatgttggcacttcgagcagtgcagccagctccctgaaaaaa
cagtatattcagtacctgtttgcctttgagtgtaagattgaacgaggggaggagccccct
ccagaagtcttcagcactggagatactaagaaacaacctaagattcaaccgccatctcct
gctaattctggttccctgcaaggtccccagactccccagtctactggtagcaattccatg
acagaagtgccaggcgacctaaagcctccaacaccagcatcaacacctcatggacagatg
acacccatgcagggcagcaggaacagtgcagttagtgtgcacgatcccttttctgatata
agtgattcggcgtttccgaaacgaaactccatgacgccaaatgcgccataccagcagggg
atgaacatgccagatatgatggggaggatgccctatgaaccgaataaagacccttttggt
ggtataagaaaagtgcctggaagcaatgagcccttcatggcccctggacaaatgcccaat
agtggaatacaggatatctataaccagactccttctggagcaatgtccaccatgagcatg
agccagcggcaacaattctcttacggaagtggctatgacaggaggtcggatcatgggctg
ggtcctgaaggcagtatgggaccaactggtcagagcaacatggtgccttcaaacagtgac
ccaagcatgtactctcctaatcgttaccctggccagcagaggcatgaaccatatgggcag
cagtatccagggcaaggacctccttcaggacagccaccgtatggaggacctcaatctgga
atgtatccacagcaacagaactataagcgtcatatggatggcatgtatgggcctccaaca
aaacgccatgaaggggatatgtataacatgcagtatggcaatcagcagcaagatatgtat
aaccagtacagcaacacttactctggaccagacaggaggcctatccagggacagtatcca
tatccttacaacagggagaggatgcagggccctggacaaatgcagcagcatggaataccc
ccgcagatgattggtggccccatgcagtcatcatccaccagtgaaggtcctcagcagaac
atgtggccaacacgaaatgatatgccttacccttaccagactaggcaaggccctggaggc
cctgcacaggccccaccgtatccagggatgaaccgcactgatgatctgatggtacctgac
cagaggataaaccatgagagtcagtggccttctcatgtcaatcagcgtcagccttcttat
atgtcatcctccgcctccatgcagccaatcactcgacctcctcagtcgtcctaccagaca
ccaccttcaatgccaaaccacatctctagggctccaagtccagcatccttccagcgctct
ttggagaaccgtatgtctccaagcaagtcccctttcctcccctccatgaagatgcagaag
gttatacccacagttccagtgtcacaagtcacaggtcctccaccccagccaccaccaatt
aggcgagaaattacttttcctccaggctctgtagaagcatcacaaccagtcttaaaacca
agacgaaagattacctcaaaagatattgtaactcctgaggcctggcgagtgatgatgtct
cttaaatctggccttttggctgaaagtacctgggctctagacactattaatattcttctg
tatgatgacagcactgttgctactttcaatctttctcagttatctggatttcttgagctt
ttggtagaatattttagaaaatgcctaattgacatttttggaatccttatggaatatgaa
gtgggcgatccaggtcacaaagcacttgatcacaaagcagtcaagaaggatgacagccag
tccttggcagtaaatactggaaaagaggaggaaaatgatgaatgtattgactactttgat
gaagaggaggaggaggatgaagaggaagatgaaaatgacaaaacagaagaagaaaagagc
actgtttttgccactcccagtgccattgctgatccaagcgagaggccaaagcaagccagt
aagtttgacaagctgccaataaagattgtaaagaaaaataatctctttgttgttgataga
tctgacagactggggcgtgttcaggaattcagcagtgggcttctccactggcagctgggt
gggggtgataccactgaacacattcagactcactttgaaagcaagatggagattcctccc
cgaaggagggcccctccacccttgaactctccaaccaaaaagaaggatctggagggaaaa
ggtgaatctgaagagcaacaggaaaaaagcataacagctaccatcgatgatgttctgtca
gctcgaccaggagcattgcccgaagacgcaaatccttgttcccaaacagagagcagtaaa
tttccctttggtatccatcaagccaaaagccaccggaatattaaattgttagaagatgag
ccaaggagccgggatgagactcctctatgcaccataactcattggcaagattccttggct
aaacgctgcatctgtgtgtcaaatattgtccgtagcttgtcttttgtgcctggcaatgat
gctgaaatgtccaaacatccaggcttggtgctgattctgggaaagttgatcctacttcac
catgagcatccggaaagaaagcgagcaccacagacatatgagaaagaggaagaggaggac
aaaggggtggcctgcagcaaggatgagtggtggtgggactgcctcgaggtcttgagggat
aatacattggtcacattagccaacatttctgggcagctagacttgtctgcttacacagaa
agcatctgtttgccaattttagatggcttgctgcactggatggtgtgcccatctgcagag
gcacaggatccttttccaaccgtggggcccaactcagtcctatcgcctcaaagacttgtg
ctggagaccctctgtaagctcagtatccaggacaataatgtggaccttatcttggccact
cccccattcagtcgtcaggagaaactctacgctactttagttaggtacgttggggaccgc
aaaaacccagtctgccgagaaatgtccatggctctcttatcgaaccttgcccagggggac
acgttagcagcgagggcaatagctgtgcagaagggaagcatcggaaacttgataagtttc
ttggaggatggggtcactatggcccagtaccaacagagccagcataacctcatgcacatg
cagcctccaccactggagccacctagcgtagacatgatgtgcagagcagccaaggccttg
ctggccatggctagagtggacgaaaaccgctcagagttccttttgcatgagggtcgtttg
ctggatatttcaatatctgctgtcctgaactctctggttgcatctgtcatctgtgatgta
ctttttcagattgggcagttatga
DBGET
integrated database retrieval system
