Carettochelys insculpta (pitted-shelled turtle): 142011367
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Entry
142011367 CDS
T11194
Symbol
COL10A1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
142011367
NCBI-ProteinID:
XP_074846809
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Position
3:119714582..119734193
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AA seq
677 aa
AA seq
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MQLQTPFLLLLSLNIVHGGDGFFSERYQKQASMKGPHFLPFNVKSRGLQGMREQGPPGPP
GPAGPRGQPGPPGPPGYGSPGPQGPPGPPGPPGFSAVGKPGLPGLPGKPGERGLNGEKGD
IGPAGLPGSRGPQGPPGIPGPAGISVAGKTGEHGPPGAQGPRGIPGQKGEPGIPGINGLK
GENGYGVPGRPGDRGLPGPQGPPGPPGLAGIGKPGENGFPGQPGVKGDRGLPGAPGPAGI
PGSQGLPGEPGPVGIGKPGANGPPGLPGIPGAKGLPGPPGMPGSPGLPGFGKPGLPGMKG
HRGPEGLPGIPGIKGDQGPAGVPGEPGPSGPPGNMGPQGLRGIPGENGLPGPKGEAGPAG
LAGYPGAKGDRGLPGLDGRPGYPGEQGLAGPKGPPGLPGPKGDNGHVGPPGLTGPMGAPG
LKGAPGFNGEPGPRGPSGIPGIRGPIGPPGIPGFPGTKGEPGAPGLPGPAGIATKGLNGP
MGPPGLPGPRGNNGEPGLPGPPGPPGPPGQSILPQMPDSYIKAGESQGLTGMPLMKAGVN
QGLTGMPISAFSAILSKAYPGATVPIKFDKILYNRQQHYDPRTGIFTCRIPGLYYFSYHI
HVKGTNVWVALFKNGSPIMYTYDEYKKGYLDQASGSAVIDLMENDQVWLQLPNAESNGLY
SSDYVHSSFSGFLFAHM
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcagctacaaacaccttttctgttgctgctttctctgaacattgtccatggtggtgat
ggctttttttctgaacgataccaaaaacaagccagcatgaaggggccacatttcctacca
tttaatgtaaaaagtcgaggtttacagggaatgagagaacaaggacctcctggtccacca
ggtcctgcaggcccaagaggacaaccaggcccgcctgggccaccaggctatggaagtcca
ggtcctcaaggtccaccaggcccccctggcccaccaggattttctgctgttgggaagcca
ggcttacctggtttaccaggaaaaccaggagaaagaggattaaatggtgaaaaaggagat
attggacctgctggtctcccaggatcaagagggccacagggacctcctggaattcctggt
cctgctggaatctctgttgctggcaagacaggagaacatgggccaccaggagcacaaggg
ccacggggtatccctggtcaaaagggtgagccaggtattcctggcataaatggtctaaag
ggagaaaatggatatggagttccaggtcgcccaggtgacagaggacttccagggccacag
ggccctcctgggccccctggacttgctggtatagggaaacctggtgaaaatgggtttcca
ggtcagccaggtgtgaaaggtgatcgaggtttgccaggtgcaccagggccagcaggtatc
ccaggttcacaaggtcttcctggggaacctggaccagtaggaattggaaagcctggagca
aatggaccaccaggattgccagggattcctggagcaaaaggactgcctggacccccaggc
atgcctgggtccccaggtcttccaggatttggaaagccaggtttgccaggaatgaaagga
cacagaggacctgaaggccttcctggtattccaggaatcaaaggggatcaaggccctgct
ggagttccaggagagccagggccatctggaccacctggaaatatgggtcctcaaggactt
agaggaataccaggtgaaaacggcctacctgggcctaaaggtgaagcaggacctgcaggc
cttgcaggatacccaggagctaaaggtgacagaggcctaccaggattagacggaaggcca
ggatatccaggggagcagggccttgctggtcctaaaggaccgccaggtttgccaggtcct
aaaggggacaatggccatgttgggccacctggcctaactggtccaatgggtgcaccagga
cttaaaggagcaccaggatttaatggtgagccaggcccaagaggaccttctggaatacct
ggtataagaggtcctattgggccacccggcattccaggatttccaggcactaaaggggag
cctggggcaccaggattaccaggtccagctggcattgctacaaaaggtttaaatggacct
atggggccccccgggctcccaggcccaagaggcaacaatggagagcctggattaccaggc
cctccaggtccacctggtcctcctggacaatcaattctcccacaaatgccagacagttat
ataaaagcaggagagagtcaaggcctgacaggaatgcctcttatgaaagcaggagtaaac
caaggtctaactggaatgccaatatcagctttctctgccattctctccaaagcctaccct
ggagccacagtccccatcaaattcgataaaatcttgtacaatagacagcaacattatgac
cccagaacaggaatctttacatgtaggatcccaggactttactatttttcataccacata
catgtaaaaggaacaaatgtttgggttgccctattcaaaaacggctccccaatcatgtat
acctatgatgagtacaagaaaggataccttgaccaagcttctggaagtgctgttattgat
ctcatggaaaacgatcaagtctggttgcagttgcccaatgcagaatctaatggcttgtat
tcttctgattatgttcactcctctttctcaggatttttgtttgctcatatgtga
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