Carettochelys insculpta (pitted-shelled turtle): 142011652
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Entry
142011652 CDS
T11194
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz00100
Steroid biosynthesis
ciz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
142011652
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ciz01006
]
142011652
Enzymes [BR:
ciz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
142011652
Prenyltransferases [BR:
ciz01006
]
Terpene biosynthesis
Squalene/phytoene synthase
142011652
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
DUF4073
HAUS4
Motif
Other DBs
NCBI-GeneID:
142011652
NCBI-ProteinID:
XP_074847591
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Position
3:206781203..206803119
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AA seq
460 aa
AA seq
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MAASTKAAALFKRTLALSPPRGPGGQRCCSSSSPPRPLPGGGLRGAGRLLHQGAPPGACP
ASPRFQQPPAPLLRPQDALSDSLRTCYRYLNQTSRSFAAVIQALDGELRHAVCIFYLVLR
ALDTIEDDMTINLETKVPMLHDFHSYLYQTDWRYMESKEKDKQVLEDFPTISLEFRNLAQ
VYRDVIADICHKMGIGMAEFLEKKVDSQQEWDKYCHYVAGLVGIGLSRLFSASELEEPIV
GQDTELANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWGRYVKKLSDLAKPENIDVAVQ
CMNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLAACYNNKQVFRGVVKIR
KGQAITLMMDATNIQAVKTIMYQYVEEISRKVPSGDPSSSKTQQIIVSIRTTNLPNSAVV
TRNHYSPFYLSFAMFLAALSWRYLSTMSKASEEYVQASEN
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggccgccagcaccaaggccgcggccctcttcaagcgcacgctggcgctgtcccccccg
cggggccccggcgggcagcgctgctgctcctcctcctccccgccgcggccgctgccgggg
ggcgggctccgcggggccggccgcctgctgcaccagggcgccccgccgggggcctgcccg
gcctcgccccgcttccagcagccgccggcccctctgctccgcccgcaggacgcgctcagc
gacagcctcaggacctgctaccggtacctgaaccagaccagccggagcttcgccgccgtc
atccaggcgctggacggggagctgcgtcatgctgtgtgcatattctacctggttctccga
gctctggacactatagaagatgatatgaccatcaatttagaaaccaaggtcccaatgttg
catgacttccactcctatttgtatcagacggactggagatacatggaaagcaaggagaag
gacaagcaagtgcttgaggacttcccaacgatctctttggagttccggaacctagcgcag
gtgtatcgggacgtgattgcggatatttgtcacaagatgggcattggaatggcggagttc
ttggaaaagaaggttgactcccaacaagagtgggacaagtattgtcactacgttgctggg
ctggttgggattggcctttcccgtctgttctctgcatctgagctggaagagcctattgta
ggccaggacacagagcttgcaaattccatgggcctctttcttcagaaaaccaacatcatc
cgggattacctggaagaccagctggagggacgagaattctggcccagagaggtctggggc
aggtatgtcaagaagctgtcggatcttgccaagcctgagaacatagacgtggctgtccag
tgcatgaatgaactgatcacaaatgccttgcaccacgtccccgatgtcctcacctactta
tctagactgaaaaaccaaagtgtcttcaacttctgcgcaatcccgcaggtgatggccatt
gctacgttggctgcctgttacaataacaagcaggtgttccggggggtggtgaagattcgg
aaaggacaagctatcactttaatgatggatgccacaaacatacaggctgtcaagaccata
atgtaccagtacgtggaagagatctctcggaaggtccccagcggtgacccgtcctctagc
aagacccagcagatcatcgtctctatccggacaacgaacttgcccaacagcgcggtggtg
acccggaaccattactcgcccttttacctctccttcgccatgtttctggcagcgctgagc
tggcggtacctgagcaccatgtcgaaggcgtcagaggagtacgtccaggccagcgagaac
tga
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