Carettochelys insculpta (pitted-shelled turtle): 142011682
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Entry
142011682 CDS
T11194
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
142011682 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ciz04121
]
142011682 (TRIM54)
Ubiquitin system [BR:
ciz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
142011682 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
DUF1664
Sina_RING
PAH_ZNF598
Spectrin_Anc-1_2
AAA_13
Zn_ribbon_FGT1_2
UvrD_C
NAP
MRP-S23
DUF349
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
142011682
NCBI-ProteinID:
XP_074847673
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Position
3:complement(210829710..210879133)
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AA seq
380 aa
AA seq
DB search
MNFAVGFKPMLGDSHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDIFQASNP
LWQSRGSSSVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHAKA
EQQLMCDEHEDEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPSVYKRQKSELSDGVAM
LVAGNDRIQAIITQMEEMCKAIEENSRRQKQHLSQRFDALYGSLEERRKELVQRISREQE
ERVSHVRSLIRQYGEHLETSSKLVESAIQAMEEPQMAVYLQQSKELLHNFPKTDGQQECA
VVMITDMSKVSMNSRPEPGFEKMDHFSINVDYLAEMLRTIEFQTDPSGENDPDGCVDGAG
GDAGAEEDRPDGLEGDEGQP
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgccgtggggttcaagcccatgctgggggactcgcacagcatggacaacctg
gagaagcagctgatctgtcccatctgcctggagatgttcagcaagcccgtggtcatcctg
ccctgccagcacaacctgtgccgcaagtgtgccaacgacatcttccaggcttccaacccg
ctgtggcagtcccggggctccagctcggtgtcctcgggggggcggttccggtgcccctcc
tgccgccatgaggtcgtcctggaccggcacggcgtctacgggctgcagcgcaacctgctg
gtggagaacatcatcgacatctacaagcaggagtcgtcccggcccctgcacgctaaggca
gagcagcagctgatgtgtgatgagcacgaagatgaaaagatcaacatctactgcctgagc
tgtgaggtgcccacctgctccctgtgcaaggtcttcggggctcacaaggactgcgaggtg
gccccgctgcccagcgtctacaagcgccagaagagcgagctgagcgacggcgtggccatg
ctggtggctgggaacgatcgcatccaggccatcatcacccagatggaggagatgtgcaag
gccatagaggagaacagccggcggcagaagcagcacctgagccagcgcttcgacgcgctc
tacggcagcctggaggagcgccggaaggagctcgtccagcgcatcagccgggagcaggag
gagcgggtgagccacgtgcgctccctcatccgccagtacggggagcacctggagacctcc
tccaagctggtggaatccgccatccaggccatggaggagccccagatggccgtttacctg
cagcaatccaaggagctgcttcacaatttccctaagactgacgggcagcaggagtgcgca
gtggtaatgatcacagacatgtccaaggtgtcgatgaacagccgcccggagcccggcttc
gagaagatggaccacttctccatcaacgtggactacctggccgagatgctgagaaccatc
gagttccagacagacccgtcaggagagaacgacccagatgggtgtgtggacggggccgga
ggagacgccggagctgaggaggacaggccagacgggctggagggggatgaaggtcagccc
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