Carettochelys insculpta (pitted-shelled turtle): 142012143
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Entry
142012143 CDS
T11194
Symbol
LEF1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04310
Wnt signaling pathway
ciz04520
Adherens junction
ciz04916
Melanogenesis
ciz05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
142012143 (LEF1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
142012143 (LEF1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
142012143 (LEF1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
142012143 (LEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142012143 (LEF1)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
142012143 (LEF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
142012143
NCBI-ProteinID:
XP_074848078
LinkDB
All DBs
Position
4:109555599..109665144
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AA seq
413 aa
AA seq
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MPQLAGAAGGGGGDPELCATDELIPFKDEGDPQKEKIFAEISHPEEEGDLADIKSSLVNE
SEIAPGGEGHEVSRQAQAQEPYHDKGREHSEEGKHPDGGLYSKGPSYSGYSGYIMMPNMN
NDPYMSNGSLSPPIPRTSNKVPVVQPSHAVHPLTPLITYSDEHFSPGSHPSHIPSDVNSK
QGMSRHPPAPDIPTFYPLSPGGVGQITPPLGWQGQPVYPISSGFRQPYPSSLSVDPSMSR
FSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHADSDLMHVKPQHEQRKEQEPKRPHIKK
PLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQ
LYPGWSARDNYGKKKKRKREKLQESTSGGKRNAFSTCKTKAATPGPLLEMEAC
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgccccagctggcgggcgccgcaggcggcggcggaggggacccggagctgtgcgccacc
gatgagctgatccccttcaaagacgagggcgacccccagaaggagaagatcttcgccgag
atcagccacccggaggaggaaggcgacttggccgacatcaagtcctcgctggtgaacgag
tcggagatcgcccccggcggcgagggccacgaggtttccaggcaagcccaagctcaggaa
ccttatcatgacaaaggcagagaacattctgaagaaggaaaacatccagatggtggctta
tacagtaaaggcccatcatactctggttattctgggtatatcatgatgccaaatatgaac
aatgacccctacatgtctaatggatctctgtctccacccatccccagaacatcaaataag
gtgccagtggtgcagccttcacatgctgttcatcctcttactccacttatcacttacagc
gacgagcacttttctccagggtcacacccttcacacatcccctcagatgtcaactcaaaa
caaggcatgtcaagacatcctccagctccagatatccctaccttctatcccttgtctcct
ggaggtgtaggacagataacaccacctcttggctggcaaggtcagcctgtatatcccatc
tcgagtggattcaggcaaccctacccatcctcactctcagtcgacccttccatgtccagg
ttttcacatcacatgattcctggacctccaggccctcacacaactggaatccctcaccca
gctattgtaacgcctcaagtcaaacaagaacatccacacgctgacagcgacttaatgcat
gtgaagcctcagcatgaacagagaaaagagcaagagccgaaaagacctcacattaaaaaa
cctctgaatgctttcatgttatacatgaaagaaatgagagcaaacgtcgtagcagagtgt
actctgaaagaaagcgcagctatcaaccagatacttggcagaaggtggcatgctctctcc
cgagaagagcaagctaaatattacgaactagctcggaaagaaaggcagctacacatgcag
ctttacccgggctggtcggcaagagataactatgggaagaaaaagaagaggaagagagaa
aaactacaagagtcaacatcaggtgggaagagaaatgcattctcaacatgcaaaacaaag
gcagcaacgccaggaccccttctggagatggaggcttgttaa
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