Carettochelys insculpta (pitted-shelled turtle): 142012431
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Entry
142012431 CDS
T11194
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
142012431 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ciz01009
]
142012431 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ciz04515
]
142012431 (PCDH7)
Protein phosphatases and associated proteins [BR:
ciz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
142012431 (PCDH7)
Cell adhesion molecules [BR:
ciz04515
]
Cadherins
Protocadherins
142012431 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
LYRIC
KIAA1549
TMEM154
Motif
Other DBs
NCBI-GeneID:
142012431
NCBI-ProteinID:
XP_074848676
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All DBs
Position
4:37899021..38315078
Genome browser
AA seq
1271 aa
AA seq
DB search
MGKMRTLLGVMHCCCCLLLLPAPLWVSLAAAKQLLRYRLAEEGPADIRIGNVASDLGIVT
GSGEVTFSLESGSDYLKIDNMTGELSTTERRIDREKLPQCQMIFDENECFLDFEVSVIGP
SQSWVDLFEGRVIILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIER
YELLQEPGGDGGRRGGGGSAAGSESALYPGGSKRRQEADGAARSSVFELQVADTPDGEKQ
PQLIVKGALDREQRDSYELSLRVRDGGDPARSSQAILRVLITDVNDNSPRFEKSVYEADL
AENSSPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDREE
VNQLRFTVMARDRGQPPKTDKATVVLNIRDENDNVPTIDIRKIGRIPLRDGVASVAEDVL
VDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASEGEGEPQNKRKYFLHTSAPLDYE
AVRDYNVVIVAVDSGSPSLSSNNSLLVRVADTNDNPPVFGQALLEVSFPENNAPGERVAT
VAATDADSGKNAELSYSLEPSPLSAEAPGGVFSIDPDSGDVLVQAVLDREQRDTYEFQVT
ARDKGVPALQGSTTVVVRVADRNDNEPRFMQDVFTFYVKENLQPNSPVGMVTVMDADRGR
NAELSLSIQPGEQGQAAGIFSIENDTGTIYSTVSFDRELQTSYTFRVKAVDGGEPPRSAT
ATVSLFVMDENDNPPAVTFPSNSSYTVLPPSSNLRTVVATVLATDADTGLNADLNYSIVG
GNPFKLFEIDPASGVVSLVGKLAPKHHGLHRLVVQVNDSGQPPQSTTALLHVFVNESLSN
ATVVESQVARSLHTPLAQDIAGDPSYELSKQRLSIVIGVVAGIMTVVLLILVVVMARYCR
SKGKHGYEAGKKDHEDFFTPQQHDKAKKPKKDKKGKKGKQPLYSSIVTVEASKPNGQRYD
SVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQELP
PANTFVGAGDNISIGSDHCSEYSCQASSKYSKQPFRRVTFSVVSQPQDPHQGSLQSCYDS
GLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENGGSVPLSDFYGYATA
CLLNMNSRPLPDVALTGKCTRECDEYGHSDSCWMPVRTSPERKQKSQPKLSTFMPVDERG
SQEKLANGEASLMGDRNRNLLNKKLTSSYETFSAASFSKNEEANPEDIPLTQTGEYKPSP
VNTLTRREVYL
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggggaagatgcggactctccttggcgttatgcattgctgctgctgcttgctcctcctg
cctgctccgctctgggtcagcctggccgcggccaagcagctgctgaggtaccgcctggcc
gaggaaggacccgccgacatccgcatcggcaacgtggcttcggacctgggcatcgtgacg
ggctccggggaggtgacattcagcctggagtcgggctccgactacctgaagatcgataac
atgaccggggagctgagcaccacggagcggcgcatcgaccgcgagaagctgccgcagtgc
cagatgatcttcgacgagaacgagtgcttcctggacttcgaggtctcggtcatcggcccc
tcgcagagctgggtggacctcttcgagggccgggtcatcatcctcgacatcaacgacaac
acccccaccttcccctcgcccgtcctcaccctcaccgtggaggagaaccggcccgtgggg
accctctacctgctccccaccgccaccgacagggacttcggccgcaacggcatcgagcgc
tacgagctgctgcaggagcccggcggggacgggggcagacgcggcggcggggggtcggcg
gcgggctccgagagcgccctctacccgggcggcagtaagaggcggcaggaggcggacggg
gctgcccgcagcagcgtgttcgagctgcaggtggccgacacgccggacggggagaagcag
ccgcagctgattgtcaagggggcgctggaccgagaacagagggactcctacgagctgagc
ctgagggtgcgggacggcggcgacccggcccgctcctcccaggccatcctgcgggtgctg
atcaccgacgtgaacgacaacagcccccgcttcgagaagagcgtctacgaggcggacctg
gcggagaacagcagccccgggacccccatcctgcagctgcgggcggccgacctggacgtg
ggggtgaacgggcagatcgagtatgtcttcggggccgccaccgagtcggtgcggcgcctg
ctgcggctggacgagacctcgggctggctcagcgtcctgcaccgcatcgaccgcgaggag
gtgaaccagctgcgcttcaccgtcatggcccgggaccgcggccagccgcccaagaccgac
aaggccacggtggtgctcaacatccgcgacgagaacgacaacgtgcccaccatcgacatc
cgcaagatcggccgcatcccgctgcgggacggggtggccagcgtggccgaggacgtgctg
gtggacacccccatcgcgctggtgcaggtgtcggaccgcgaccagggcgagaacggcgtg
gtgacctgcacggtggtgggggacgtgcccttccagctcaagccggccagcgagggcgag
ggcgagccgcagaacaagcgcaagtacttcctgcacacctccgccccgctggactacgag
gccgtccgggactacaacgtggtgatcgtggcggtggactccggcagccccagcctgtcc
agcaacaactcgctcctggtgcgggtggccgacacgaacgacaacccgccggtgttcggc
caggccctgctggaggtctccttcccggagaacaacgcgcccggcgagcgggtggccacg
gtggcggccacggacgcggacagcggcaagaacgcggagctgagctactcgctggagccc
tcgcccctctccgccgaggcgcccggcggcgtcttcagcatcgacccggactccggggac
gtgctggtgcaggcggtgctggaccgcgagcagcgcgacacctacgagttccaggtgacg
gcccgggacaagggggtgccggccctgcagggctccaccacggtggtggtgcgggtggcc
gaccgcaacgacaacgagccgcgcttcatgcaggacgtgttcaccttctacgtgaaggag
aacctgcagcccaacagccccgtgggcatggtgaccgtcatggacgccgaccggggccgc
aacgccgagctcagcctctccatccagcccggcgagcagggccaggccgccggcatcttc
tccatcgagaacgacaccggcaccatctactccaccgtctccttcgaccgcgagctgcag
accagctacaccttccgggtcaaggcggtggacggcggggagccgccccgctcggccacc
gccaccgtctcgctcttcgtgatggacgagaacgacaacccgccggccgtcaccttcccc
agcaacagctcctacaccgtgctgcccccctccagcaacctgcgcaccgtggtagccacc
gtgctggccaccgacgcggacacgggcctcaacgccgacctcaactacagcatcgtgggc
ggcaaccccttcaagctcttcgagatcgacccggccagcggcgtggtgtcgctggtgggc
aagctggcccccaagcaccacggcctgcaccgcctcgtggtgcaggtgaacgacagcggc
cagccgccccagtccaccaccgccttgctccacgtcttcgtcaacgagagcctctccaac
gccaccgtggtggagagccaggtggcccgcagcctgcacacgcccctggcccaggacatc
gccggcgaccccagctacgagctgagcaagcagcggctcagcatcgtcatcggcgtggtg
gccggcatcatgaccgtggtgctgctcatcctggtggtggtcatggcccgctactgccgc
tccaagggcaagcacggctacgaggcgggcaagaaagaccacgaggacttcttcaccccg
cagcagcacgacaaggccaagaagcccaagaaggacaagaagggcaagaaggggaagcag
cccctctacagcagcatcgtcaccgtggaggcctccaagcccaacgggcagcgctacgac
agcgtcaacgagaagctctccgacagccccagcatgggccggtaccgctcggtcaacggc
ggcccgggcagcccggacctggcccggcactacaaatccagctcgccgctgcccacggtc
cagcttcacccgcagtcccccaccgccgggaaaaagcaccaggccgtgcaggaactgccc
ccggccaatacttttgtgggggccggagacaacatctccattggatctgaccactgctcc
gagtacagctgtcaggccagcagcaagtacagcaagcagccatttcgtagagtgacgttt
tctgttgtgagtcagcctcaggacccacatcaagggtcattgcagagttgctatgacagc
ggtctggaggagtcagaaacaccaagcagtaagagttcatcagggccaagactgggtgcc
cttccactcccagaggacaactacgaaaggactacgccggatggcagtgttggtgaggca
gagcatatggaaaatggtggcagtgtccctttgagtgatttttatggatatgctacagcc
tgtctcctgaacatgaattcgaggcctctaccagatgtagccctgacagggaaatgtact
cgagaatgtgatgaatatggccactcggactcctgctggatgccagttcgcacttcacca
gaaaggaagcagaagagccagccaaaactgtccaccttcatgcccgttgatgaacgaggc
agtcaggaaaagctggccaatggagaagcctccctcatgggtgatcgcaacagaaatctc
ctcaacaaaaagttgacctcatcctatgagaccttcagtgcagctagtttcagcaaaaat
gaggaagcgaacccagaagatatcccccttacacagacaggggaatacaaaccgtctcct
gtcaatactctaactagaagagaagtttacctgtag
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