Carettochelys insculpta (pitted-shelled turtle): 142012493
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Entry
142012493 CDS
T11194
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142012493 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142012493 (FIP1L1)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
142012493 (FIP1L1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
142012493
NCBI-ProteinID:
XP_074848872
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Position
4:49772420..49831564
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AA seq
608 aa
AA seq
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MAAGEVERLAADLSGAGGDEEEEWLYGDENEPERPEEQKASAPPPVNEEEAAENGVVKTK
VTEAEDDSESDSDDDEDDVHVTIGDIKTGAPQYGYGTAPVNLNIKTGGRVYGSSGAKVKG
VDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRMG
LEILPVTSTTNKIMAEDSSMEVTPGAEIQDGRYNLFKVQQGRTGNMEKEVAVQPTKAEFT
SPPPLFKSGIPTNRNSASSQSQTSTASRKASSGIRKWQERYGRAESPELRRLSGTIDVIG
QTITISRVEGRRRANENSNIQVLSERSSADVDSFTKPPPFFPPGAPPTHLPPPPFLPPPP
TVSTAPPLIPPPGKYELREKYNLHRSSGKSFQIWTPKCIPITVPPPGFPPPPGGPPPSLI
PTIESGHSSGYDSRSARAFPFTFPHLAGSAPSWPSLVETSKQWDYYPRREKDRERERERD
RERDRDRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYTERSYERHRTSREKEE
RHRERRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASGEPAPEQE
NTEAAPVE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcgaggtggagcggctggcggcggacctgagcggggccggcggggatgag
gaggaggagtggctctatggcgatgaaaatgaaccagagagaccagaggaacaaaaagct
agtgctccacctcctgtgaatgaagaggaagctgctgaaaatggtgtagtgaaaacgaag
gtgacagaggctgaggatgacagtgagagtgacagcgatgatgatgaggatgatgttcat
gtcactataggagatattaaaacaggcgctccacagtatggttatggaacggctcccgtg
aatctcaacatcaagacaggaggtcgagtttatggatcttctggtgcaaaagtcaaaggg
gtcgatcttgatgcaccaggaagtattaatggtgttccgcttctggaagtagatttagat
tctttcgaggataaaccctggcgaaaaccaggtgctgatctttcagattatttcaattat
gggtttaatgaagatacctggaaagcttactgtgaaaaacaaaagaggatacgaatggga
cttgaaattttaccagttacttcaactaccaataaaattatggccgaagacagttctatg
gaagtaacaccaggtgcagagattcaagatggcagatacaatctttttaaggtacagcag
ggcagaactggaaatatggagaaggaggtggctgtgcaaccgacaaaagctgagtttaca
tctcctcctcctttgttcaaatcaggaatcccaacaaacagaaacagcgcctcttctcag
tcacagacaagcactgcttccagaaaagccagttcaggcatcaggaagtggcaggagcga
tatgggagggccgaatcacctgaactaaggagattgtctggtacaatagatgtgattgga
cagaccatcactatcagcagagttgaaggaaggcggcgtgccaatgaaaatagcaacata
caggttctttcagaaagatccagtgctgatgtagacagttttaccaagccacctccattt
ttccctccaggagctcctcccacccatctgccaccaccacctttcctgccaccccctcca
actgtcagtactgctcctcctctcattcccccaccaggtaaatacgaactgagagagaaa
tacaatctgcacagatcctcaggcaaaagttttcaaatttggacgcctaaatgtatacca
ataacagtgccaccaccaggatttcctcccccacctggaggtccaccaccctctcttata
ccaacaatagaaagtggtcattcctctggctatgacagccgctctgctcgtgcatttccg
ttcacatttccgcaccttgcaggttctgctccttcgtggcctagtctcgtggagaccagc
aaacagtgggattattatccacgaagagagaaagacagagaacgagaacgagagagagac
cgagagagggatcgtgatagggatcgtgatagggaacgtgaacgaaccagagagagagag
agggagcgtgatcacagcccaactccaagtgttttcaacagtgatgaagaacgatatagg
tatagagaatacacagaaaggagctatgagcgtcacagaacaagcagagagaaagaggaa
cgacacagagaaaggaggcatagagaaaaagaagagactagacacaaatcatctcgaagt
aacagcaggcgtcgccatgacagtgaagagggggacagccacaggaggcacaaacacaaa
aagtccaaaagaagcaaagaaggaaaagaagctagtggtgaacctgccccagaacaggaa
aatacggaagctgctcctgtggaatag
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