Carettochelys insculpta (pitted-shelled turtle): 142012496
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Entry
142012496 CDS
T11194
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04010
MAPK signaling pathway
ciz04020
Calcium signaling pathway
ciz04144
Endocytosis
ciz04510
Focal adhesion
ciz04540
Gap junction
ciz04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
142012496 (PDGFRA)
04020 Calcium signaling pathway
142012496 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
142012496 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
142012496 (PDGFRA)
04540 Gap junction
142012496 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
142012496 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ciz01001
]
142012496 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ciz04090
]
142012496 (PDGFRA)
Enzymes [BR:
ciz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
142012496 (PDGFRA)
Protein kinases [BR:
ciz01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
142012496 (PDGFRA)
CD molecules [BR:
ciz04090
]
Proteins
142012496 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
C1-set
Motif
Other DBs
NCBI-GeneID:
142012496
NCBI-ProteinID:
XP_074848889
LinkDB
All DBs
Position
4:50281716..50328160
Genome browser
AA seq
1087 aa
AA seq
DB search
MGTSPRTFLLLGCLLAGPRLTFCQLPLPTVLPNREEMVVQLNASFTLKCSGDSEVTWQYP
VAEGSHTIDIRNEENNSGLFVTLLEVANASAAHTGLYTCYYNYTQEEDGEVEGKDIYIYV
PDPDMPFVPLLPEDQFILVEDGDSTIIPCRTSDPNAQVALINSESKVIHAYYDSKQGFLG
NFPGGSYTCKTTVKGVEFMSDQFFIYILKATSQLPVEIEALKTVYKTGETIVVTCVVFDN
EVVNLQWNYPGKVKEKGVIKVDDIKVPSQKLVYTLTIPEASVKDTGDYECTAQHATKEVH
ENKRVVITVHDKGFIHLDPQFSPLEAVNLHEVKNFVVDVQAYPAPKMIWLKDNMILTDNL
TEIVTSSNKLHETRFQSILKLIRAKEEDSGNYTLIAENGEETKSYTFSLLIQVPALILDL
VDDHHSSGKRQTVQCLAKGTPFPDVEWLICKDIKRCNNDTSWILLTNNISDIHMEAHHLD
KDQVESQVTFQKVEETLAVRCMARNTLGAVTRELKLVAPTLRAELTVGAAVLVLLVIVII
SLIVLVILWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRILG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKAGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGMNPADESTRSY
VILSFENNGEYMDMKQADTTQYVPMLERKQGSKYSDIQRSMYDRPASYKKKSVSEPEIKN
LLSDDNSDSLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSSFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIVENLLPGEYKK
SYERIHLDFLKSDHPAVTRMRVDCDNAYIGVTYKNEDKLKARESGFDEQRLSADSGYIIP
LPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSD
LVEDSFL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttccccaaggacattcctgctcctgggatgtctcctggcaggaccccggctc
actttttgccagcttccactgccgactgttcttcccaacagagaggaaatggtcgtgcaa
ctgaacgcctcgtttaccttgaaatgctctggagacagtgaagtgacctggcaataccca
gtggctgaaggaagccatacaatagacattagaaatgaagagaacaacagtggtctcttt
gtaactttgctggaagtcgcaaatgcctcagctgcgcatactggactatacacttgttac
tacaattatactcaagaagaggacggggaggtggaagggaaggatatctacatctatgtg
cctgatccagatatgcccttcgttcctctgctaccggaggatcagtttatcctagtagaa
gatggtgattcaaccattatcccttgtcgtacaagtgaccctaatgctcaagtagcttta
attaacagtgaatccaaggtcatacatgcctattatgacagcaaacaaggcttcctagga
aattttcctggaggctcatatacatgcaaaacaactgttaaaggagtggagttcatgtca
gatcagtttttcatctacattttgaaagctacttcacagctgccagttgagattgaggcc
cttaaaactgtgtataaaacaggcgaaacaattgtggtgacttgtgtggtctttgacaac
gaggtggttaatttacagtggaattatccagggaaagtgaaagaaaaaggtgtgataaaa
gttgatgatattaaagttccatctcagaagctggtttacactttgaccattcctgaggct
tcagtgaaggataccggggattatgaatgcactgcccaacatgcaaccaaggaggttcat
gaaaataagagagtagtcattacagttcatgataaaggattcattcatctggacccccag
tttagccctctggaagctgtcaatttacatgaggtgaaaaattttgtagtggatgtgcag
gcttacccagctccaaaaatgatctggctgaaggacaacatgattctgactgataacctt
acagagattgttactagttcaaacaagctccatgagacaagattccaaagtatattaaaa
ctgattcgggccaaggaagaagacagtggaaattatactttgattgctgaaaatggagaa
gagactaaaagctatactttctcattactaatacaagttccagctttaattctagacttg
gtggatgatcaccacagctctggaaagagacagacagtccaatgcttggcaaaagggaca
cctttccctgacgtggaatggctgatttgcaaggacattaaaagatgcaataacgatact
tcatggattcttctgactaacaacatctcagatatacacatggaggctcatcaccttgat
aaggaccaggtggaaagccaggtgaccttccaaaaggtagaagagacactggcagtacgg
tgcatggcgaggaacactcttggtgctgttactcgggaactgaagcttgtggctcctaca
ttgcgagcagaactaacggtgggtgctgcagtcctagtgctattagtgattgtgattatt
tcactgatagtcctggtcatcctatggaaacagaaaccaaggtatgagataagatggaga
gtcattgaatctatcagccctgatggccatgaatacatttatgtggacccaatgcaactg
ccctatgactcaagatgggagtttcccagagatggattagtacttgggcgaatcctgggt
tcaggcgcatttgggaaagtagttgaaggaactgcatatggattaagtcgctctcaacca
gtgatgaaggtagccgtgaaaatgctgaaacccacagctagatccagtgaaaaacaagcg
ctaatgtctgaactgaagataatgacacatcttgggccccatttgaacattgtgaacctc
ttaggagcttgtaccaaagcaggtccaatttacatcattactgaatactgcttttatggg
gatttggtaaactacctgcataaaaacagggataatttccttagccgacatccagaaaag
ccaaagaaggacttggacatttttgggatgaacccagctgatgagagcacaagaagttat
gtcattttatcctttgaaaacaatggggaatacatggacatgaaacaagctgatacaact
cagtatgtgccaatgctggaaaggaagcagggttctaagtattcagatatccagagatcc
atgtatgatcggcctgcatcatataagaagaaatctgtgtcagagccagaaatcaaaaac
ttgctttctgatgacaattctgacagcctcagtctgctcgatttgctgagcttcacatac
caggttgcacggggaatggagtttttagcttctaaaaattgtgtgcaccgtgacttggca
gctcgtaatgtccttctggctcaaggaaaaattgtgaagatctgtgactttggtctggct
agggacatcatgcatgattccaactatgtctccaaaggcagtacttttctaccagtgaaa
tggatggcacctgaaagcatttttgataatctgtacaccacattaagtgatgtctggtct
tatggcattctgctgtgggagatattttctcttggtggcaccccataccctggcatgatg
gttgattcttctttctataacaagataaaaagtggataccgaatggcaaaacctgaccat
gctaccagcgaagtctatgagatcatggtgaaatgttggaacagtgagccggagaaaaga
ccttctttttaccatttgagtgaaatcgttgagaatctgttgcccggagagtacaagaag
agctatgaaaggatccacctggacttcctgaaaagtgaccacccggctgtcacgcgcatg
cgagtggactgtgacaacgcgtacatcggtgtcacctacaagaatgaagacaagctaaag
gccagggagagtgggtttgatgagcagaggttgagtgctgacagtggctacatcatcccc
ctgcctgacatcgatcctgtctccgaagatgaacttggcaagaggaacaggcacagctcc
cagacgtctgaagaaagtgccattgagactggttctagcagctctacctttatcaagcga
gaggatgagaccattgaagacattgacatgatggacgacattgggatagattcctcagac
ctggttgaagacagcttcctgtaa
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