Carettochelys insculpta (pitted-shelled turtle): 142012640
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Entry
142012640 CDS
T11194
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142012640 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ciz03021
]
142012640 (SMARCA5)
03036 Chromosome and associated proteins [BR:
ciz03036
]
142012640 (SMARCA5)
Transcription machinery [BR:
ciz03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
142012640 (SMARCA5)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
142012640 (SMARCA5)
RSF complex
142012640 (SMARCA5)
WICH complex
142012640 (SMARCA5)
B-WICH complex
142012640 (SMARCA5)
NORC complex
142012640 (SMARCA5)
BRF complex
142012640 (SMARCA5)
NuRF complex (fruit fly)
142012640 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
142012640
NCBI-ProteinID:
XP_074849364
LinkDB
All DBs
Position
4:complement(87834473..87881952)
Genome browser
AA seq
1040 aa
AA seq
DB search
MSAGQQEPPPDESLSSASTAPPAATANNGGEVAGAPSLAGGNPDMEEGFNDASPGKQKEI
QEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQ
NLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLIS
LYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVP
TLRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRI
KNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNN
CLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID
ILNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLP
KLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSKF
VFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTV
EERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDED
IDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKMAFTEWIEP
PKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYR
KTIGYKVPRNPDLPNAAQAQKEEQLKIDEADPLNDEELEEKEKLLTQGFTNWNKRDFNQF
IKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQR
RISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDEL
RQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSSA
QKRKMDGTPDGRGRKKKLKL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgggcagcaggagccaccgccggatgagagcctctcctctgctagcactgcg
ccccccgccgcaaccgccaacaacggcggcgaagtcgcgggggccccgtctctcgcggga
ggaaaccccgatatggaggaaggatttaatgatgcatcaccaggaaaacaaaaagaaatc
caggaaccagatcctacatatgaagagaaaatgcaaacagatagggcaaacagatttgag
tatctgttaaagcagactgagctgtttgctcatttcatccagcctgctgctcaaaagact
ccaacttcacctttgaaaatgaaaccaggacgtccacgaataaaaaaggatgagaaacag
aatctgttgtcagttggcgactatcgacatcgtagaacagaacaggaagaagatgaggag
ctattgacagaaagctccaaagcaactaatgtatgcactcgatttgaagattctccatca
tatgtaaaatggggtaaactgcgtgattatcaggtccgagggttgaactggctcatttct
ttgtatgagaatggcatcaatggaatccttgcagatgaaatgggtcttggaaagacattg
caaacaatttctcttcttgggtacatgaaacactacagaaatattcctggccctcacatg
gtattagttcccaagtccactttacacaactggatgagtgagttcaagagatgggtgcca
acacttcgagcagtttgtttgataggtgacaaagaccaaagagccgcctttgtccgagat
gtactgctgccaggagaatgggatgtctgtgtgacctcctatgaaatgcttattaaagag
aaatctgtgttcaaaaaatttaactggagatatctagttatagatgaagcccacaggatc
aaaaacgaaaaatcgaagttgtcagaaattgtgagagaattcaagacgacaaatcggctg
ctgttaactggaactccacttcagaataatttgcatgaactctgggcacttctcaacttt
cttttgccagatgtctttaactcagctgatgattttgattcatggtttgatacgaataac
tgtcttggggatcaaaagctggtggaacgtcttcacatggtgctaagaccattcctccta
cggcgtattaaagctgatgtggagaagagcttgcctccaaagaaagaagttaaaatttat
gtgggcctaagcaaaatgcaaagagaatggtatacacgaatcttaatgaaggatatagat
atattgaactctgcagggaaattggacaaaatgagactgttgaacatcttgatgcaattg
cgaaaatgttgcaatcatccttacctcttcgatggagcagagcctggtccaccttacaca
acagatatgcatttggttacaaacagtggcaaaatggtggtattggacaaattgctacca
aagttgaaggaacaaggctcacgagtactaatctttagtcagatgaccagagtgttagac
atcttagaagattactgcatgtggcgaaattatgagtattgtagattggatggtcaaaca
cctcatgatgagagacaagcttctattaatgcatataatgaacctggcagctccaagttt
gtgtttatgttgagcacacgggctggtggtcttggaatcaatctggctactgctgatgtt
gtaattctttatgattcagactggaatccacaagtagatcttcaagctatggatcgagca
cacagaattggccagacaaagactgttagagtgttcagatttatcacagacaacactgtg
gaggaaagaatagtggaaagagcagaaatgaaacttcgtttggattccatagtcattcaa
caagggagacttgtggatcaaaatctgaataaaatagggaaagatgaaatgctgcagatg
attcgacatggagctacacatgtgtttgcatcaaaggagagtgagattactgatgaagat
attgatggtattttggaaagaggtgcaaagaagactgcagaaatgaatgagaaactctcc
aagatgggtgaaagttcactcagaaattttacaatggatacggagtccagcgtatacaac
tttgaaggggaagattacagagagaaacaaaagatggcattcacagagtggattgagcct
cctaaacgagaaagaaaagctaactatgctgttgatgcctacttcagggaagctcttcgt
gtcagtgaaccaaaagcaccaaaagctccacgacctccaaaacagcctaatgttcaagat
ttccagttctttcctccacgtttgtttgaactactagaaaaagagattctgtattacaga
aaaactattgggtacaaggtacctcgtaatccagacttgccaaatgcagcccaagcacaa
aaggaagaacagcttaaaattgatgaagctgatccccttaatgatgaagaattggaagaa
aaggagaaactactaacacagggatttaccaactggaataaaagagattttaaccagttc
atcaaggctaacgaaaaatggggacgtgatgatattgaaaatatagctcgcgaagtcgaa
ggaaaaaccccagaggaagtcattgagtattcagctgtgttctgggaaagatgtaatgaa
ttgcaagacatagagaagatcatggctcagattgaaagaggagaagctagaattcagagg
cggattagtataaaaaaagcacttgacacaaagattggcagatacaaagcaccttttcac
cagttgagaatatcatatggaactaacaaagggaagaattatacagaagaggaggatcgc
tttctcatctgtatgcttcataagctagggtttgataaagaaaatgtatatgacgaatta
aggcagtgtattcgaaactctccccagttcagatttgactggttccttaagtctagaact
gcaatggagctacagaggagatgcaataccttaatcactttgattgaaagagaaaacatg
gaattggaagaaaaggagaaggcagagaagaaaaaacgtggaccaaagccttcttcagca
cagaagcgtaaaatggatggtacccctgatggtcgaggaagaaaaaagaagttaaagctg
tga
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integrated database retrieval system
