Carettochelys insculpta (pitted-shelled turtle): 142012801
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Entry
142012801 CDS
T11194
Symbol
PKD2
Name
(RefSeq) polycystin-2
KO
K04986
polycystin 2
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ciz03037
]
142012801 (PKD2)
04040 Ion channels [BR:
ciz04040
]
142012801 (PKD2)
Cilium and associated proteins [BR:
ciz03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
142012801 (PKD2)
Ion channels [BR:
ciz04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
142012801 (PKD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
SU10_portal
Motif
Other DBs
NCBI-GeneID:
142012801
NCBI-ProteinID:
XP_074849742
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All DBs
Position
4:complement(121624726..121680170)
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AA seq
912 aa
AA seq
DB search
MAGVGGARAALCSAGGGRGQPGLELARLREPAGGPCSRQAWSRDNPGFEPEEAAAAGPQM
EPDVEWGRRAAASSPGSSSARGPAEEPDSGRRRRRRGERGGAAAPYPTTPGTDPLAPHPP
PDGAPPPHRAAWAKRLARRLRGLWGTRLMEENTSRERYLKSVLRELITYIVFLVVLCVLT
YGMVSSSMYYYTRVMSQLFLETPVSKMEKTNFKTLSTMEDFWKFTEGPLLDGLYWEMWYN
NKTMAENKSLIYYENLLLGVPRVRQLKVKNGSCSIPEDLKDEIKECYDVYSVANEDTAPF
GLRNGTAWIYTNEPDLNGSSHWGLIASYSGAGYYQDLSRSREETAAQIANLKKNLWLDRG
TRATFIDFSVYNANINLFCIVRLLVEFPATGGLITSWQFQPVKFIQYISTFDFFMAACEM
AFCLFILYYVIEEILEIRIHQLHYFRSLWNCLDILIIVLSIAAIGINIYRRSTVDILLKK
QLENQNAFPNFESLAYWQIQFNNIAAVTVFFVWIKLFKFVSFNRTMSQLSTTMSRCAKDV
IGFAIMFFIIFLAYAQLAYLVFGTQVDDFSTFQECVFTQFRIILGDFSFSEVEEANRVFG
PIYFTTFVFFMFFILLNMFLAIINDTYSEVKSDMAQQKVEMELSDLIKKGYNKAMIKLKL
KKATVDDISDNLRQVGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQ
MRDDLEKEREDLDLDRSSLSRPMSGRSFPRSLDDSEEDDDEDSGHSSRRRGSSSSGVSYE
EFQVLVRRVDRMEHSIGSIVSKIDAVIIKLEAMERAKLKRRDMLGRLLDGVTEDERLGCD
NEIHREQMERLVREELERWESDDTASRMSHRLGTPLGLNSQSRSRNSRPSSSQSTEGIDG
NGGGNGVNNIHV
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggtcgggggcgccagggccgcgctctgctcggcgggcggcggccgcgggcag
ccagggctggagctggcgcggctgcgggagcccgcgggcgggccttgctcgcggcaggcc
tggagccgggacaacccgggcttcgagccggaggaggcggctgcggcggggccgcagatg
gagccggacgtggaatggggcaggcgagctgccgcctcctcccccgggagcagcagcgcc
cgcggcccggccgaggagcccgacagcggccggcggcggcgccggcggggggaacggggc
ggggcggcggccccctaccccaccacgcctggcaccgacccgctggccccacacccgccc
ccggacggggccccgccgccccaccgagccgcctgggccaagcggctggcgcgccgcctg
cgaggtctctggggtacaagactgatggaagaaaacacaagcagagagagatacctgaaa
agtgttttacgagaactgatcacatacatcgttttccttgtggtcttgtgtgtcttgacg
tatgggatggtgagttccagtatgtactattacactagggtaatgtcacagttgttcctg
gaaacacctgtatcgaaaatggagaaaaccaatttcaaaaccttgtccaccatggaggac
ttctggaagttcacagaaggtcctttgctggatggtctgtactgggagatgtggtacaac
aataaaaccatggcagaaaacaaaagtttgatttattatgagaacctgcttttgggggtg
cctcgtgttcggcagctgaaagtgaaaaatgggtcatgctcaatacctgaggatttaaaa
gatgaaattaaagagtgctatgatgtttattctgttgctaatgaagatacagctcctttt
gggctccgaaatggaacagcttggatctacaccaatgaaccagatttgaatgggagcagc
cattgggggttgattgcctcatacagtggggcaggttattatcaggatctgtcaagaagc
agagaggagacagctgcacagattgctaaccttaagaaaaacttgtggctggatagaggg
acaagggccacgtttattgatttctctgtgtacaatgcgaacatcaatctattctgtatt
gtcaggttattggtggagtttccagcaactggaggtctcattacgtcttggcagtttcag
ccagtgaagtttatccaatacatttctacttttgatttcttcatggcagcatgtgaaatg
gccttttgtctcttcatcctttattatgtaatagaagagatcttggaaattcgtattcat
caactgcattacttcaggagtctctggaattgtcttgatatcctcatcattgtgctgtca
atagcagctataggaattaatatatatagaaggtcaacagtggacatattactgaagaag
cagctggaaaatcaaaatgctttccccaattttgaatctttggcatattggcaaatacag
tttaacaatattgctgctgtcactgtgttttttgtctggattaagcttttcaaatttgtc
agcttcaacagaacaatgagtcagttatccaccaccatgtctcgctgtgccaaagatgtt
attggttttgctattatgtttttcattattttcttagcatatgctcagctggcttacctg
gtgtttggcactcaagttgatgacttcagcactttccaagagtgtgtctttactcagttc
cgcatcattttgggagactttagcttttcagaggttgaagaagctaacagagtttttgga
ccaatttatttcactacatttgtgttctttatgttcttcattcttttgaacatgtttttg
gccattatcaatgatacttattcagaggtgaaatcagatatggcccagcagaaggtggaa
atggaactgtctgatcttatcaaaaagggatacaataaggccatgatcaaacttaaattg
aaaaaagctactgttgatgacatttcagacaacttgcgacaagttgggggcaagttaaac
tttgatgaactacgacaagatcttaaggggaagggtcacacagatgcagagattgaagca
atatttactaaatatgaccaagatggggatcaggaattgacagaacatgaacatcagcaa
atgagagatgatctagagaaagagagggaagatctggatctggacaggagctctttatca
cgtccaatgagtggacgaagcttccctcgcagtctggatgactctgaagaggatgacgat
gaggacagtggacacagctccagaagaagaggcagcagctctagtggggtttcatatgaa
gagttccaagtgctggtgagacgagtggatcgcatggaacattccataggcagtattgtt
tccaaaattgatgctgttattataaagcttgaagcaatggaacgggcaaaattaaaaaga
agagatatgttgggaagactgctagatggagttacagaggatgaaagattgggatgtgac
aatgaaatccacagggaacaaatggagcggttagtgcgagaggaactggagcgttgggag
tcagatgacacagcttcccgaatgagccaccgcttgggaacaccacttggactgaatagc
caatctcgttctaggaattcccgtccatcttcttctcagtcaacagaaggcattgatgga
aatggaggaggaaatggtgtgaataatatccatgtgtaa
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