Carettochelys insculpta (pitted-shelled turtle): 142012846
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Entry
142012846 CDS
T11194
Symbol
NUP54
Name
(RefSeq) nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142012846 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142012846 (NUP54)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142012846 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
142012846
NCBI-ProteinID:
XP_074849879
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All DBs
Position
4:128141359..128161848
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AA seq
501 aa
AA seq
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MAFNFGATTGAAAANPTGAFGGFGTTTTAPGSAFSFSAPTNTGTTGLFGATQNKGFGFGT
GFGPAAGTGTGLGTGLGTGLGFGGFSTQQQQPTLGGLFGQPTQTPTQSNQLINTASALSA
PTLLGDERDAILAKWNQLQAFWGTGKGYFNSNIAPVEFTQENPFCRFKAVGYSCMPNNKD
EDGLVVLVFNRKEADIRNQQQQLVESLHKILGGNQTLTVNVEGVKTMPDDQTEVVIYVVE
RSPNGTSRRVPATALYAHFEQVNIKTSLQQLGVTLSMARTELSPAQIKQLLQNPPAGVDP
IIWEQAKVDNPDPEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQT
TTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQ
FKGRLNELMSQIRMQNHFGAVRAEERYYIDADLLQEIKQHLKQQQEGLSHLISIIKDDLE
DIKLIEHGLNESIPIRGGNFS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaactttggggcaaccaccggcgccgccgccgctaacccgaccggtgccttt
ggaggatttgggacaactaccactgctcctgggtcagcatttagcttctctgctcctacc
aacacaggcaccactggactctttggtgctacccaaaacaaaggttttggatttggtact
ggatttggcccagcagcaggaactggtactgggctaggtactggtttaggaactggttta
ggctttggaggtttcagcacccaacagcagcagcccacattaggtggcttgtttggtcag
cccactcagacacccacccagtccaaccagctgataaacacagccagtgctctttctgct
cctacactcttgggagatgagcgggatgctattttggcaaagtggaaccagctgcaagcc
ttctgggggacaggcaaaggctattttaacagcaacattgctccagtggaattcacacag
gaaaacccattttgcagatttaaggctgtgggctacagttgtatgcccaacaacaaggat
gaagatggactggtggtcttagtcttcaatagaaaagaagcagatattcgaaaccagcag
cagcagctagtggaatcactacacaaaattttgggaggaaaccaaacacttacagtcaat
gtagaaggtgttaaaacaatgccagatgaccagactgaagttgtcatttatgttgttgag
cggtcgccaaatgggacttcaaggagagttccagcaacagccctgtatgctcattttgaa
caagtcaacataaaaacatcactgcagcagcttggcgttaccctttccatggccagaaca
gaactttctccagcacaaatcaaacagcttctgcagaaccctcctgctggtgttgatcct
attatctgggaacaggccaaagtagataatcctgatcctgaaaagcttattcctgtgccc
atggtaggtttcaaagagctgttgagacggttaaaggtccaagatcagatgactaagcag
catcagaccagattagacataatatccgaagatattagtgagctgcagaaaaatcagacg
acaactatggcaaaaatagcacagtacaagaggaaactgatggatctgtctcacagaacc
ttacaggtgttaattaaacaagagatccagaggaaaagtggctatgccattcaggctgat
gaagagcagctccgggtacaattagatacaattcaatgtgaactcaatgcaccaactcag
ttcaagggtcgactaaatgagctgatgtctcagatcaggatgcaaaatcattttggagca
gttcgggctgaagagaggtactatattgatgcagatctcttacaagaaatcaagcagcat
ttgaagcagcaacaggaaggcctgagtcatttgattagcataataaaagatgacctggaa
gatataaaattaatagaacatggattgaatgagagcatccccatcagaggaggaaacttc
agttga
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