Carettochelys insculpta (pitted-shelled turtle): 142012922
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Entry
142012922 CDS
T11194
Symbol
DCHS2
Name
(RefSeq) protocadherin-23
KO
K16507
protocadherin-16/23
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ciz04515
]
142012922 (DCHS2)
Cell adhesion molecules [BR:
ciz04515
]
Cadherins
Cadherin related
142012922 (DCHS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142012922
NCBI-ProteinID:
XP_074850070
LinkDB
All DBs
Position
4:80816971..81041629
Genome browser
AA seq
3286 aa
AA seq
DB search
MGQWPGCPGANSGREPGSRSLGAAGALALLLPLWLCAAGGCSAQLYNLSLTVAEGLPADT
LVGDIRAGLPAGEGDPGGFFLSEGSGESALLADFHVQPETGLIRTARPLDRERRARYSFA
AATLRGAVVQVEIAVSDVNDHPPRFPRDSLRIDVSELSPPGTAFRLPAARDPDAGRFGTQ
GYTLLAAGPEEAEPLFELRYGSPTEPPDLVLLRRLDRERADSHPLVLEAWDGGSPRRSGR
LRLEVRVLDENDNAPAFSQREYRARVREDAPPGTAVCRLLATDPDLGANGEVRYRIDRRQ
SDAAAYFAVEERSGLLRVNRPLDREARARHRLVVQARDGGAEPEVGSALVSIAVVDVNDN
RPAIRLLYLTEAGGARLSEAARPGDYVARISVSDPDEAEVGPSLSLQGGDGAFALRPGGA
AGLYFLCLEAPLDRERRDLYELRLSATDGGSPPLSAHETLLLRVTDINDQAPAFAQPRYR
AAVSEAAAPGTAVLRLSASDADEPGSPNAQVRYALEAAAGQPAGPELFRIDPRSGLVSTR
RRLDREREAALELRVVARDLGEPPLSASCLLSVRVEDANDNEPRFERQLYNASLAEHTAP
GRCPLQVKATDADVGQFGHIEYFLYDGFHNYEKSKAFQIDPHTGRICVCQDIDREEDPTT
YDLLVKATDGGGLSAQAFVRIEIEDINDNQPVFNPATYETTISSQTNPGTEIINVIATDR
DSGAYGVVTYELVPGEFSSLFTVDTSSGIIYLRSTLSQLDLIMVFLTVSALDGGGLTSVV
NATVTVNILQTTVAPAVFERSQYTFSVLEDVPGGSPVGTVKAREPLNSLEAISYKISSGD
PYGRFFIDPQFGIIVTKKQLDHETQPLVVLTVQSQFSSSPVYSSTQVNISVIDVNDNPPV
FLTESDKITISHSTPPGTALYIAHAEDKDSGLNGVIKYTVANRQLDAFTIDPSLGVVYLT
RSLFTDKQYEYALHVTAEDHGTPPLSSLLMLTVIIEEQKMDKTLTFENLVYQVEISETSS
LDAKILQVQAHPQVSQHATSQLVYSLEPNTDSVAFGIDPLTGWIYLRKHLNYEVTQIYNF
RAFVSIPEDRSGQNASTSVIINVLDENDNSPVFMNDLYFFEIEESPVPQGVVGTITAVDR
DSGRNGQVSYFLLSDGKYFKINSNTGEIINWVALDHEQQTHHHLIIFVTDHGAPQHNATT
TAYILVADLNDNQPYFPQISSGKEVTIKVLEGQPEGTLVTTLFAKDLDSGNNGVVLYSIS
SEESLGHFQIDANNGELRTTEALSYSWKPNYRILVTASDKGMPALQGHAVVNVQVVPFPE
GRAVFSQDVRHFVIPENIKPAQILSSVKLPGHHLQTNRKLHFSISEEVDDDHFEIDSSTG
DLFLSKALDYETTSHFLLRVIMKDYNKNPPQNYTVFLNIDVEDQNDHSPYFRDNFIVIGI
EENLPVGSLVYTFNAKDGDGSFLNSKVQYSIAASDSGENLFLIHPSYGTLITAVPIDREV
TNSVVLTVSASDQAANLTERRLGSLTAKIVILDINDNSPSFVSSSLSHVMENAEVGSLVH
HIIAKDPDEGRNGQVIYHILSGNKNEAFLLDKTTGLLTTAFPLDHESQDYYNLTIMALDD
GTPALSATQILTVSIVDVNDERPVFEKQLYEAAVSENQEPGEFVIEVNAVDRDSGINSLL
QYEILPGNGYEIFQINSDTGEVMTTASLDRETQEILSIKVLVRDRGTPSLSSTATVICKV
LDENDHTPEFLLPVPEIQIAENQEPAIVHTILAVDMDASNNGTLRYQIIGGNIGEYFTLN
DTSGELLAVRSLDREDVLNFTLIVECHDLGSPPRRSKTQLRITVLDENDNSPIFAKRSYQ
TSVREDLEEGSVVLELFASDEDDGLNGEIVYSLIDDTLGAFTVNSTTGTIVTTKALDRET
KSQYAFRAVASDCSIQGPRSTTVNIFVYIDDVNDNSPVFLQSPFRVYVPPQTSVSQIVAT
VRAEDMDLGLNGVLGFSFAGPETMFHIDIKTGEIYLQEPFPSEDFSTHLLVLASDQGVPA
RTATALLAVSTKEQEEVMSFSQNLYDVTIPENSEAGTSLLTVEAYDHNLMGKHIKYKIFS
DSEDIFSIHPITGELTVKEPKFLDHEVKSKAHLTVLAENGLNSAFCGVTVWIEDVNDNTP
KFEQSSYKTSVWEGQIYNTYVMQIFATDLDSGLNGEIEYSILSGNENKSFLIDSTWGILA
TNAILNREDISSYRLVVQAADRGTPRLSATSLVMVQVVDINDNSPIIQPLGKVEVSESAP
LGFQVTQVSASDVDLNPVLLYSFTDTSNLGMKFAINQHTGLITLVKPLDFEETARYKLWI
RVSDSVHQTEAELSIHILDVNDNPPVFTQDSYQVTVPELTPVGTSVLTVSAVDRDSEHNG
MISYRILSSYEGFSIDRKNGSIFTAKPVTQLGKSSVIQLLIEARDNGDPALTAVTSVEIQ
IQDVNNYAPQFTMALYNVSVSEDATVGGTVLTFSAIDYDWIHANTYVEYSIISTNTNNLF
RVETSVIKSTSFYKQVGNLVLSSPLDRETASSHHVIVLASDHGTPPLNSSATVLITVLDI
NDNPPVFGNQDYRIHVRESIPIDSHITVVSATDCDEGANAEVTYAIISGNDMGHFKLDEK
TGSVDLVRILDYEETMKFTLTIQASDGGVDVRNVAFSVVFVSVLDDNDHAPLFLFPSINC
AIHENLPAFSFLCSVYALDFDTGPYGHLTYSIQSSCLSDRGSPQDHDMFFIDSLTGDIQT
KQMLDYETQNKYCFVAQAKDKGDSVATLRVQVDVEGTDEFDPVFTENQYFFDLPEKNEAG
ELVGKVAASDSDGGLDGIIHYSLLKPSPLFSVNQINGNIYLTRTLHRKKSYTKRKDETLA
LLVTAHSPKLDSKSTTCTVLVNISNFPENYSIATANILSVSLTISFVVFLLLAISLIALI
LRYKRKEMINFCAKKESSSDDMSLTNEDSIPKDCQKFQSTESSTLQMGSITEWLNLVGIR
EKADIGNPSRQSDSSGHGSVEGEMAEDEEIKRINEHPCGKGSPLSVQGSQVPDLGIPRDS
DQLSCQSGETDVLSTTQNVQSFHTFKKEGGEGCDPTCTHNNMLSETLQEVGIKKRAIVTD
VTREYIVISDGPDCQCGSLATLVASDEDLRGSYTWDYLLSWEPRFQPLSSVFNDIAELKD
ENLQIHSFPNQKKSFIFPPPLITSVAQPGIRTVPPQMPTIIPRRAFKKYPQSPLIPNLRY
PSPALMPEFSPSLSLLTMQTPVMSDASLMGTYQIGPIHATEKEVQM
NT seq
9861 nt
NT seq
+upstream
nt +downstream
nt
atggggcagtggccgggctgcccgggggcgaacagcgggcgggagccggggagccggagc
ctgggggcggccggggcgctggcgctcctgctgccgctgtggctgtgcgcggcggggggc
tgctcagcccagctgtacaacctgagcctgacggtggctgaggggctcccggcagatacg
ctggtgggggacatccgggcggggctgcccgcgggcgagggggatccgggcggtttcttc
ctctcggagggcagcggcgagtcggcgttgctggcggatttccacgtgcagcccgagacc
ggcctcatccgcaccgcgcggccgctggaccgggagcggcgggcgcgctacagcttcgcg
gcggccacgctgcgcggggctgtggtgcaggtggagatcgcggtgagcgacgtgaacgac
catccgccgcgctttccgcgggactcgttgcgcatcgacgtgtccgagctcagcccgccc
ggcaccgccttccgcctgccggccgcccgggaccccgacgccggccgcttcggcacgcag
ggctacacgctgttggccgcggggccggaggaggccgagccgctcttcgagctgcgctac
ggctcccccaccgaaccgcccgacctggtgctgctgcggcggctggaccgcgagcgggcg
gactcgcacccgctggtgctggaggcctgggacgggggcagcccgcggcggagcggccgc
ctgcggctggaggtccgcgtactggacgagaacgacaacgcgcccgccttcagccagcgc
gagtaccgcgcgcgggtgcgggaggacgcgccgccgggcacggccgtctgtcgcctgctg
gccaccgaccccgacctgggcgccaacggcgaggtgcgctaccgcatcgaccgccgccag
agcgacgccgccgcctacttcgcggtggaggagcgcagcggcctgctgcgcgtcaaccgc
ccgctggaccgcgaggcgcgcgcccgccaccgcctggtggtgcaggcgcgcgacggcggc
gccgagcccgaggtgggcagcgcgctggtctccatcgccgtggtggacgtcaacgacaac
cgcccggccatccgcctgctctacctcaccgaggccggcggcgcccgcctctcggaggcc
gcacgtcccggcgactacgtggcccgcatctccgtctctgacccggacgaggccgaggtg
ggccccagcctgagcctccaaggcggggacggcgccttcgctctgcggccgggcggcgcc
gccggcctctacttcctgtgcctggaggcgccgctggaccgcgagcgccgcgatctgtac
gagctgcgcctgtcggccaccgacggcggctccccgccgctctccgcccacgagacgctg
ctgctgcgcgtcaccgacatcaacgaccaggcgcccgccttcgcgcagccccgctaccgc
gccgccgtctccgaggccgccgcccccggcacggccgtgctgcgcctcagcgcctcggac
gccgacgagcccggctcgcccaacgcgcaggtgcgctacgcgctggaggcggctgcgggg
cagcccgcggggcccgagctcttccgcatcgacccgcggagcggcctggtcagcacgcgc
cgccgcctggaccgcgagcgcgaggcggcgctggagctgcgggtggtggcgcgggacttg
ggcgagccgccgctctccgcctcctgcctgctcagcgtccgcgtggaggacgccaacgat
aacgagccgcgcttcgagcggcagctgtacaacgccagcctggccgagcacacggcgcct
gggcgctgtccgctgcaggtcaaggcaacagatgcagatgtgggccagtttggtcatatt
gaatattttctttatgatggattccataactatgaaaaatctaaagcatttcagatagat
ccacatacaggacgcatttgtgtgtgtcaagacattgacagggaagaggatccaaccact
tatgatctcttagtgaaagctacagatgggggcgggctaagtgcccaagcttttgttcgg
attgagatagaggacattaatgataatcaacctgttttcaacccagccacctatgagaca
accatcagtagtcaaacgaacccaggaacagagatcatcaatgtcattgccacagacagg
gattcaggggcatacggagttgtgacatatgagctggttccaggagaattttcttccctt
tttacagtggatacttcttcaggaattatttacttgcgatcaactcttagtcagttggat
cttatcatggtgttcttgactgtttctgcactggatggaggaggccttacctctgttgtt
aatgcaactgtcacagtaaacatcctccagaccactgtggcgccagctgtgtttgagagg
tcacaatataccttttctgttctggaagatgtccctggaggcagccctgttggaactgta
aaagcaagggagcctttaaattctttagaagcaatctcctacaaaatttcctctggtgat
ccttatggaagattctttattgaccctcagtttggtatcattgtcaccaaaaagcagctg
gaccatgaaactcagcctcttgttgtgcttactgttcagtcacagttcagcagctcccct
gtctatagtagcacccaggtcaatatatctgtgattgacgtcaatgacaaccctccagta
tttcttacagagtctgataagataactatatcacatagcacacctcctggcacagctctt
tatattgctcatgcagaagataaagacagtgggctaaatggggtaattaaatatacagtt
gcaaacaggcagttagatgcatttactattgatccaagccttggagtggtatatctcacc
aggtctctgttcacagataagcaatatgaatatgctcttcacgtaacagctgaagatcac
ggaactcctccactgagttctctgttaatgctgacagtgattattgaagagcaaaagatg
gacaaaaccttaacttttgaaaatttggtatatcaagtggaaatcagtgagacttcttca
ctggatgccaaaattctgcaagtacaagcccacccgcaagtttcacagcatgctacctca
cagttagtgtactccctggagcctaacacggattctgttgcatttgggattgaccctctc
actggctggatttacctccggaaacatctgaactatgaagtaacacaaatctacaatttt
agagcctttgtcagcatcccagaggatagatcagggcaaaatgcaagtacatcagtaatt
attaatgttctggatgaaaatgacaattccccggtgttcatgaatgatctttattttttt
gaaattgaggaaagtccagttccccaaggtgtggttggcaccatcacagcagttgacaga
gactcaggaagaaatggacaggtttcctatttcctcttgtcagatggaaaatatttcaag
attaattccaacacaggtgaaattataaactgggtcgcattagaccatgagcagcaaact
caccaccatttgatcatctttgtgactgaccatggtgccccacagcataatgccacaaca
actgcatatatcttagttgctgacctcaatgataatcagccttactttcctcagatttca
tctggaaaagaagtaactatcaaggtattggaagggcagccagaaggtacacttgtcacc
actctgtttgcaaaggaccttgattctggaaacaatggtgtagtgttatattccatatca
tcagaagagagtttaggtcacttccagattgatgcaaacaacggtgaattgagaacaact
gaagctctttcatacagttggaaacctaactatagaatactggtcactgccagtgacaaa
ggaatgcctgctcttcaaggacatgcagttgttaacgttcaggtagtcccatttcctgaa
gggagagctgtcttttctcaagatgtcaggcactttgtcattcctgaaaatattaagcct
gcacaaatattgagctcggtgaagcttcctggtcaccatctgcaaaccaacagaaagttg
cattttagtatctcagaagaagtggatgatgatcattttgaaatagatagttcaacaggg
gatctatttctttccaaggcacttgactatgagacaacatctcactttcttctgagagtt
attatgaaggattataataagaatcctccacagaactatactgtttttctcaatattgat
gttgaagatcaaaatgaccattctccttattttcgggataatttcatagtgattggcata
gaggagaatttacccgttggcagtctggtctacacgttcaatgcaaaagatggagatggc
agttttctcaacagcaaagtacagtattccatagcagcaagtgactctggtgaaaatctg
tttctcatccacccttcatatggcaccttgatcaccgcagttcctatagatagagaggtc
actaactctgttgtcctgacagtgtctgcctcagatcaggcagcaaacttaacagagcgc
agacttggttcactaactgcaaaaattgtcattttggacattaatgacaacagccccagt
tttgtgtcttcttctctttcccatgtcatggagaatgcagaggtaggctctttagtgcat
cacataattgcaaaggatccagatgaaggaagaaatggacaagttatatatcacattctt
tccggaaataagaatgaagcctttctgctagataaaaccacaggattgctaacaacagcc
tttcctttggaccacgagagtcaagactattacaatttgactatcatggctcttgatgat
ggcactccggcactttctgcaacgcagattctgactgtgagcattgttgatgtaaatgat
gagaggcctgtatttgaaaagcaattgtatgaagccgcagtctctgaaaaccaagagccc
ggagagtttgtcattgaggtgaatgctgtagaccgagattcaggaataaactccctgctt
cagtatgaaatcttgccaggaaatgggtatgagattttccagataaattcagatactgga
gaagtgatgacaactgcctcactcgacagggagacccaagagattctcagtataaaagta
ctggttagagacagaggaaccccttctttatccagcacagcgacagttatctgcaaagta
ctagatgaaaatgatcatacccctgagtttcttcttcctgttcctgagattcaaattgca
gagaatcaagagcctgcaatagtgcacactatactagctgtagacatggatgccagcaat
aatggaactttacgatatcagataattggtggaaatattggagaatacttcacactaaat
gacacgtcgggagaactcttggccgttcgcagcttagacagggaggatgtcctgaacttt
accctcatcgttgaatgtcatgacctgggcagcccaccaagaagatccaaaacacagcta
cggattacagtcctagatgaaaacgacaacagccctatttttgcaaagaggagctatcag
acctctgtaagagaagaccttgaagaaggatctgtagtccttgagctctttgcttcagat
gaagatgatggactgaatggtgaaattgtgtattcactgattgatgacactcttggagca
tttactgttaacagtacaactggcactattgttactacaaaagcactagaccgggaaacc
aaatctcaatatgcatttagagctgtggcaagtgactgtagcatccaaggcccaagaagc
actacagttaatatttttgtgtacattgacgatgtcaatgacaatagtccggtttttcta
cagagccctttcagagtttatgtgcctcctcaaacatctgtaagtcagatagtagccact
gtgagagctgaggatatggatcttgggctaaatggtgttctgggttttagttttgcaggg
cctgaaactatgtttcatattgacatcaagacaggagagatttatctgcaagagccattt
ccttccgaagatttcagtacccatctgctggtattggcttcagatcaaggtgtgccagct
aggacagccacagctctattggccgtttctacaaaggaacaagaagaggtgatgtcattc
agtcagaatttgtatgatgtaacaatacctgaaaacagtgaagcaggcacttcacttttg
actgtagaagcttatgatcataatttaatgggaaaacacataaaatacaagatattcagt
gacagtgaagacattttctccattcaccccataacaggtgaactcacagtgaaagagcca
aaatttcttgaccatgaagtcaagagtaaagcacatctcacagttttggctgaaaatggc
ttgaattcagcattttgtggagtgacagtttggatagaagatgtgaatgataatacacct
aaatttgagcaaagctcttacaaaacatcagtgtgggaaggccaaatctacaatacatat
gtcatgcagatttttgcaaccgaccttgacagtgggttaaatggagaaattgagtattcc
attttatctggtaatgaaaacaaatcattcctgattgattcaacatgggggattttagca
actaatgcaatcctgaatcgtgaagacatttcatcatacaggttggttgtacaagctgct
gatagaggaactcccaggctttctgctacaagtttagtaatggtacaagtagtcgacatt
aatgacaatagcccaattatccaaccactgggcaaagtggaggtctctgaaagtgcccca
cttggattccaagtgacccaagtttctgcaagtgatgtggacttaaatccagttcttctc
tacagctttacagacactagtaacctgggaatgaaatttgctattaaccagcacactgga
ctgatcacactggtgaaaccattagattttgaagaaactgctcggtataagttgtggatt
agagtttcagactctgtgcatcaaacagaagcagaactctccattcatattttggatgtc
aatgataacccaccagtatttactcaggattcctatcaggtgacagtgcctgagctcact
cctgtaggtacttctgtcctaactgtctctgctgtagacagagactcagagcataatgga
atgatttcttacagaatcctgtcttcatacgagggattttcaattgatcgcaaaaatggg
tcaatatttactgccaaaccagtgacacagctgggcaagagttcagttattcagcttctt
atagaagccagagataatggagaccctgctttgactgctgttacttcagtggagattcag
atacaggatgtaaataactatgccccccagttcacaatggcactatacaatgtgagtgtg
agtgaagatgccacagttggagggactgtcctcacattttcagccattgattatgactgg
atacatgcaaatacgtacgtcgaatactctattattagcaccaatactaataacttattc
cgtgtggaaacaagtgtcattaagtcaacatcattttacaagcaggttggcaaccttgtt
ttgagtagtccattggacagggaaactgcttcatctcaccacgtgattgttcttgcatct
gaccatggaacacctcccctgaattccagtgctactgtattgataactgtactagacatc
aatgataatccaccagtatttggcaatcaagattatcgcattcatgtcagagaaagtatt
ccaatagatagtcatatcactgtagtttcagcaactgactgtgatgaaggagccaatgca
gaggtcacttacgctataatatctggaaatgacatggggcattttaaattagatgagaaa
actggctctgtggatttggtcagaattttggattatgaggaaacaatgaaattcactttg
actattcaagcttctgatggaggagtcgatgtgagaaatgtggcattttctgttgttttt
gtcagtgtcctggatgacaatgatcatgctccactttttttgtttcccagcataaactgt
gctatccatgaaaatctacctgccttttcttttttgtgctcagtttatgcactggatttt
gatacaggtccctatggacaccttacatactcaatccagtcatcctgtttgtctgatcgt
ggatctcctcaagatcatgacatgtttttcatagatagtttgacaggagatatacagaca
aaacaaatgcttgattatgaaactcagaataagtactgtttcgtagcccaagcaaaagac
aaaggggactcagtagccacgttaagagttcaagtagatgttgaaggaacagatgaattt
gatcctgtttttactgaaaatcaatatttttttgatcttcctgagaaaaatgaagcaggt
gagctggttggcaaagtggcagcatctgatagtgatggtggattggatggaattattcac
tactccctgctaaaaccttctccattattttctgtaaatcaaatcaatggaaatatttac
ttaactagaactcttcacagaaagaagagctacaccaaaaggaaagatgagacccttgca
ttgttagtgacagctcacagccccaaactagactccaaatccactacgtgcactgttcta
gtaaatatttccaactttcctgagaattattccatagcaactgcaaatatcctgtctgtt
agcctgactatctcttttgtagtgttcctactgcttgccatcagccttattgcacttatt
ctgagatacaaacgaaaagagatgataaatttctgtgcgaaaaaagaatcatcatcagat
gatatgagcttgaccaatgaagatagtattccaaaagactgccagaagttccagagcact
gagagtagtacacttcaaatgggctccataacagagtggttgaatttggtaggcatcaga
gaaaaagcagatattggtaatcccagcaggcaatcagattctagtggtcatggctcagtg
gaaggggaaatggcagaagatgaggaaatcaaaaggatcaatgagcatccatgtggaaag
ggttcacctttaagtgtgcaaggctcacaagtgccagacttgggaattccaagagactct
gaccagttatcctgtcagtctggggaaactgatgtgttgtctaccactcaaaatgtacag
agcttccacaccttcaaaaaggaaggaggagagggctgtgacccaacctgtactcataac
aatatgttgtcagaaactcttcaagaagttgggataaaaaagagagcgatagtgacagat
gtcacaagagaatacatcgtcatctctgatggcccagattgccagtgtggatcacttgca
acccttgtagcatctgatgaggatcttagaggaagctatacctgggattacttgctttcc
tgggaacccagatttcagcctctgtcctctgtgtttaatgatattgcagaactgaaagat
gaaaacttacaaattcatagctttcctaatcagaagaaatctttcattttccctcctccc
ttgataacatcagttgctcagcctggaataaggacagtgcccccacaaatgccaactata
atacccagacgggcatttaaaaaataccctcagtctccccttattcctaatcttagatac
ccttcgccagccctgatgcctgagttttctccttctctgtctctgcttaccatgcagact
ccagtgatgtcagatgctagtctgatgggaacataccaaattggcccaattcatgcaact
gagaaagaagttcaaatgtag
DBGET
integrated database retrieval system
