Carettochelys insculpta (pitted-shelled turtle): 142013060
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Entry
142013060 CDS
T11194
Name
(RefSeq) interferon beta-like
KO
K05414
interferon alpha
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04060
Cytokine-cytokine receptor interaction
ciz04217
Necroptosis
ciz04620
Toll-like receptor signaling pathway
ciz04621
NOD-like receptor signaling pathway
ciz04622
RIG-I-like receptor signaling pathway
ciz04623
Cytosolic DNA-sensing pathway
ciz05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
142013060
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
142013060
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
142013060
04621 NOD-like receptor signaling pathway
142013060
04622 RIG-I-like receptor signaling pathway
142013060
04623 Cytosolic DNA-sensing pathway
142013060
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
142013060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ciz04052
]
142013060
Cytokines and neuropeptides [BR:
ciz04052
]
Cytokines
Interferons
142013060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Alp7A_like_C
DUF6630
Caps_syn_GfcC_N
Casein
Med26_C
DUF4446
Motif
Other DBs
NCBI-GeneID:
142013060
NCBI-ProteinID:
XP_074850209
LinkDB
All DBs
Position
5:38337729..38338286
Genome browser
AA seq
185 aa
AA seq
DB search
MTSKCLLHICLLLLFSTEISAQLCTMLHFQQNKVNKESLELLEKMSRNSIAQCLHERAAF
VQLPMPQKENANVAIQEILQEILNIFSKNLTQSAWDGASIDRFQNGLYQQVQRLETCLTV
HMEKEMTNPENEDLQFTIWSVKQYFQRIDSFLKEKQYSLCAWEIIRKEIFRCFVLIDKLT
RRLQN
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaagtgtttactccacatttgcctcctactgctcttctccacagaaatctca
gctcagctctgtaccatgcttcatttccagcaaaacaaggtgaacaaagaaagcttagag
cttctggagaaaatgagcagaaattccattgcacaatgcttacatgaaagagcagcattt
gttcaacttcccatgccccaaaaggagaatgccaatgtggctatccaagagatcctccaa
gagatcctcaacatctttagcaaaaacctcacccaaagtgcctgggatggggcttccata
gacaggttccaaaatggactttaccaacaagttcagaggctggagacatgtttgacagta
cacatggagaaggaaatgaccaacccagaaaatgaggacctccagttcaccatctggagc
gtgaaacaatactttcagaggatagactctttccttaaagagaagcaatacagcctgtgt
gcctgggagatcattcgcaaggaaatattcagatgtttcgtcctcattgacaaactcacc
agaagactccagaattaa
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