KEGG   Carettochelys insculpta (pitted-shelled turtle): 142013187
Entry
142013187         CDS       T11194                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
ciz  Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03420  Nucleotide excision repair
ciz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ciz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    142013187 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    142013187 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ciz04121]
    142013187 (ERCC8)
   03400 DNA repair and recombination proteins [BR:ciz03400]
    142013187 (ERCC8)
Ubiquitin system [BR:ciz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     142013187 (ERCC8)
DNA repair and recombination proteins [BR:ciz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      142013187 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_C WD_LRWD1 Beta-prop_EML ANAPC4_WD40 NBCH_WD40 Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 142013187
NCBI-ProteinID: XP_074850373
LinkDB
Position
5:93090533..93134834
AA seq 395 aa
MLAFISARQAGLDDPLRLRRAESTRRVLSLELNKDRDVERIHGSGINTLDIEPVERRYMI
SGGSDGVIVLYDLENFSRKPCYTCKAICSVGRSHPDVHKFSVETVQWYPHDTGMFTSSSF
DKTLKIWDTNTLQPADVFNFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSCSQ
ILQGHRQEVLAVAWSPRYEYVLATASADSRVKLWDVRRASGCLITLDQHNGEKSKASSEA
ANTAHNGRVNGLCFTSDGLHLLSTGTDDRMRLWNSSSGENTLVNYGKVCNESRKGLKFTI
STGCDPEFAFVPYGSTIAVYTVYSGELITMLRGHYSTVDCCVFQPNFQELYSGSRDCNIL
AWVPALREPVPDEDAEKQHLNPAFEDGWSSSDDEG
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgttggccttcatttcggcccgccaggccggcctcgacgatccgttgcgattgcgccgg
gctgaatctacccggagggtgttaagcttggagttaaacaaagatagagatgtggaaaga
atccatgggagtggtattaacacccttgacattgaacctgttgagagaagatacatgata
tcaggtggatctgatggtgttattgtactttatgaccttgaaaacttcagcagaaagcca
tgttatacatgtaaagcaatttgttctgtgggcaggagccatcctgatgtacacaaattc
agcgtagaaacagttcagtggtaccctcatgatactggcatgtttacatcaagctcattt
gataaaacattgaaaatatgggatacaaacacattacaacctgcagatgtgtttaatttt
gagggaacagtttatagccatcatatgtctccagttgctaccaaacattgcttaatagca
gttggtaccaaaagccccaaagtacagctttgtgacttgaagtctggatcctgttctcaa
attctgcagggtcacagacaggaagttctggcagtggcctggtccccgcgttatgagtat
gtcttggcaactgcaagtgctgacagtagagtaaaactgtgggatgtgaggagagcatct
ggatgtctgattactcttgatcagcacaacggggagaagtcaaaagcatcatctgaagca
gcaaacactgctcataatggaagagttaatggcttatgctttacaagcgatggacttcat
cttctgtctactggtacagatgaccggatgagactctggaatagttctagtggggaaaac
acattggtgaactacggtaaagtctgtaatgaaagcagaaaaggactcaaattcaccatc
tccactggctgtgatccagaatttgcatttgtaccatatggtagcaccattgctgtctac
acagtctactcaggagaactgataacgatgcttaggggacattatagtactgttgactgc
tgtgtatttcagcctaactttcaggaactatatagtggtagcagagattgcaatattctt
gcatgggttccagctttacgagagccagttcctgatgaagatgctgaaaagcaacactta
aatccggcatttgaagatggatggagcagcagtgatgacgaaggatga

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