Carettochelys insculpta (pitted-shelled turtle): 142013252
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Entry
142013252 CDS
T11194
Symbol
LOXHD1
Name
(RefSeq) lipoxygenase homology domain-containing protein 1 isoform X1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ciz03037
]
142013252 (LOXHD1)
04990 Domain-containing proteins not elsewhere classified [BR:
ciz04990
]
142013252 (LOXHD1)
Cilium and associated proteins [BR:
ciz03037
]
Other cilia and associated proteins
Stereociliary proteins
142013252 (LOXHD1)
Domain-containing proteins not elsewhere classified [BR:
ciz04990
]
Other domain-containing proteins
Others
142013252 (LOXHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
ATS3
DUF7755
Motif
Other DBs
NCBI-GeneID:
142013252
NCBI-ProteinID:
XP_074850459
LinkDB
All DBs
Position
5:116825900..117100885
Genome browser
AA seq
2496 aa
AA seq
DB search
MPTQMQYYNSSPSVTGILRPETVQCAYDSKRPRDPYPSHTAPRIQPSTGFQFRDVSPPRD
KPIWNDPRNKSEARTASLQRYRVTLNHRPVESVLSRKAPFAARTSSAGLSGHRYGRGCVD
VLLQYSSMNDPHLFDYYARKFGFQVSTRYLPTTEHVKRHHQTASQYKKKSVGTRSSSSVH
SKVLYKVMVKTGDKSGSGTDARVFLKMKGSKGKLSKTRLYKKTESNIAQQTAVFKLSKGS
VNTFKIHGPEIGDIRNITLEHDGLEKQQAWYVEEITVTNTSREKTWHFLCRQWLSLYHTD
CQISRTFTPTGKGTLTAVDGKPGHTVYEVVTVTGDVRGAGTDANVFVTLFGEFGITPKTH
LTSKSRTAFERDKTDVFRIKTNNVGQIKKIRIEHDNTGMNASWFLDRVVVTDMNRPHLRF
YFSCNNWLSKDEGDGLYVRDLIGSLNPMDVPKVNKYVVRVFTGDISGSGTDADVFINIFG
ENGDTGERRLDNDKDNFEKGAEDKFTLDAPNLGKLWKITIGHNNKGGSAGWFLEKVIIED
IGNKSVYEFPVGRWFALDEDDGKIQRDVLVGGSEATGIVYNVAVITGDVRGAGTNSKVHI
ILHGSKGLKNSGKIFLEGGEFERARTDLFNIEIAALLSPLSRVTIGHDNCGVSSGWFCEK
VVVYCPFTGIEQTFPCGKWLDEDEGDGLIERELYEMVSLRQKRLKKNPWSLWIWTSDIKN
AGTDASIFFQIYGDKGKSDEMKLDNNSDNFEAGQTDKFTVELPDLGTFYKLRIWHEKRSP
FAGWHLDKITLLKTLTKEKYTFNCGRWLDVNEDDNEIIRELPAEGPLVTEVMPVVKYRVT
VFTGTVSGSGTDANVFVNLIGDQGDTGERILYNSINTMNKFEKGSADEFYIEAVTLKQVR
RVRIGHDGKGGSSGWYLDKVIVREEGQPENQAVEFPCYRWLDKNEDDGQIVRELVPAGES
PILKNVSYHISVKTGDVPGASSDSKVFIKLYGEKANTSKEPLLVSDNDLGNYFERGRVDE
FTLETLDIGKINRLLIGHDNVGLRSGWFLACVQITVPVHGRQYMFPCNRWLDKDEADGKV
EVELYPSEIVSIDKLVNYEVSIVTGDVRGAGTNAKVFMQLYGETGKSELITLKSRSNNFE
RGTTDIFKVEAADVGKIYKLRIGHDGKGIGDGWFLESVTLKWMVMKVKETDKKKKKKKKK
SSEEEEEDSKPEEVMEVCKFVAHRWLATNEGDKELVVELIPEDGSGLEENTYEVHIITGN
VWGAGTDANVFLNIYGEGGGDSGERRLKRSNHLNKFEKGQEDIFTIKAIDLGILKKLRIR
HDNSSGNPAWLLDRVEIVDLKDSTRYYFPCQRWLAVEEDDGQIARELVPVDEAFIKKDSD
NDNQSLASLGLEQKAKSTTYTVKVKTGEKKNSGTDANVFLILYGSKDDTGIINLKASKTN
KNKFELGKMDEFTVESVDIGDLKKIKIGHDNKGGSPGWFLDWVEIDAPSLGQCLKFPCGR
WLDKSEDDGAIERDLFPAKLQTKEYVPFVPYEITTYTSDIFGAGTNADVFIVLYGSDGVC
SQQKSLCQNKREQRMCFERNSVDQFIVELEDVGDTIEKIRIGHKGGGLNSGWHLDRVEIR
RLLPNGKGSETITFPCQRWLAKSEDDGEIVRELVPSDIFTEKLMKDGTLKQIEEEVEEPL
EIHTYKISVFTGDVYGAGTDANVFLTIYGDLGDTGERKLSKSETNSNKFERAQEDKFTIQ
AVDLGIIYKIKIRHDNTMLNADWYLEKVEIVDDTTEESYLFLCERWLSTKKEDKRIERTL
YEQSCDGERSSMGNSSLSLKSQDSNANVKNKKKTSLIGTAQEGSLIPYHLIITTGKEYDS
STDSRVYIIIMGPQKVQTGRLWLDLPKNKKEFADGSVEKFSVMGLDVGEIKKLELGHDGA
TPESSWLVEELTLIVPTKGVMYTFVCKCWLARDRGDGLTSRVFNILDADCINIGHKILYE
VTVVTGDIQNAGTDTNIYMTLFGSSGNTEEMQLDKNGERFERGQEDTFIMEIADIAPLRK
MRIRTDGKGSRPDWFLEKIVMKNLSNQEVTTFTYSEWLSKLRNTKGALVCEMPAVINEEQ
MMENTTYTIQVKTSDIGGAGTDANVCLIMFGENGDSGTLALKESNKSNKFERNQMDVFNF
HDMLSLGDLCKVRVWHDNKGVAPGWHLEYIEVKDATLDKTFRFQCDRWLAKGEDGGQLIR
DLACANNDILELKERTSYEIATITRDTEDAETKENIWIILEGKKGRSKEFLMENSSKKRK
FTRGATDKFLFSSKNVGDIAAICVGHCPKDGKKSTIKADAYWQVQEIIITEMELCNKYFF
KCNAKIPLRSKRGDYKVFECAKVIESFASKARSSVPVKYEIIVVTGSEKGAGTDANVFIT
IFGINGDSGKRALKQKFRNLFERGKTNRFSLETLELGELKKVRLEHDNSGIATGWLVERV
EITNSATGVTTIFPCGKWLDKNRGDGLISRELFPRY
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atgccaacccaaatgcagtattataactcctctccttcagtgacagggattttgcgccct
gaaactgtacagtgtgcatatgacagcaagaggcccagagacccctatcccagtcatact
gcaccacggatacaaccgtccacaggattccagttcagagatgtttcacctcctcgggac
aaacctatttggaatgacccacgcaacaaatcagaagctaggactgcatctctccagaga
tacagagtaaccttgaatcacaggcctgtggaatctgtgctgagcagaaaagcacctttt
gcagcacgaacctcaagtgctggactgagtggtcataggtatggaaggggttgtgttgat
gtactgctacagtatagttcaatgaatgatccacacttgtttgactactatgccaggaag
tttggatttcaggtgagtaccaggtatcttccaactacagagcatgtgaagagacatcac
caaactgcatcccaatacaagaaaaagagtgtcggcaccagatccagctcttcagtacat
agcaaagtgctctataaagtcatggtgaagactggagataagagcggttcaggaaccgat
gccagggtatttcttaagatgaagggctccaaagggaaactcagcaaaacacgtttatat
aagaaaacggaatccaatatagctcaacaaacagctgtatttaaactctccaaagggtca
gttaacacctttaaaattcatggtccagaaattggagacatcagaaatattaccctggag
cacgatggtctagagaagcagcaagcctggtacgtggaggagataactgtgaccaataca
agccgtgagaagacttggcatttcctctgtcgacagtggctatcattgtatcacactgac
tgccagatcagccgcacctttacccccacaggcaaaggcacactcactgctgtggatgga
aaacctggccacacagtttatgaggtggtgaccgtgacgggagatgtacgaggagcagga
actgacgccaatgtctttgttactctctttggagagtttgggatcactccgaagactcat
ctcaccagcaagagtagaactgcctttgagagagataaaacagatgtgttccgaataaaa
actaacaatgttggacaaataaagaaaataagaatcgagcacgacaacacaggaatgaat
gcaagctggttcctggaccgtgtggtagtaactgacatgaataggcctcacctccggttt
tacttttcttgcaacaattggctgagcaaggatgaaggtgatggactttatgtcagagat
cttattggcagcctaaaccccatggatgtgcccaaagttaacaagtatgtggtcagagtg
tttaccggagacattagcggcagcggaacagatgctgatgtcttcattaatatctttggc
gagaatggagacacaggagagaggagattggacaatgacaaggacaactttgaaaaggga
gcagaggacaagttcaccctcgatgctccaaatttgggaaaattatggaaaattaccatt
ggccacaataacaagggtggctctgctggctggttccttgagaaggtgatcatcgaagac
attggcaacaaatcggtgtatgaattcccagttggtcgctggtttgcgttggatgaagat
gatgggaaaatccagcgggacgttcttgtgggaggaagtgaggccacaggtattgtttac
aacgttgctgtcataacaggggatgtccgaggggctggcactaactccaaggtccacata
atcctgcatggctctaaagggttaaagaacagtgggaagattttcttggaaggaggtgaa
tttgagcgtgccaggacggatctatttaacattgaaatagcagctcttctcagccccctg
agcagagtcacaattgggcatgataactgcggtgtcagttctggctggttttgtgagaag
gtggttgtttattgcccattcactggcattgagcaaacctttccttgtgggaaatggctg
gatgaagatgaaggagatggactgatagagcgggagctctatgaaatggtctccctgcgc
cagaagagactaaaaaaaaatccctggtcactttggatctggacaagtgacattaagaac
gcagggacagatgccagtatcttcttccagatttacggagacaaggggaagtcagacgaa
atgaaactggacaacaattcggataacttcgaagctggacagactgacaaattcacggtt
gagctccctgatcttggcaccttctacaagctccggatatggcatgagaagagaagccct
tttgctggctggcacctggacaagataactttgctgaaaacgctgaccaaagagaaatat
acattcaactgtggtcgttggctggatgtaaatgaagacgacaatgagatcatcagggag
ctccctgcagaaggacctctggtgactgaagtcatgccagtggtaaagtaccgggtgacc
gttttcactgggacagtaagtggaagtgggacagatgccaacgtctttgtcaacctcatt
ggggaccagggcgatacgggggagcgtatcctctacaacagcataaacaccatgaataaa
tttgagaaaggcagtgctgatgagttctacatcgaagcagtgactctgaagcaggtgagg
agggtgaggatagggcatgatggcaaaggaggaagcagtggctggtaccttgacaaagtg
atagtgagggaagaagggcagccagaaaatcaggctgtggaattcccatgctacagatgg
cttgacaaaaatgaagatgatggtcagattgttcgagagttagtaccagctggggagtca
ccaatcctgaaaaatgtcagctatcacatcagtgtgaagacaggggatgttcctggagcc
agctcagactctaaagtttttatcaaactgtacggtgaaaaggccaacaccagcaaggag
cctctgttagtttctgataatgacttaggcaattactttgaacgtggacgagtggacgag
tttactttagagacgctggacattggaaagataaaccgacttttgattggacatgataat
gtaggtctccgatctggttggttcctggcttgtgtccagatcacagtaccggtccatgga
aggcagtacatgttcccatgcaaccgatggcttgacaaagatgaggctgatgggaaggtg
gaggtggagctctacccaagtgagattgtgtccattgacaaattggtgaattatgaggta
tctatagttacgggggatgtgcgaggagcaggcaccaatgcaaaagtcttcatgcagctt
tatggcgagactggcaaaagtgagctgatcaccctgaaaagcaggtcaaacaactttgag
aggggaacaacagatattttcaaggtggaggctgcagatgttggcaagatctacaagctt
cgaattgggcatgatgggaagggcattggggatggctggttcctggaaagtgtcacactt
aagtggatggtaatgaaggtgaaagagacagataagaagaaaaagaagaagaagaagaaa
tcaagtgaggaagaggaggaggactccaagccagaagaagtaatggaagtctgtaagttc
gtggctcatcgctggctggctaccaatgaaggggataaggaactggttgtggaactcata
cctgaggatggatctggacttgaggagaacacttatgaggtccacatcatcactgggaat
gtgtggggtgctgggacggatgctaatgtcttcttgaacatctatggtgaaggaggagga
gacagtggtgagcgccggctgaaaaggtccaaccacctgaacaagtttgagaagggacag
gaagatatattcaccattaaagccattgatttgggaatactgaagaaacttcggattcgt
catgacaactccagtggcaacccagcctggctcctggacagagtggagattgttgatctc
aaagacagcaccaggtattatttcccatgccagcggtggttggcagttgaggaggatgat
ggtcagattgccagggagctggtcccagtggatgaagcatttataaagaaagattcggac
aatgataaccagtctcttgcatctctgggcctggaacagaaagctaaatcaactacttac
accgtgaaagtgaaaactggggagaagaagaattctgggacagatgccaatgttttcctc
attctttatggaagtaaagatgacacggggatcatcaatttaaaggcctccaaaacgaac
aagaacaaatttgagcttggaaagatggatgagtttacagtagaatctgtggacattggg
gacctgaaaaaaataaagatcggccatgacaataaaggtggctcccctgggtggtttctg
gactgggtggaaattgatgccccatcacttgggcaatgcctgaagttcccttgtggccgc
tggctggataaatcagaggatgatggagccattgagagagatctcttccctgcaaaactg
cagaccaaagaatatgttccatttgtcccttatgagatcaccacttacaccagtgacatc
tttggagctgggaccaatgcagatgtttttattgttctctatggaagtgatggagtttgc
agtcaacagaagtccctgtgccagaacaagagagagcaaaggatgtgctttgagagaaac
tcagtggatcagttcattgtggagctggaagatgttggagacactattgagaagattcgc
attgggcacaaaggcggagggcttaattctggatggcatttagatcgggtagagatacgg
agacttctgccaaatgggaagggttcagaaacaatcacatttccatgtcaaaggtggctt
gcaaaatctgaagatgatggtgagattgtaagagagcttgtaccatctgatatcttcacc
gaaaaactcatgaaagatgggacactaaagcagatagaagaggaagttgaggaaccacta
gaaattcatacttacaagatctctgtgttcactggcgacgtctatggtgctgggacagat
gcaaatgttttcttgactatatatggagaccttggggacaccggggagagaaaactcagc
aagtcagaaactaattccaacaagtttgaaagagcacaggaggataagttcacaatacag
gctgtggaccttggcattatatataagatcaagattcgtcatgacaacaccatgctgaat
gctgactggtacttggaaaaagtagagattgtagacgataccacagaagaatcgtacctc
tttttgtgtgagcgctggctttctacaaagaaggaggacaaacggatagaacggacactt
tatgaacagagctgtgatggtgaacggagcagcatggggaactcttctctcagcctgaaa
agccaagacagcaacgcaaatgtgaaaaataagaagaaaaccagcttgattggaactgca
caggaaggctcattgattccataccatctcatcatcactaccggcaaggaatatgattca
agcactgacagccgagtttacatcatcattatgggtcctcaaaaagtgcagacaggcagg
ctctggcttgatctcccaaaaaacaagaaagagtttgctgatggctcagtggagaagttc
tctgttatgggattagatgttggagaaatcaaaaaattggagctgggtcatgatggtgcc
acacctgagagctcctggctggtggaagagctaacactcattgttcccactaaaggggtc
atgtatacctttgtctgtaaatgctggctggccagggaccgaggggatggactcacttca
cgtgtcttcaacatcctggatgcagattgtattaacattggccacaagattctttatgaa
gttactgttgtgactggagacatccagaatgctgggactgatacaaatatttacatgact
ctctttggatccagtgggaacactgaggagatgcagctggataaaaatggagagagattt
gagaggggccaggaggacacttttatcatggagattgcagatattgcaccactcaggaag
atgaggatccggaccgatggaaaggggtcacgcccagactggttcctggaaaagattgtg
atgaagaacctatcgaatcaagaagtgaccacgtttacatacagtgaatggctgtccaag
ctcagaaatactaagggagctcttgtctgtgagatgcctgcagtgataaatgaagagcag
atgatggagaatacaacatacactattcaggttaaaaccagtgatattggaggagctggt
accgatgccaatgtgtgcttgattatgttcggggagaatggggacagcgggactcttgct
ctgaaggagtccaacaagtcaaacaagtttgaaaggaaccagatggacgttttcaatttt
catgacatgctgagcctgggagacctgtgtaaggttcgagtctggcacgacaacaaaggg
gttgcacccggctggcatttggaatacattgaagtgaaagacgccaccctggataagaca
ttccgcttccagtgcgatcgctggctggctaaaggtgaagatggtggacagctcataaga
gacctggcctgtgccaataacgacatcctggaactgaaggagcggacctcatatgagatt
gccacaataacgcgtgacacagaggatgcagaaaccaaggaaaacatctggatcatcttg
gagggaaagaaggggcgctccaaagaattcctaatggaaaactcctccaagaaaaggaaa
ttcacaaggggagcaacagacaaatttctcttttcttcaaagaatgtcggtgatattgca
gccatctgtgtcgggcactgtccaaaagatggaaagaagtcaaccataaaagctgatgca
tactggcaagtccaagagataatcataacagagatggaactttgcaacaagtattttttc
aagtgcaatgcaaaaattccactgaggagcaagagaggggactacaaagtctttgagtgt
gccaaggtcatagagagttttgccagcaaggcccggagctcggtgccagtcaaatatgag
atcattgtggtgacagggtctgaaaaaggagctgggaccgatgccaacgtcttcatcacc
atctttggaataaacggtgactcgggcaagcgtgctctcaagcagaagttccggaacctc
tttgaacggggcaaaactaataggttttccttggaaaccctggaattgggggagctgaaa
aaagtccggcttgaacacgacaacagcggcatagccactggctggttagtggaacgggtg
gagatcaccaactctgccactggggtgaccacgattttcccttgtgggaagtggctggac
aagaacagaggagatggtttgatctcaagggagttatttccaagatattaa
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integrated database retrieval system
