KEGG   Carettochelys insculpta (pitted-shelled turtle): 142013314
Entry
142013314         CDS       T11194                                 
Symbol
POLR1E
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA49 isoform X1
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
ciz  Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ciz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    142013314 (POLR1E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ciz03021]
    142013314 (POLR1E)
Transcription machinery [BR:ciz03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     142013314 (POLR1E)
SSDB
Motif
Pfam: RNA_pol_I_A49 DUF6157
Other DBs
NCBI-GeneID: 142013314
NCBI-ProteinID: XP_074850624
LinkDB
Position
5:complement(1823415..1850577)
AA seq 412 aa
MAAAARWCYRGDPQEAQSAPLVQFSNGKLQTSENMDFTLYKNKDDTNPRKKLQRILTLET
DRLSYVGKNFGSGVLKCNSLCRYFVGVLDKDSGKMEVYNAESFNMQPLLSDEIIEDDPSD
YQNKSYREKVDSCIEAFGTNKQKRALNSRRMNEVGSETLNVAVTKAAENIIETKGVAALV
SDAAQHDLQDVSLFLPPCHEDADKPEDVYKFEDILAPAEYEALQTPAAAFVNMTPEQILK
KTEEKSHCSFVLEELRSMPRDEASADRKARCLWFLDVLIKFSFQKVIKKKYAMGPDCPPI
INNKLLKNFTAQTYNNGRLQNLISASMKAKITAYAIALALHINSFQTDLTVLQRDMKLRE
NKVLEVAKAMKLKISKRKGTAGLLDEDDHKLATLSLPLPVYKPTQGKRRKMK
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggccgctgccgcccgctggtgctaccggggggacccccaggaggcgcagagcgccccg
ctcgttcagttctcaaatgggaaactgcagacttctgaaaacatggattttactttgtac
aaaaacaaagacgatactaatcccagaaagaaactccaaagaatcttgactttggagaca
gacaggctttcttatgtgggaaaaaactttggctcaggagtcctgaaatgtaactccctg
tgcaggtactttgtcggtgtgctagacaaggactctgggaaaatggaagtctacaacgct
gaatcattcaacatgcagccgttgttgtcagatgaaataatagaggatgacccatcagat
tatcagaataaatcctacagagagaaagtggattcatgtattgaagcttttggcaccaac
aagcagaagcgagccttgaactctcggaggatgaatgaagttggcagtgagactttgaac
gtagctgtgacaaaagcagcagaaaacatcatcgagacaaaaggtgtcgctgctttagtc
agtgacgctgctcagcatgacttgcaagacgtctccctcttcctacctccctgccacgag
gatgctgacaaaccagaggacgtctacaagtttgaggacatcctcgccccagctgaatac
gaagcactgcagacaccagctgctgccttcgttaacatgactcctgagcagatcctgaag
aagacagaagagaagagccattgctccttcgttctagaagagctgaggtccatgccccgg
gatgaggctagcgcagaccgcaaggcgcggtgtctctggtttctggatgtcctcatcaag
ttcagcttccagaaagtgattaagaagaaatatgcaatgggccccgactgtccacccatc
attaacaacaaactcttgaaaaacttcaccgcccagacctacaacaacggcaggctccag
aacttgatctcagcttcgatgaaggctaaaatcaccgcctacgccatagccttagccttg
cacattaacagcttccagacggacctgaccgtgctgcagagggacatgaaactccgcgag
aacaaagtgctcgaggttgcgaaagccatgaagctgaagatctccaaaaggaaggggact
gctggactgctggatgaagatgaccacaagttggccaccttgtcgctgcccttacctgtg
tacaaacccacccaggggaagcggaggaagatgaaataa

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