Carettochelys insculpta (pitted-shelled turtle): 142013393
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Entry
142013393 CDS
T11194
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
142013393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ciz03009
]
142013393
Ribosome biogenesis [BR:
ciz03009
]
Eukaryotic type
Pre-60S particles
RNases
142013393
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
zf-C2HC_3
Motif
Other DBs
NCBI-GeneID:
142013393
NCBI-ProteinID:
XP_074850813
LinkDB
All DBs
Position
5
Genome browser
AA seq
1022 aa
AA seq
DB search
MEPGKSTQELERIKKAIESVKTEVEEGQKKLCQYNLQDEIPKNSLISGTYVKGICTSPDH
NHLCCSLTKGKCPVAPISKNSKKDCHLSSSKYVIDRSCPATDLEYDPLLNYSAGLLSSST
MKEEENDTPQLKQVKMPPDSHVISPKMSPCGNGHVSPKKRSRSSSPIKLEIKLQESDDDD
ELVIDAPPLMVTKKPRTSRNLEKNKKNLWNNDNAEDPLKCITEKRVDVTVTLQKDVNTDV
CSHEKSLKMSPKPQNIHLSDVRMNALKSSNNLNEQRKSSVSKENTISSVSHIKGQIQKET
LMKEYPDSEITVKISNVEELSDKCKNINCKGEAQTSLSFEAVLNDNTELGAQGTVNIEEN
QLIQENEVLGNVLIHPSAPLKLEEKVCYGIDLLTKNSSGESKSENQCTAIKDSEVILLDS
SSEETECSEEDTELSESDDPIEECRRIFNEFVENEAQKKEIAKQVLGAHPEIDALDTKTD
MVPGQKKRIAHTAKFDVQTNKEILVPFKAPFPQQASHTRILQAQQQAAQITAAVKSGQAF
VAATSGQKKTVPVLSTHIQNIGPMVCLNLLEVQPVATSSAQLNVFLQGNAVTTMPCRPSN
IAIKRIAPMPLKVSSRRRPSVVSESGSKVPHETRQRYVNFFVEEYLKVCGTVNEAFDKAL
VEEKAIYDRCGSKNMYLNIAVNTLKKLRDQGSLSPNGQSSGSRCASATGSRKSDEKNDFT
GVVIYRLLKDYVLTEEQMCELDYPQSNPDKPGSAVLGNGIIKTAVSDASKRVCCRCGEIY
TVTASGKHIRKEECNYHSGRVLRHKVPGGLETRYSCCEGIVGSPGCQVAKLHVHDGRKEN
LEGFVKTFIKPAQADGNHGVFALDCEMCYTTQGLELTRVTVVDSNLQIAYDTFVKPDNEI
IDYNTRFSGVTEEDLKNTSSSIRDVQAILLNLFSADTILIGHGLENDLFALKLIHTTVVD
TAVVFPHRLGLPHKRALRNLMADYLRRIIQDDVGGHDSSEDAAACMELMLWKVKEDAKGR
KW
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggagccaggtaaaagtacacaagaattggaaagaatcaaaaaagcaattgagtcagtc
aagactgaagttgaagaagggcagaaaaaactctgtcagtataatttgcaagatgaaata
cctaaaaactctttgatctctggaacatatgttaaaggaatttgtacttctccggatcat
aatcatctgtgttgctctcttacaaaaggcaaatgtcctgtagctccaatctcaaagaac
tctaagaaagactgtcatttgtcatctagtaaatatgttattgaccgtagttgtccagca
actgaccttgaatatgatccactgctaaattattctgcaggtctactgagctcttccaca
atgaaagaggaggaaaatgacacaccacaattgaagcaagtgaaaatgcctcctgattct
catgtgatatctccaaaaatgtctccatgtggaaatgggcatgtatccccaaagaagaga
tcaagaagctcttcacctataaagctagaaatcaagcttcaggaatctgatgatgatgat
gaactagttattgatgcaccaccactgatggtcactaagaagccaagaacgagtaggaac
ttggaaaaaaacaaaaaaaacctgtggaacaatgacaatgcagaagatcctctaaagtgt
atcacagaaaaaagagtggatgtgacagtaactctgcaaaaggatgtcaacacagatgta
tgcagccatgaaaaatcactgaaaatgtcaccaaaacctcaaaatatacatttgtctgat
gtgagaatgaatgctttaaagtcttcaaataatcttaatgaacaaagaaaatcttctgtc
tccaaggaaaatacgatatcttcagtttctcatattaagggacagatacagaaagaaact
ttgatgaaagaatatccagacagtgaaataacagtgaaaatatctaatgttgaggaactc
agtgataaatgtaaaaacataaattgtaagggagaggcacaaactagcttgtcttttgaa
gctgtcttaaatgacaacaccgagctaggtgcacaggggactgtaaacatagaagaaaat
cagttaatacaggaaaatgaagttttgggaaatgtactcattcatcccagtgcacccttg
aagttagaggagaaagtttgttatggtatagatctcttgactaagaacagtagtggagaa
agtaaaagtgaaaatcagtgcactgccatcaaagacagtgaagtcattttattagattct
tcttcagaagagacagagtgtagtgaagaggatactgaactatctgaatctgatgaccct
atagaagaatgccggagaattttcaatgagtttgttgaaaatgaagcacagaagaaagaa
attgctaagcaggttcttggagctcaccctgaaatagatgcattagatactaagacagat
atggttcctgggcagaagaaaagaattgcgcacactgcaaaatttgatgtacagaccaac
aaagagatacttgtgcctttcaaggcaccttttccacagcaggcttctcataccagaatc
ctgcaagctcagcaacaggcagcacagataacagctgctgttaaaagtgggcaagctttt
gttgctgcaacttctggacagaagaaaactgtgcctgtgttgtctactcacattcaaaac
ataggaccaatggtatgtttaaatttgcttgaagttcaacctgttgcaaccagcagtgct
caactgaatgtattccttcaaggaaatgctgtaacaacgatgccctgcagaccttctaat
attgcaataaaaaggattgctcctatgcctcttaaggtttctagtcggagaaggccttct
gtggtttcagaatctggatctaaagttccacatgagacaaggcaacgatatgtcaacttt
tttgttgaagaatatttgaaagtttgtggaacagtaaatgaagcttttgataaggcattg
gtagaagaaaaagcaatttacgatcgctgtggcagtaaaaatatgtatttgaacatagct
gtgaacacccttaaaaagctgagggatcaaggcagtctttctccaaatgggcagtcttct
gggagtagatgtgccagtgctactggatctagaaaatcagatgagaagaatgattttaca
ggtgtcgttatttatagacttctgaaagactatgttctcactgaggaacaaatgtgtgag
cttgattacccacagtcaaaccctgacaaacctggcagtgctgtattaggtaatggcatt
ataaaaacagctgtatctgatgcttccaaaagagtatgttgtagatgtggagaaatatac
actgttactgcttcaggaaagcacattcgtaaagaagaatgcaactaccattctggcaga
gtactcagacacaaagttcctggtggcttggaaacacggtatagctgttgtgagggaata
gttgggtctcctggatgtcaggttgcaaagctccatgtccatgacggccgaaaagagaac
ctggaaggctttgtgaagacattcatcaaaccagctcaagctgatggaaatcatggtgtg
tttgcactggactgtgagatgtgttacacaacacaaggtctggaacttacaagggtgaca
gtggttgactccaacctacagattgcctatgatacgtttgttaaaccagataatgaaatc
atagactataatactagattttctggagtgacagaagaggacttgaaaaatacatcatca
tctattcgagatgtacaggcaatattgctaaatttgttcagtgctgatactattttaatt
ggacatggcttagaaaatgatttatttgctcttaagctaattcataccactgttgtggac
acagcagtggtgtttcctcatcggctaggcttgcctcataaaagagcacttagaaacctt
atggctgactatctcagacgaattattcaggatgatgttggtggtcatgattctagcgaa
gatgctgctgcttgtatggaactgatgctttggaaagtaaaggaggatgctaagggcaga
aaatggtga
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