Carettochelys insculpta (pitted-shelled turtle): 142013458
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Entry
142013458 CDS
T11194
Name
(RefSeq) interferon beta-like
KO
K05414
interferon alpha
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04060
Cytokine-cytokine receptor interaction
ciz04217
Necroptosis
ciz04620
Toll-like receptor signaling pathway
ciz04621
NOD-like receptor signaling pathway
ciz04622
RIG-I-like receptor signaling pathway
ciz04623
Cytosolic DNA-sensing pathway
ciz05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
142013458
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
142013458
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
142013458
04621 NOD-like receptor signaling pathway
142013458
04622 RIG-I-like receptor signaling pathway
142013458
04623 Cytosolic DNA-sensing pathway
142013458
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
142013458
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ciz04052
]
142013458
Cytokines and neuropeptides [BR:
ciz04052
]
Cytokines
Interferons
142013458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
IBV_3A
GrpE
Mito_carr
S1CSD-TOTE-1
Motif
Other DBs
NCBI-GeneID:
142013458
NCBI-ProteinID:
XP_074850943
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All DBs
Position
5:complement(38407547..38408152)
Genome browser
AA seq
201 aa
AA seq
DB search
MIHRSFLHFCLMLLFSSEISCLDCRRLHVLQTKMNRKSLEHLEEMGGNFPFQCVHERTAF
KPGDVLKIRLSRQENAKAAIQQILQDLLQIFNNNLTQAAWNGTVIEQFQNGLHLQTEKLE
TCLSAELETERTYPGNESFLRTSLKLKRYFQTIHQFLNEKQYGRCAWEIVRREISRCFVF
LNILTKRLENEGTTHFFFLKN
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaggagtttcctgcacttttgcctcatgctgctcttctccagtgaaatctct
tgtctggattgcaggaggcttcatgttctacaaaccaaaatgaacagaaagagcttagag
catctggaggaaatggggggaaactttcctttccaatgtgtacatgaaaggacggctttc
aaacctggagacgttctcaagatccgactgtcccggcaagagaacgccaaggcagccatc
cagcagatcctccaagacctcttgcagatcttcaacaataatctcacccaagctgcatgg
aatgggactgtcatagagcaattccaaaatggacttcacttgcagactgagaagctggag
acatgtttgagtgctgagctagaaacggagagaacctacccaggaaatgagagcttcctg
cgcaccagcctgaagctgaagagatacttccagacaatacaccagttcctgaatgaaaag
caatacggccggtgtgcctgggagatcgtccgtagggaaatctccagatgttttgtcttc
ctcaacatactcacaaagagacttgaaaatgaaggtaccacacatttctttttcctaaaa
aactaa
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