Carettochelys insculpta (pitted-shelled turtle): 142013511
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Entry
142013511 CDS
T11194
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
142013511 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ciz04131
]
142013511 (DMXL1)
Membrane trafficking [BR:
ciz04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
142013511 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
142013511 (DMXL1)
RAVE complex
142013511 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_DCAF4
MIOS_WD40
Beta-prop_WDR19_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
142013511
NCBI-ProteinID:
XP_074851089
LinkDB
All DBs
Position
5:40657989..40813153
Genome browser
AA seq
3088 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSLQGQPLTVYASGCDIVILGTDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNMICIFEPVTVLKQKSNHPAGVYYHWQKSGQILLDSVAHNITW
DPTGTHLLTGSSCLQLWSNIDLEDQSEDGNFERTDVNFGDWQCIWQCKTASEVCLMKFSP
DGEFFATAGKDDCLVKVWYNTNGWRSAVAPQSSSSQKQAQDVDFSFVYLAHPRSVNGFSW
RKTSKYMPRGAVCNVLLTCCKDNVCRLWAETLLPNDSLSCAAGYNYSAEAANLTNNFKRN
ASSKERIQNALESNLRPFRRGRRRSLTLIAHTGYSPHQKDPHEVHRNTPLHANALCHFHI
AASINPATDIPLLPSITSLSLGENEEKSGPFVVHWLNNKELHFTLSMDVFLQQLKKSLEQ
HSSENSTEESNQLVGKSDEEADDSGEDQKGNREKKELGSEKTLPNSGCVPLSSAIIDHKM
EILLTEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDA
NSLCRSIVMYACTKNVDLAIQQGKQKPLGLTRSSSMLISSGHSKSTNSLKLRIFTPNVMM
ISKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHN
ALRSPDVDSTKQTNDASNSGESPLRSQSRGTTGVTSQDPNAVYSELILWRVDPVGPLSFS
GGVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYQAIIDA
KKLLCELSNPEISKYVGEVFNIVSQQSTARPGCIVELDAITELHGRKTQLLHVFQEDFIL
NSHEERASEKNNCLTDPAGNLQNGFSGKFYLIVIEYTQNRSLLHMWNLHLKSSPVSVDGK
IDSPILEAASHQEELYPSSPDPEKIQSPFTQKYRACRANLQSTSRLTLSSEMVYSQELNL
PDGVEIISVKPSAGHLSSSSLYPVCHAPYLLATSCSDGKVRFWRCRVSPESLVSSVPEYT
VNSNVTYMWEEWPLLVEDGLLSSSAVTVPGRPIEVSCAHTNRLAVAYKQMTSKNSHCSQD
FMMHVSIFECESTGGSSWILEQTLHLDEISPMLGSAISIDSNLMAYSKQESCLYNNESTL
PSTKHLVHLDWMSREDGSHILTVGIGSKLYMFGQLAGNIHDQSSKEISVLPLWENAKVTS
LCRFVLLRCVDLVSSVEGSPPLPVSLSWVRDGILVVGMDCEMHVYSQWQPPSKQEPVMTD
SYGGSTPSISSLMKQSQSAGSGLHPPKRTLTRSMTGLAQKLSGKRNVFDLSVQMEDAGVF
EAAHALCPTLPQYHPFQLLELMDLGKVRRTKAILSHLVKCIAGEVVVVDESEPNLDRRLR
SLTISASGSTARDPKTFNKTENTDYTEIDSVPPLPLYALLAADDDCSHFCLEKSKNQINV
NKPNGLPDENYEDLFQNPSLNTDDLTVFEGDENNTKPKVIDLSQYSPTYFGPEHAHVLSR
HLLHSSLPGLTRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVQLHT
FLTTSLPPVHRAQLLHQGLSTRHFAWAFHSVAEEELLNMLPAVQKGDPTWSELRAMGVGW
WVRNIHSLRRCIEKVAKAAFQRNNDPLDAAVFYLAMKKKAVIWGLYRSQKETKMTQFFGN
NFTEDRWRKAALKNAFSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLGDIQLALVISRL
YESEFEVSNMYKYILQKRVLGNAHLSKESSSNMHCDPFLRSMAFWILEDYSRALDTLIKQ
PAGNEEDENSASTSCDPSVFNFYNYLRTHPLLLRRHFGSSETASTRICLSVENGLADKIN
LSERRLFFTTAHAHLKAGCPMLALEVLSKMPKVVKKSKPFCPNSSLMDTGKGFSPSSPIR
LETKEDKASAVDWSEPVLNGLGSSSECSSDKQSSSALSFDWSQPSLTFQDEPLELKWDSD
KDEESEDSSLVMKDLKPLQKMTGEKLDETSSNYSESFSAVDENYLLSPSEDVISAQLKFR
ACLKILTVELRTLSTGYEVDGGKLRYQLYHWLEREVVALQKTCDYSIEVKEVQPGINMTT
DEIALSENTEDRSDQQKALLQRENFHERRQWLLKYQSLLRMFLSYCILHGSHGGGLASVR
MELILLLQESQQEKSIQTLPNPLPEQNSIPLLFACTASAKTVVASPLLHLSNLTHDILHA
VINLDSPPHPETQNNKIHVMHTLAASLSACIYQCLCGSPSYSSLQANQFTGTVYQTLLLT
RHTVRTTSLDETVTPNTSPAQWPGITALVRLLNSAGEEAQPGLTVLLCEILTAVYLSLFI
HGLATHSSSELYRIMAHPFNDKMWSAVFGGGAHIPSRGQMQQKTKSGRHFSVPSPHQVVV
FSMECVGFSKSLAAISTDSPTKHAASSSSVDDGQKQQRIFTLSSKISSKESAQSPCLEEQ
ESPSYREKFIPPELSIWDYFIAKPFLPSSQSRVEYDSEESQGSDDEDDAFASDLHLQEHS
NSNSYSWSLMRLAMVQLVLHRLKNFYPLAGHDLSELPVSSPLCHAILKTLQLWEQVLLRR
LEIHGGPPQNLISAHTSEDTLSAGPALLRHKALLEPTNTPFKSNSHAALSVKRLWQYLVK
QEVVQETFIRNIFTKRRCLNESLEDHSETIKNTMMEEAIFNKVEAEMGYPGGKARIIHKE
SDIITAFAVNKANRNCIAIASSHDIQELDVSGILATQIYTWVDDDTEMEAKGSDDFLIIH
AHDDLANVQGTTPYTHSNPGTPINVPWLGSTQTGRGASVLIKKTTNNVRRMASHPSLPYY
LTGAQDGSVRMFEWGHSQQITCFRSAGNARITRMRFNHQGNKFGIVDADGYICLYQTNWK
CCPLTGSTPKPYLTWQCHNKTANDFVFISSSSLIVTAGQATDNRNICLWDTLVASANSLV
HAFICHDSGATVLAYAPKHQLLISGGRKGFTCIFDLRQKQQRQLFQSHDSPVKAIAVDPA
EEYFVTGSAEGNIKVWSLSTFNLLHTFINEHARQSIFRNIGTGVMQIETGPGNQIFSCGA
DGTVKMRILPDRFSPEDEVLKNEVKFML
NT seq
9267 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcaccaggtgctgacgggcgccgtgaaccccggggacaactgcttctccgtg
gggagcctccagggccagccactcacggtttatgcatcaggatgtgacattgttatcctg
gggactgattttgaaagattacaaataatccctggagcaaaacatggaaatattcaagtg
ggatgtgtggactgttcaatgcaacaagggaaaattgcagcttcttatggaaacatgatt
tgtatttttgagccagttactgtcctgaaacagaagagcaatcatcctgctggggtatat
taccattggcagaagagtggtcaaattttactggactccgtagcccataatattacgtgg
gatcccacaggcactcatctcttaactggttccagctgtctgcagctttggtccaatatt
gatttggaagaccaatccgaagatgggaattttgaaagaacagatgttaactttggggac
tggcaatgtatctggcagtgcaaaactgcttccgaagtttgtctaatgaaattttcacca
gatggagaattctttgctactgcagggaaggacgactgtcttgtaaaagtatggtataat
accaatggctggcgatctgcagttgctcctcaaagttcaagttcacaaaaacaagcacaa
gatgttgatttttcatttgtttacttggcccatcctcgatctgtaaatggattttcatgg
aggaagacaagcaaatacatgccacgtggcgctgtgtgcaatgtgctgctgacttgttgc
aaggataatgtatgccgtctctgggcagagactttgttacccaatgatagtttatcatgt
gctgctggatacaactattcggctgaagcagcaaacttaacaaataacttcaaaagaaat
gcttccagtaaggagcgaattcaaaatgctttagagtcgaatctaaggccctttcgacga
ggaaggagaagatcacttaccctcatagcacatactgggtattctccacatcagaaagat
cctcatgaagttcataggaatactcctttgcatgcaaatgcactttgtcactttcatatt
gctgccagcatcaatccagccacagatattcctctactcccttctatcacatctctgagt
ctcggtgagaatgaagaaaagagtgggccatttgtagtgcactggctgaacaataaagaa
ctacattttaccctatccatggatgtatttttgcaacagcttaaaaagagcttggagcag
cattcttcagagaacagcactgaagagtcaaatcagttggttgggaaatcagatgaagaa
gctgatgatagtggagaagatcaaaaaggaaatcgagagaagaaggaactgggaagtgag
aaaactcttccaaattctggctgtgttcctttatcttctgctattattgatcataagatg
gaaatactattgactgagtggagcaaaaatgcagacatgctgttcagtattcatcccatg
gatggttcattgctggtatggcatgtggactggttagatgaatatcagcctggtatgttt
cgacaggtgcaggtttcttttgtttcaagaattccagtagcgtttccaacaggtgacgcg
aattctctttgcagaagtatagtgatgtatgcctgcaccaagaatgttgatcttgctatt
cagcaaggcaaacagaagccccttggcctaacacgttcatcatctatgcttatctcttct
ggccacagtaaatcaactaacagtttaaaattacgtatcttcacccccaacgttatgatg
atttcaaaacatgcagatgggtctttaaaccagtggctagtcagtttcgcagaggaatct
gctttttcaactgtgctcagtatttcacataaatctcgatattgtggtcaccgttttcat
cttaatgacctggcttgtcattccgtgttacccttgctactaacaacttctcatcataat
gctctaagatcaccggatgttgacagcacaaaacaaacaaatgatgcttcaaattctgga
gagtcacctttaagatcacagagtagaggcactacaggtgtaacatcccaggatcccaat
gcagtttatagtgaacttattctttggcgagttgacccagttgggcctttatccttttct
ggaggagtttctgaacttgcacggattaattctctccatgtttcagcgttttctaatgtg
gcatggctgcctacacttatacccagttactgtcttggtgcatactgcaattctccaagt
gcatgctttgtggcaagtgatggacaatatctgagattatatcaggctatcatagatgct
aaaaaactgttatgtgagctatccaatcctgaaatttctaaatatgttggtgaagttttt
aacattgtaagtcaacagtctactgcaagaccaggatgcattgtagagttggatgctatt
acagaattgcatggcagaaaaacacagttacttcacgtttttcaagaagacttcattttg
aatagccatgaggagagagcatctgaaaagaacaactgtttaacagaccctgcaggaaac
ctgcaaaatggattctctggaaaattttacttgatagtaattgaatacactcaaaaccgt
tcgttactacacatgtggaacttacacttgaaatccagtccagtctcagtggatggaaaa
atagactcacctatacttgaagcagcatcacatcaagaagaattatatccatcctctcca
gatccagagaagatccagtctcccttcacacagaagtatcgggcctgtagagcaaacctt
caaagtactagtcgtctgactctttcttcagaaatggtctatagtcaagagttgaattta
ccagacggagtggaaataataagtgttaaaccatcagcagggcacctgagctcctcttcc
ctgtatccagtttgtcatgccccttatctcctggcaacttcttgctctgatggaaaagtt
aggttctggagatgcagagtatctcctgagtcactggtttcttctgtgccagagtatact
gtaaatagtaacgtgacatacatgtgggaggaatggccgttacttgttgaggatggactt
cttagtagtagtgctgtgactgttccaggcaggccaattgaagttagttgtgcacataca
aatagattagctgtagcatacaagcagatgacatctaaaaatagtcactgttctcaagat
ttcatgatgcacgttagtatttttgaatgtgaatctacaggaggatcaagttggattcta
gaacagactcttcatttagatgaaataagcccaatgttgggttctgccattagtattgat
agtaatttaatggcatacagtaaacaagaatcttgtttatataataatgaaagtactttg
cccagtacaaagcacttggttcacttagactggatgtctagggaagatggatcacatatc
ctaacagtaggaattggatcaaagctgtatatgtttggccagttggctgggaacattcat
gaccaaagtagcaaggagatctctgtgcttccactatgggaaaatgcaaaagttacatcc
ctttgtaggtttgtactgttacggtgcgtggacttggtttcttcagtggaagggtcacct
cctttgccagtttctttgtcctgggtacgcgatggcatccttgttgttggcatggattgt
gaaatgcatgtttattctcagtggcagcccccatcaaaacaagagccagttatgactgat
tcttacggtggaagcacgccctctatcagtagcttgatgaaacaaagccagtcagctggt
tctggcttgcatccaccaaagcgaaccttaaccagatccatgacaggtcttgcacagaaa
ctcagtggaaagagaaatgtatttgacctctctgtacaaatggaagatgctggtgttttt
gaagcagctcatgcattatgtccaactttacctcagtaccaccctttccaacttctagag
cttatggaccttggtaaagtacgtagaacaaaagccatcctgtctcatttggttaagtgc
attgctggggaagttgttgttgtggacgaatctgaacctaatcttgatcggcgacttaga
tctctcacaattagtgctagtggaagcactgcaagagatcccaagacattcaacaagact
gagaacacagactatacagaaatagactctgttccaccacttcctttgtatgcattgctt
gctgcagatgatgactgctcacatttttgtttagagaaatccaaaaatcaaattaacgta
aataaaccaaatggtttgccagatgaaaattatgaagatctatttcaaaaccccagccta
aatacagatgatcttactgtgtttgaaggagacgaaaataatacaaagccaaaggttatt
gatctttctcagtatagcccaacttactttggaccagagcatgcccatgttctttcccgt
cacttgctgcattctagcttaccaggtctcaccagaatggagcaaatgtcactgatggcc
ttagcagatacaattgctactactagtactgatattggagaaagcagagacagaagccag
ggtggagaaactcttgatgaatgtggcttaaaattccttctggctgttcagctacacacg
tttctgacaacctcactgcctcctgtccatcgagcccagttacttcaccaaggcttgtct
actcgtcactttgcctgggcatttcattccgtagcagaagaagagctactgaacatgctc
cctgctgtgcagaagggggatccaacctggtcagagctcagagcaatgggtgtaggatgg
tgggttcggaatatccatagtttacgaagatgcatagaaaaggtagccaaagcagctttt
caacgaaacaatgatccacttgatgctgctgttttttaccttgcaatgaaaaagaaggct
gtgatttggggattatacaggtcccaaaaagaaacgaagatgacacagttctttgggaac
aattttactgaagacaggtggcgtaaagcagcattaaagaatgctttttctttattaggc
aaacagcgctttgaacattctgcagcatttttcttgttggctggtcacttgaaggatgca
gttgaggtctgccttgaaaaattgggtgacattcagctggctcttgtaatatcaaggctt
tatgagtcagagtttgaagtatctaacatgtataaatacatactccagaagagagtttta
ggaaatgcacatctcagcaaggagagctcatcaaatatgcattgtgatccttttctacga
agtatggcgttttggattctggaagattatagcagggctcttgatacactaattaagcaa
cctgctggaaatgaagaagatgaaaatagtgcctccacaagttgtgacccttcagtgttc
aatttctataattatctaaggacacatcctctcctgttgagacgtcattttggctcttct
gaaacagcctcaacacgcatttgtctatctgtggaaaatggactggcagacaaaataaat
ttaagtgaaagaagattgtttttcactacagcacatgctcatttgaaagctggttgtcct
atgttggctctagaagtgttgtcaaagatgccaaaagtggtcaagaagtccaaacctttt
tgtccaaattctagtttaatggacactggtaaaggcttttcaccttcttcaccaataaga
ttagagacaaaggaagataaagcttctgctgttgattggtcagaaccagtactaaatggg
ttgggatcatcttcagaatgttcatcagacaaacagtccagctctgctctttcttttgat
tggagtcaaccaagtctaacattccaagatgaaccattggagctaaagtgggatagtgac
aaagatgaagaaagtgaagattcttctcttgtaatgaaagatttgaaacctttgcagaag
atgacaggtgaaaagctagatgaaactagttctaactattcagagtctttcagtgcagtt
gatgaaaattatctcttaagtccatcagaagatgtaatctcagcacagctgaaatttaga
gcatgtttgaagattcttacagtagagcttcgtacattgtccactggttatgaggtagat
ggtggaaagctgcgataccagctttatcattggcttgaaagagaagtggtagctcttcaa
aaaacatgtgattacagcattgaagttaaggaggtacagccaggcattaacatgactact
gatgaaattgcattgagtgaaaacactgaggatcgatctgaccagcaaaaagccctgctg
cagagagagaattttcatgaaagacggcagtggctcctaaaataccagtccctcctgagg
atgtttcttagttactgtatacttcatggatctcatggaggggggttggcatcagtgaga
atggaactaattttgcttttacaagaatctcaacaggaaaagtcgatacaaacacttcct
aatcctctgccggaacagaactccatacctcttctatttgcctgcacagccagtgccaaa
acagtggtggccagtccattactgcatctcagcaacctgactcatgatatattacatgct
gtaataaaccttgattcaccacctcacccagagacccagaataataagattcatgtaatg
catactttagcagcatcactctctgcctgcatttaccaatgcctttgtggtagccccagc
tacagttcattacaagcaaaccagttcactgggacagtttaccaaaccctgctgcttacc
cgacacactgtaagaacaacaagtttagatgaaactgtaacgcccaatacatctccagct
cagtggccaggaataacagctcttgttcgtcttttgaattccgctggtgaggaagcccag
ccaggcctcacagttttactttgtgaaattttaacagcagtctatcttagtctcttcatt
catggtctagcaacgcattccagcagtgaattgtataggattatggcccatccttttaat
gacaaaatgtggtctgctgtctttggtggaggagctcatattccaagcagaggacagatg
caacagaaaacaaaatctggtaggcacttctctgtgcctagcccacaccaggtagtagtg
ttctccatggaatgtgtggggttttccaaatcccttgctgccatcagtactgatagtcct
accaaacatgcagcttcttcctcctctgtagatgatggtcagaagcaacagagaatcttt
acactgtcatcaaaaatctcatcgaaagaaagtgcacagtctccatgtttggaagagcaa
gaatctccatcttatagggaaaagtttatccctcctgagcttagtatctgggactatttc
atagcaaagccttttcttccatcctcacaaagtagagtggaatatgattcagaggagagt
cagggaagtgatgatgaggatgatgcttttgcatcagatttacaccttcaggagcactct
aattcaaattcttacagttggtcactcatgcgattggctatggttcagttggtgcttcat
aggctgaagaatttctaccccttggctgggcatgatctttcagagcttccagttagctcc
ccactgtgccatgccattctgaagacattgcagctgtgggagcaagttcttctccggcgg
cttgagatacatggtggtccacctcagaatttaatttctgctcatacttctgaggataca
ttatctgcaggtcctgctctgcttcgccacaaagctttgcttgaacctacaaatactcct
ttcaaatctaacagccatgctgcactgtctgtgaagaggctttggcagtatctagttaaa
caagaagtagtccaggaaacctttatcagaaatatatttacgaagcgaagatgccttaat
gagtcattagaggaccacagtgaaaccatcaaaaataccatgatggaggaggcaatcttc
aataaggtagaagcagaaatgggatatccaggaggcaaagcaagaattattcataaagaa
tctgacatcattactgcttttgctgtcaataaagcaaacaggaactgcattgcaatagct
tccagccatgacattcaagaactagatgtttctgggattctagctacacagatctataca
tgggttgatgatgacacagaaatggaggcgaaagggtctgatgacttcttgattatacat
gctcatgatgacctagcaaatgttcagggtactacaccttatacacacagcaatcctggc
acacctatcaatgtgccttggcttggtagtacacagactgggagaggtgcatcggtgctg
atcaagaagactactaataacgtgagaagaatggcttcccatccatctctaccttattac
ttgacgggtgcgcaagatggtagtgtgagaatgtttgaatggggtcattcacaacaaatt
acatgtttccgctctgctgggaatgcgagaataacgcgaatgagattcaatcaccaagga
aataagttcgggattgttgatgcagatggatacatatgcttgtatcagacaaactggaag
tgttgcccacttaccggaagcacacccaaaccatatctgacatggcaatgtcataacaaa
acagccaatgactttgttttcatcagttcctcctctttgatagtcacagctggacaagcc
actgataacagaaatatatgtttatgggataccttagttgcatctgcaaatagtttagta
catgcatttatctgtcatgatagtggggccactgtgctggcatatgctccaaaacaccag
cttttaatatcagggggtagaaaaggctttacttgtatatttgatcttcgccaaaagcaa
caacgacagctattccagagtcatgattctccagttaaagcaattgctgtggatcctgca
gaagaatactttgttacaggatctgcagaaggcaatataaaggtatggagtttgtctacc
tttaatcttcttcacacgttcatcaatgagcatgctcgacagtcaatcttcagaaacatt
ggaacaggggtcatgcaaattgagacaggaccaggaaatcagatattctcctgtggagct
gatggaacagtaaaaatgagaatattgcctgaccggtttagcccagaagatgaagtgttg
aaaaatgaagttaagtttatgctctga
DBGET
integrated database retrieval system
