Carettochelys insculpta (pitted-shelled turtle): 142013809
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Entry
142013809 CDS
T11194
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04068
FoxO signaling pathway
ciz04110
Cell cycle
ciz04120
Ubiquitin mediated proteolysis
ciz04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142013809 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
142013809 (SKP2)
04150 mTOR signaling pathway
142013809 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
142013809 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ciz04121
]
142013809 (SKP2)
Ubiquitin system [BR:
ciz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
142013809 (SKP2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_9
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
142013809
NCBI-ProteinID:
XP_074851761
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Position
5:complement(105322810..105391167)
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AA seq
426 aa
AA seq
DB search
MLLREAAMHRKHLQEIPASSSNVSPSFTWSWDSSKTSELLSGMGVSVLKKENLGSENTPQ
ELLMPLCPPQKRQKVKEKDKDFVIARRPRLLRETESGVSWDALPDELLLGIFAYLPLIDL
LRVSQICKRWQRLAFDESLWQTLDLTGKNLLPGVIGQLLPVGVTVFRCPRSCIGKPLFKN
NRPLRVQHMDMSNCTINVMDLHAVLCRCDRLQNLSLEGLVLSDDIIRSIAQNSGLVRLNL
SGCSGFSAEALEMMLISCSELEELNLSWCDFTADHIKASVNHISANVTQLNFSGYRQNLQ
IPDVKILVTRCPYLVQLDLSDSAMLKPECFQYFHQLICLQHLSLSRCYQISPADLLELGE
IPTLKTLQAFGIVTDNSLQLLKETLPHIKINCSHFTTIARPTVGSKRNQEIWGMKCRLTL
RNPSDL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgcgcgaggccgctatgcacaggaaacatctccaggaaatcccagcttccagc
agcaatgtttccccaagcttcacatggtcctgggactcctccaagacatcagagctgctc
tcaggcatgggagtttctgtccttaagaaagagaatctgggcagtgagaacacccctcag
gaactgctcatgcccctttgtcctcctcagaaacgacagaaggtgaaagagaaggacaaa
gattttgtgattgcacgtaggcctaggctgctccgagagacagaatcaggtgtttcttgg
gatgcactgccagatgaattgctgttggggatctttgcatatttacccctaatcgaccta
ctaagagtttctcagatttgcaaaaggtggcaacgcctagcgtttgatgaatcgctgtgg
cagacccttgatctgactggtaaaaatctgctgccaggagtgattgggcagttgcttcct
gtgggtgtaactgtatttcgttgtccaagatcctgtattgggaaaccattgtttaaaaac
aaccgacctcttagagtacaacatatggacatgtccaactgtacaataaatgttatggat
cttcatgctgttctgtgtcgttgtgatcggctacagaatctcagcttggaaggactggtg
ctttctgatgatatcattagaagcattgctcagaattctggcttggtgcgattaaatctc
tctggatgttctgggttttctgcagaagcactggagatgatgctgatcagctgttctgaa
ctggaagaactgaacttgtcctggtgtgacttcacagctgatcacattaaagcatcagtc
aaccacatttctgcaaatgtaacccagttaaattttagcgggtacagacaaaatctgcag
ataccagatgttaaaatactggttacaagatgcccttatctcgtccagttagatttaagt
gacagtgcaatgttgaagcctgaatgttttcaatattttcatcagctcatctgcctacag
catttgtctcttagcagatgttatcagatatctcctgctgacttacttgaacttggtgaa
attcccacactaaagactcttcaagcttttggaatagtgactgacaattccttacagctc
ctaaaggaaacgcttccccacataaagatcaattgttcacattttacaactattgcacgg
ccaactgttggcagcaaaaggaatcaggagatctggggtatgaaatgcagactgacgctg
agaaatcctagtgatttatga
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