Carettochelys insculpta (pitted-shelled turtle): 142013826
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Entry
142013826 CDS
T11194
Symbol
ZFR
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ciz03041
]
142013826 (ZFR)
Spliceosome [BR:
ciz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
142013826 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
142013826
NCBI-ProteinID:
XP_074851801
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All DBs
Position
5:107343962..107391579
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AA seq
1071 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAQYSQQPASGVAYSHPTTVASYT
VHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGYTQRQQ
EAPPPPPPVTTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTAAAAAVAAAQPQPSVAESYY
QTAPKAGYTQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVPS
YTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAAAAAAAAATAAWTGT
TFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQ
NTSNNSTSARGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPN
VVTQATSSTSASASKPTASASNIATSSSTVNSSITSSAVKILTPTSSTTINAAANNKVSV
VAANVPVKKISTPKINFVGKYRSGNKLQTTGNKQEDMKAVENVKSTPSVAVVQTQEVKPD
TASEPVTPTTLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKG
RRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYE
EDMYWRRMEEEQHHWDDRRRIPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPDSSD
DRYVMTKHAAIYPTEEELQAVQKIVSITERALKLVSDSMTEQEKNKGKEGDDKKDGSKDR
ALKGVLRVGVLAKGLLLRGDRNVNLVLLCSEKPSKTLLTRIAESLPKQLAVISPEKYEIK
CAVPEAAIILNSCVEPKMQVTITLTSPIIREENMRDGDITSVMVKDPPDVLDRQKCLDAL
AALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASGPQS
PGDALRRVFECISSGIILKGGPGLLDPCEKDPFDTLALMTDQQREDITSSAQFALRLLAF
RQIHKVLGMDPLPQMNQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgcccggtagtttccttcacctatgtgcccagccggctgggggaagat
gccaaaatggccaccggcaactactttggattcacccatagcggggctgctgcccagtat
agccagcagccagcttcgggtgtagcctattcccatccaactacagttgctagctacact
gtccatcaggctccagtagctgcacacacagttactgctgcctatgccccagcagcagct
acagttgcagtagccaggcctgcaccagtcgctgttgcagctgctgcaacagctgccgcc
tatggaggctatcctacagcacatacagcgacagactacggttacacccaaagacaacag
gaagcaccaccaccaccacctccagtaactacacaaaactaccaggattcctactcatat
gttagatccacggccccagctgtggcttatgacagcaagcagtactaccaacaaccaaca
gcagctgcagctgcagttgctgctgcccagcctcagccttcggtagctgaatcatactat
cagacagctccaaaagcagggtatactcaaggagcaactcagtatactcaagcccagcaa
actcgacaagtgacagccataaaaccagccaccccaagtccagctacaactactttctcc
atatatcctgtatcctccactgtacagccagtagcagctgcagcaactgttgttccatcc
tatactcagagtgctacatacagtacaacggcggttacttattctggtacctcttattca
ggctatgaagccgcagtatattcagctgcatcgtcctattaccagcagcagcagcagcaa
cagaaacaggcagcagcagcggctgctgctgctgccgcaacagctgcctggacagggacc
acctttactaaaaaggcaccattccaaaataagcaactgaaaccaaaacaacctcccaaa
ccaccacagatccactattgtgatgtttgtaaaatcagctgtgctggaccacagacttat
aaagaacatttggaaggccagaaacacaaaaagaaagaagcagcattaaaagcatctcag
aacaccagcaacaacagtacttctgctcgtggaactcagaatcagttgcgctgtgagctc
tgtgatgtgtcttgtacaggagcagatgcatatgctgcccatattcgtggagctaaacat
cagaaggtggttaaattgcacacaaaacttggcaagcccattccttcaactgaaccaaac
gttgttacccaggctacttcctcaacatctgcttctgcttccaaaccaactgcctctgca
tcaaatattgcaactagcagcagcactgtgaactcctccattacatcttcagcagtgaaa
atccttactcccacatcaagcacaacaattaatgcagcagccaacaacaaagtgtctgta
gttgctgctaatgtacctgtaaagaaaatatctacaccgaaaataaactttgttggcaag
tacagaagtggtaataaactacagacaacaggaaataaacaggaagatatgaaagctgtt
gaaaatgttaagagtactccttctgttgctgttgtacagacccaggaagtaaaaccagat
acagcatcagaaccagtgactcccacaactcttgctgctttacagagtgatgtccagcca
gtgggtcatgactatgtggaagaggtacggaatgatgaagggaaggtgatccgctttcac
tgcaaactttgtgagtgcagctttaatgatcctaatgccaaggagatgcatctaaaagga
aggcgacacaggcttcaatacaaaaaaaaagtaaatccagatttgcaagtagaagtaaaa
cccagtattcgagcaaggaaaattcaggaagagaagatgagaaagcagatgcagaaagaa
gaatattggagaagaagagaagaggaggaacgttggaggatggaaatgaggcgctatgag
gaggacatgtactggaggaggatggaggaggaacagcatcactgggatgaccgtcgccga
atacctgatggaggatatcctcacggccctccaggacctttaggcttgctaggtgtcaga
ccaggaatgcctcctcagccccagggaccagctcctctgcgtcgtccagactcatccgat
gaccgttacgtaatgaccaaacatgcagccatttatccaactgaggaggaacttcaggct
gtccaaaaaatagtttccatcactgagcgagccctgaaacttgtgtctgacagcatgact
gagcaggagaagaacaagggcaaggagggagatgataagaaagatggcagtaaagacaga
gctttgaaaggagtcttacgagtaggagttttggctaaaggcttgcttctccgtggagac
cgaaatgtcaaccttgttttgctctgttctgagaagccttcaaagacattactcactcgt
attgcagaaagtcttcccaaacaacttgcagtaataagtcctgagaagtatgaaatcaag
tgtgcagtaccagaagcagcaataattttgaattcatgtgtggaacccaaaatgcaagtt
acaatcacattgacatctccaatcattcgagaggagaacatgagggatggagatataacc
tcggttatggtgaaagacccaccggacgtcttggacaggcaaaaatgccttgacgctctg
gctgctctacgccacgctaagtggttccaggctagagctaatggtctgcagtcctgtgtg
attatcatacgtattcttcgtgacctctgtcagagagttccgacttggtctgattttcca
agctgggctatggagttactagtagagaaagcaatcagcagtgcttctggaccacaaagc
cctggggatgcactgaggagagtttttgagtgtatatcttcaggaataatcctaaaaggt
ggtcctggccttttggatccttgtgaaaaagatccttttgatacacttgctttaatgaca
gaccagcaacgagaggatattacttcaagtgcacagtttgcgctgagactccttgcattc
cgtcaaatacacaaagttctaggaatggatccattgccacagatgaaccaacgtttcaat
attcataacaatcgtaaaaggagaagagatagtgatggggttgatggctttgaagcggag
gggaaaaaagacaaaaaagactatgataacttttaa
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