Carettochelys insculpta (pitted-shelled turtle): 142014112
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Entry
142014112 CDS
T11194
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ciz03041
]
142014112 (PRPF39)
Spliceosome [BR:
ciz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
142014112 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Mad3_BUB1_I
TPR_16
TPR_19
TPR_12
FAT
Motif
Other DBs
NCBI-GeneID:
142014112
NCBI-ProteinID:
XP_074852244
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All DBs
Position
6:3584485..3630819
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AA seq
681 aa
AA seq
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MQNSDHTEDDSNQSNDNRIKSTDAAGEQLTDFSTEIMSVTEMEQSPASSPDVNETTQESI
IPDIQSLHTSDVEAHFPPEYEKFWRVVEENPQDFTGWVYLLQYVEQENHLLAARKAFDKF
FTHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETVDPSD
PETNNTIRGAFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAIYDRILGIPTQLYS
HHFQRFKEHIQNNLPRDLLTPEQFIQLRRELASVSGHSGDDAPPGDDLPAGIEDITDPAK
LITEIENMRHRIQEIHQEMFNHNEHEVSKRWIFEEGIKRPYFHVKPLEKAQLKNWKEYLE
FEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACTIHLPRKP
MLHMLWAAFEEQQGNINEARRILKTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQEA
VKNAKSNGELSFYAIKLARHLFKVQKNLPKARQVLLEAIERDKENTKLYLNLLEMEYSGD
LKQNEENILTCFDKAVNGALSIKMRITFSQRKVEFLEDFGSDVNKLLDAYDEHQTLLKEQ
DSLKRKAENGSDEPDEKKAHRDDAALASTQMMDGDMQANQVAYNYNAWYQLDSPKCWQSQ
LCVICTFDLSLYGRVINKYVE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcagaactccgatcatacagaggatgactctaaccaaagtaatgacaacagaattaag
agcactgatgcagcaggagagcagcttacggactttagtacagagattatgagtgtcaca
gagatggaacagtctcctgctagctctcctgatgtaaatgagaccacacaagagagtata
ataccagacattcaaagtttacacacatctgatgttgaggctcatttccctcctgaatat
gagaagttctggagagtagtagaggagaatccccaggatttcacaggctgggtgtatctg
ctgcagtatgtagagcaggagaaccacttgctggctgccaggaaggcatttgacaaattc
ttcacacattatccatattgctatggatattggaaaaagtatgcagaccttgaaaagcga
catgacaacattaaacagtctgatgaggtgtatcggagagggctacaggcaatacctctt
agtgttgatctctggatacattatataaacttcttaaaagagacagtggatcctagtgac
cctgaaactaacaataccataagaggagcctttgaacacgcagtcttagctgcagggaca
gatttccgctctgataaactatgggaaatgtatataaattgggaaaatgaacagggcaac
ctacgtgaagttacagctatatatgatcgtatcctggggattccaacacagctctatagc
catcacttccagaggtttaaagaacacatacaaaataatttgcctcgagacctcctaaca
cctgagcagtttattcagctgcgccgggaattggcttctgtcagtggccatagtggggat
gacgcgccacctggagatgaccttcctgctggcattgaagacatcactgaccctgcaaag
ctaatcactgaaatagaaaacatgaggcatagaatccaagagattcatcaagaaatgttc
aatcacaatgaacatgaagtcagcaagaggtggatctttgaagaaggaataaaacgacct
tacttccatgtaaaacctttggagaaagcccagttgaaaaactggaaagagtacttagaa
tttgagatagaaaatgggactcatgagcgagttgtggtcctttttgaaagatgtgttatt
tcatgtgccctctatgaggacttctggattaagtatgccaagtacatggagaatcacagc
attgaaggagtgagacatgtctacagcagagcctgtaccatacaccttcctaggaaacca
atgcttcatatgctatgggctgcctttgaagaacaacaggggaatatcaatgaagcaaga
agaattttgaaaacatttgaagagtgtgttcttggacttgcaatggttcgcttgcgaaga
gttagcttagaacgccgacatggaaacatggaagaagctgaacaccttcttcaggaagct
gttaagaatgcgaaatcaaatggtgaattgtcattttatgccatcaaactagctcgacat
ctcttcaaagttcagaagaaccttccaaaagcaagacaagtgctgttggaagccattgag
agagacaaagagaacactaaattgtatcttaacttgcttgaaatggagtatagtggggat
ctcaagcaaaacgaagaaaatattctcacgtgttttgacaaggctgtcaatggtgcattg
tctataaaaatgaggattacattttctcaacgaaaagtggaatttctggaagatttcggt
tctgatgtgaacaaacttttggatgcctatgatgaacatcagacacttttgaaagagcag
gattctttaaaaaggaaagcagaaaatggatcagatgagccagatgagaagaaagcacat
agagatgatgcagctttggcatctacacaaatgatggatggagacatgcaagctaatcag
gttgcctataattataatgcatggtatcagcttgattctccaaagtgttggcaatcccag
ctttgtgtcatctgcacatttgatctctctctctacggacgggtcattaataaatatgtt
gaataa
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