Carettochelys insculpta (pitted-shelled turtle): 142014185
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Entry
142014185 CDS
T11194
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04137
Mitophagy - animal
ciz04140
Autophagy - animal
ciz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
142014185 (HIF1A)
04137 Mitophagy - animal
142014185 (HIF1A)
04148 Efferocytosis
142014185 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142014185 (HIF1A)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
142014185 (HIF1A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
142014185
NCBI-ProteinID:
XP_074852419
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All DBs
Position
6:15028617..15067488
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AA seq
808 aa
AA seq
DB search
MESSGEKKRISSDRRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLT
ISYLRMRKLLDASDLETEAKMEKEMNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMGLT
QFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVN
IKSATWKVLHCTGHVRVYDTCNNQAHCGYKKPPMTCLVLICVPIPHPSNIEVPLDSKTFL
SRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTG
QYRMLAKRGGYVWVETQATIIYSSKNAQPQCIVCVNYVLSEIVHKELFFSLGQTECVLKP
VESGDTNMTKIFNKVDLEDTNSLFEKLKTEPDALTLLAPAPGDTIISLDFSSNESDEQQF
DDVPLYNDVMLPSSSEKLQNINLAMSPLPASETTKPLRSNADPALNREVVSKLEPNTEPL
ELAFSSRQRQEQPASPSDASTNQSSPEAHSPSDYCFDVDNDMANEFKLELVEKLFAIDTE
AKNPFSTQETDLELEMLAPYIPMDDDFQLRSFDQPPSLESGCANSQSVTSTIFHQTQTLS
PATEEITPVKTECMDDIKTLIVSQSPVLIINEPNSTPASPYGGNRSRTASPIRAGKGTLD
QTEKSYPGTPNLLTVTFSNRSAPVDEELNPKMLALHNSQRKRKMEYDGSLFQAVGIGSLF
QQSGDCGTNASLCWKRVKGCKSNSQNGVGQKTIILLSTDIASKLLGQSMDETGLPQLTSY
DCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggagagctccggcgagaagaaaaggattagttcagatcgcagaaaagagaagtctaga
gatgcagccagatgcagaagaagcaaggaatcggaagtgttctacgaacttgctcaccag
ctgcctcttcctcatactgtgagcgcacaccttgacaaggcctcaattatgaggctgact
atcagctacttacgcatgagaaagctgttagatgcaagtgacctggagacagaagccaaa
atggagaaggagatgaattgcttttacttaaaagcccttgatggatttgtcatggttctt
tctgaggatggtgacatgatatacatgtcggaaaatgtgaacaagtgtatgggtctcact
cagtttgaactgactgggcacagtgtgttcgactttactcatccatgtgaccatgaagag
ctgagggaaatgcttacacatagaaatggtccagtgaaaaagggcaaagaacagaataca
gagcgtagctttttcctgagaatgaagtgcacactcaccagcaggggaaggacagtgaat
ataaagtctgcaacctggaaggtacttcactgcacagggcatgttcgtgtgtatgacacc
tgcaataatcaggctcattgtggatataaaaaacctcccatgacgtgcttggtgctgatc
tgtgtacctatccctcatccatcaaatattgaagtccctttggacagcaagacattcctc
agtcgccacagcttggatatgaaattttcatattgtgatgaaagaattacagaactgatg
ggatatgagccagaagaactcttgggtcgctccatctatgagtactatcatgctctggac
tctgatcatctgaccaaaacacatcatgatatgttcacgaaagggcaggtgactacagga
cagtacagaatgcttgctaaacgtggtggatatgtctgggttgaaactcaagcaactatt
atatacagctctaagaacgcccaaccacagtgcatagtgtgtgtgaattacgtcttgagt
gaaattgtccacaaggagttgttcttttcccttggacaaactgagtgtgtactgaaacca
gtggagtctggtgatacaaacatgaccaaaatattcaacaaagttgacctggaagatact
aacagcctctttgaaaaacttaaaacagaacccgatgctttaacgttgcttgcaccagca
cctggagacacgattatctctttagatttcagcagtaatgagtctgatgagcaacaattt
gatgacgttcctttgtataatgatgtaatgctcccctcatccagtgagaaattgcagaat
ataaatttggcaatgtccccactacctgcgtctgaaactacaaagccacttcgtagcaat
gctgaccctgcgctcaatagagaagttgtatcaaagctggagccaaatacggaaccactg
gaacttgcgttttccagccgccagaggcaagaacagccagccagtccttctgatgcaagc
accaaccaaagttcaccagaggcccacagtcccagtgactattgctttgatgtggataat
gatatggctaatgagtttaaactggaattggtggaaaaactctttgcaatagacacagaa
gcgaaaaatccattctccactcaggaaactgatttagagttggagatgttagcgccatac
atcccaatggatgatgacttccagttaagatcctttgatcagccaccttcactggagagt
ggttgtgctaactctcagagtgtcaccagtaccatttttcaccaaactcagacactgtct
cctgccactgaggaaataacaccagtgaaaacagagtgcatggatgacattaagactcta
attgtttctcagtctcctgtcctcataatcaatgaacccaacagcaccccagcatcacca
tatggtgggaatcgaagtcgaactgcatcgccaatcagggctggaaaaggaacattggac
cagacggagaaatcttatccaggaacacctaatttgttaacagtcactttcagtaacaga
tctgctccagtggatgaagagctaaatccaaagatgctagctttgcataattctcaaaga
aagagaaagatggaatatgatggctccctctttcaagcagtgggaattggatctttattc
cagcagtcaggtgactgtggaacgaatgcatcgctttgttggaaacgtgtaaaaggatgc
aaatctaatagccagaatggagtgggacaaaagacaatcatcttattatcaactgatata
gcaagtaagctcctagggcagtcaatggatgagacgggactaccgcaacttaccagttat
gattgcgaagtaaacgctcccatacaaggcagcagaaacctgctacagggtgaagaactg
ctcagagctctggatcaagttaactga
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