Carettochelys insculpta (pitted-shelled turtle): 142014386
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Entry
142014386 CDS
T11194
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142014386 (NPAS3)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
142014386 (NPAS3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
142014386
NCBI-ProteinID:
XP_074852965
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Position
6:complement(48065339..48935619)
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AA seq
925 aa
AA seq
DB search
MAPTKPSFQQDPSRRERITVQHPLPNQSECRKIYRYDGIYCESTYQNLQALRKEKSRDAA
RSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEG
PPPNTSVKGIQMWKSEVCMRKTPCEVIGAQRRRSPSALAIEVFESHLGSHILQSLDGFVF
ALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQ
GTAEDGASSASSSSQSETPEPVESTSPSLLTTDNTLERSFFIRMKSTLTKRGVHIKSSGY
KVIHITGRLRLRVSLSHGRTVPSQIMGLVVVAHALPPPTINEVRIDCHMFVTRVNMDLNI
IYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYRWMQKNG
GYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKDTPMDIAQLPHLPEKTSESSETSD
SESDSKDNSEDNENSKSDEKGNQSENSEDPESDRKKSGNQSDNEMNCNDDGNSSSNQDSR
DSDDSFENSDFENQKAPEDSFGTLGSMQIKVERYVESESDLRLQNCESLTSDSAKDSDST
GEVNAQSSSKHQKRKKRRKKQKGGSMTRRRLSSTSSPNGLDSALVDQPQLLSSPNSASVL
KIKTEISEPINFDNDSSIWNYPPNREISRNESPYSMTKPPSSEHFPSPQASSSLHVSIPD
SVLTPPGSENTASRKTQFSTSSSSALAPVSSDPLSPPLSASPRDKHPGGPSTSNSLLYTG
DLEALQRLQAGNVVLPLVHRVTGTLAATSTAAQRVYTTGTIRYAPAEVTLAMQGNLLPNT
HAVNFVDVNSPSFGLDPKTPMEMLYHHVHRLNMSGPFGSAVSGASLTQMPAGNVFTTAEG
LFSTLPFPVYSNGIHTTQTLERKED
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaccaagcccagctttcagcaggatccttccaggcgagaacgaataactgtc
cagcatcctctgcccaaccaatcagaatgtaggaaaatctacagatatgacggaatctac
tgtgaatctacctaccagaatttacaagccttgcgaaaggaaaagtcccgagatgctgct
cgctctcgccggggaaaggaaaattttgaattctacgagttggcaaagttattgccgctc
cctgcagccattacaagtcagcttgataaggcatccatcattcgacttacaattagctat
ctgaaaatgagggactttgctaatcagggggatcctccatggaacttgaggatggaagga
cctccgccaaacacatcagtaaaagggatacaaatgtggaaatctgaggtctgcatgaga
aagacaccatgtgaagttataggtgctcagcgcaggagaagccccagtgcacttgccatt
gaagtatttgaatcacatttgggaagtcacattttacagtccctggatggatttgtattt
gcactaaaccaagaaggaaaatttttgtacatttcagaaaccgtctccatctatttaggc
ctatcccaagtggaactgacaggcagcagtgtgtttgactatgtccaccccggagaccat
gtggagatggcagagcagctgggcatgaagcttcccccaggacgaggccttctctcgcag
ggtacagcagaggatggagccagctcagcatcttcatcttctcagtctgagacccctgag
ccagtggaatcaacaagccccagtctactaaccactgacaacaccctagagcgctctttt
ttcattcgaatgaaatctacactgaccaagcgaggagtgcacatcaaatcatcagggtac
aaggtgatccatataacaggccggttacgactgagagtgtcattgtcccatgggaggaca
gtccctagccaaatcatggggcttgtagttgtggctcacgctttgcctcctcctacaatc
aatgaagtcagaatcgactgccacatgtttgttactcgcgtaaatatggacctcaatatc
atttactgtgaaaataggattagtgattacatggatctgacccctgtagatattgtaggg
aaaagatgttaccacttcattcatgctgaagatgtggaagggatcaggcatagtcactta
gacttgctgaataagggtcagtgtgtaactaaatattaccgctggatgcagaagaatgga
gggtacatctggatacagtccagcgctaccatagctatcaatgccaagaatgcaaatgag
aagaatatcatctgggtcaattaccttctgagtaacccagaatacaaggacacaccgatg
gatattgcacaacttcctcatctgccagagaaaacctcagaatcctcagagacttccgat
tctgaatcagactcaaaggacaactcggaggacaatgagaactccaagtcagatgagaaa
ggaaaccaatcagaaaacagcgaagaccctgaatctgataggaagaagtctgggaaccag
tcagataatgaaatgaactgtaatgatgatgggaacagctccagcaaccaggacagcagg
gatagtgatgacagctttgaaaattctgactttgagaatcagaaggcccctgaggacagt
tttggtactcttggttctatgcagatcaaggtggagcgctatgtggagagtgaatcagac
ttgcggttgcagaactgtgaatcgttgacgtcagacagtgccaaggactcagacagcaca
ggggaagtaaatgcccagtcttccagcaaacatcaaaagaggaaaaagaggaggaaaaag
cagaaaggaggcagcatgacccgcagaaggctatcaagcacttcaagcccaaatggactt
gactcagcattggtggaccagccccagctgctctcgtcaccaaacagtgcctcagtgctc
aaaattaaaacagagatctcagaacctatcaattttgataacgatagcagtatttggaat
taccctcctaaccgggaaatctcaaggaatgaatcgccctacagtatgaccaagccccca
agctcagagcacttcccctcaccacaagccagcagtagtttacatgtctccattccagac
tctgttctcaccccaccagggtctgaaaatactgccagccgcaaaactcagttcagcacc
tcatccagctcggccttggctcctgtatcctccgaccctttgtcacccccactttcagca
tctccacgggacaaacatccaggaggtccaagcacttccaactctttgttgtacactggg
gatctggaagcccttcagaggttgcaagcaggcaatgtggtccttcctttggttcacagg
gtaactggaacccttgctgccaccagcactgctgctcagagggtctacaccactggcact
attcggtatgctccagctgaagttactttagccatgcagggcaatctcctccctaatacc
catgctgttaattttgttgatgttaacagccccagctttgggctggatcctaaaacaccg
atggaaatgctctaccaccacgttcaccgactcaatatgtcaggaccattcggaagtgct
gtgagcggggccagtctgacccaaatgcctgcagggaacgtgttcacaactgccgaagga
cttttttccactcttccatttcctgtgtacagcaatggaattcacactacacagactctg
gaacggaaagaggattga
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