Carettochelys insculpta (pitted-shelled turtle): 142014673
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Entry
142014673 CDS
T11194
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142014673 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142014673 (CSTF3)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
142014673 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
PRP6_TPR
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
142014673
NCBI-ProteinID:
XP_074853729
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Position
6:93414219..93505305
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AA seq
718 aa
AA seq
DB search
MSGEGAAGDQAAEYVPEKVKKAEKKLEDNPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLYIEAEVKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKV
HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLATIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEIFQRCKLPETVDEAVRLI
TGGLPDLNVEGNGPVENNTLFTKAVKRPNEDSDDEEEKGSVVPPVHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagagggagccgctggcgaccaggctgctgaatatgtgccagaaaaagtgaag
aaggctgaaaagaaattagaagacaatccatatgaccttgacgcttggagcattctcatt
cgagaggcacagaatcagcctatagacaaagcacggaagacctatgaacgccttgttgcc
cagttccccagttctggcagattctggaaactgtacattgaagcagaggttaaagcaaaa
aattatgacaaagtagaaaagttgtttcagagatgccttatgaaggtgctacacatcgat
ttatggaagtgttacctttcgtatgtacgtgaaaccaagggcaagttacccagttacaaa
gaaaaaatggctcaggcatatgactttgctctggataaaatcggcatggaaatcatgtca
taccagatctgggtggattacatcaattttttgaaaggcgtagaggcggttggatcttat
gcggaaaaccagaggataacggctgttcgtagggtttatcagcgaggttgtgtgaaccca
atgatcaacattgaacaactttggagggattataacaaatatgaagagggaatcaatatc
cacttagctaaaaaaatgattgaagatcggagtagagattatatgaatgctagacgtgtg
gccaaggaatatgagactgttatgaaaggtctggatcgcaatgctccctccgtccccccg
cagaatactccgcaagaggctcagcaggtcgacatgtggaaaaaatatattcaatgggaa
aagagtaatccactgcgcacagaagaccaaactctcataacaaaaagagttatgtttgct
tatgagcagtgtctcttggtcctggggcatcatccagatatctggtacgaagctgcacag
tatcttgagcaatccagcaagctgctagctgagaaaggggacatgaacaatgctaaactg
ttcagtgatgaggctgctaatatttatgaaagagcaatcagcactttactaaagaagaat
atgcttctgtactttgcatatgcagactacgaagagagtcgaatgaagtatgagaaggtg
cacagcatatataaccggctcttggctattgaagatattgatcccactttggtatatata
cagtatatgaaatttgcaagacgggctgaaggcatcaaatctggaagaatgatatttaag
aaagcgagagaggatgcacggacccgccatcatgtctatgtcacagcagctttgatggag
tattactgtagtaaggacaaatcagttgccttcaagatttttgagttagggctgaagaaa
tatggagacattccagaatatgtattagcatacattgactatctatcccatcttaacgaa
gacaataatacaagggttttatttgaacgtgttttaacctctggaagtctcccacctgag
aaatctggagaaatttgggcccggtttttagcttttgagagtaacattggtgatttagct
agtatacttaaagtggaaaaacggaggtttacagccttcaaagaagaatacgagggtaaa
gagacagctctgctggtagataggtacaagttcatggatttgtacccttgttctgcaagt
gaacttaaagctcttggttacaaggatgtctcacgtgccaagttagcaaccataattcca
gaccctgtggtggctccttctatagtgcctgttctaaaagatgaagtggacagaaaacct
gaataccccaaaccagacacacagcaaatgattccatttcagccacgacatttagcacct
ccaggtttgcatcctgtgccaggtggtgtatttccagtcccaccagctgctgtagtttta
atgaagctcctcccacctcctgtttgttttcagggtccttttgtccaagtggatgaactc
atggagatttttcaaagatgcaaacttccagagactgttgatgaagctgtaagactaatt
actggaggtctgcctgacttaaatgtagaaggcaatggacctgtagaaaataataccttg
tttactaaagctgtcaagagaccaaatgaagactctgacgatgaagaggagaagggctca
gtggttcctcctgtacatgacatatacagagcacgacagcaaaagagaatccgatga
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