Carettochelys insculpta (pitted-shelled turtle): 142014706
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Entry
142014706 CDS
T11194
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
142014706 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ciz04515
]
142014706 (ROBO1)
Cell adhesion molecules [BR:
ciz04515
]
Immunoglobulin superfamily
ROBO family
142014706 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
142014706
NCBI-ProteinID:
XP_074853804
LinkDB
All DBs
Position
1:complement(196016508..197134524)
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AA seq
1653 aa
AA seq
DB search
MKWEHYPFFVIVAVFSLSRSHQLLGQLIPDSDDLERGSDSGTPLPTSDNDDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVM
VAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKNDAGKYVC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVEDSAEFRCEARGDPVPTVKWRKDDG
ELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQ
VAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITGVQR
SDVGYYICQTLNVAGSITTKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLILSCVATG
TLMPTVLWRKDGVLISTQDSRIKQLETGALQIRYAKLGDTGRYTCIASTPSGEATWSAYI
EVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFS
HASGSSWQTVAENVKTESFAIKGLKPNAIYLFLVRAANAYGLSDPSQISDPVKTQDVPPT
SQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPTTASHSE
SEWLIFEVRTPTKNSVVIPELKKGVNYEIKARPFFNEFQGADSEVKFAKTLEEAPSAPPQ
SVSVTKNDGNGTAIVVTWQPPPEDTQNGMVQEYKVWCLGNESRYHINRTVDGSTFSVVIP
SLVPGVRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSSEDQVSLAQQISDVVKQPAFI
AGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGG
RPGLLNISEPAPQPWLADTWPNTGNNHNDCSINCCTSGNGNSDSNLTTYSRPADCIANYN
NQLDSKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNQPGQPTPYATTQLIQ
SSISNNVNSSSGDTNEKHWKPSVQQKQEVAPIQYNIMEQNKLNKDCRVSDSNAPTIPYNQ
SYDQNTGGSYNSSDRGSSTSGSQGHKKGTRTPKVPKQAGMNWADLLPPPPAHPPPHSNSE
DYSLSVDESYDQEIPCPVPPARMYLQQDELEEEDDDERGPTPPVRGAASSPAAVSYSHQS
TATLTPSPQEELQPMLQDCQEEIGHIQHPPDRRRQPVSPPPPPRPISPPHTYGYISGPLV
SDMDTDAPEEEEDEADIEVAKMQNRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASE
EDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGGRRHFHASHCP
RPTSPVSTDSNMSAVVIQKVRPAKKQKHQPGHLRREVYTDDLPPPPVPPPAIKSPTSQSK
AQLEVRPVMLPKLMSIEPRTDRSAERKGASYKGREGADSRQHSDVRTNSGERRELQEQQN
DGKLRGNKGAKREGTPAKTHLLQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGGRQRA
DQSNIGRRNAAEMQVLGAYEQGEEEEELEETES
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgggaacattatcctttttttgtcattgtagctgtattcagcctgtccaggtcc
catcagttactgggtcagcttattccagactctgatgacctagagagggggagcgacagc
ggaacaccacttcccacctctgataatgacgacaattcgctgggctacacagggtcccgt
ctccgtcaagaagatttcccaccacgtattgttgagcatccttctgatctgatagtttca
aaaggagaaccagcaactttgaactgtaaagctgaaggcaggccaaccccaactattgaa
tggtataaagggggtgaaagagttgaaactgacaaagatgaccctcgctcccatcggatg
ttgctgcccagcggatctttatttttcttacgcatcgtacacggacgtaaaagtagacca
gatgaaggagtctatgtttgtgttgcgaggaattaccttggggaagctgtgagtcataat
gcatccttggaggtagcaatactacgagatgacttcagacagaacccttcagatgtaatg
gtagctgtgggtgaacctgccgtgatggaatgccaacctccaagaggccatccagaaccc
acgatctcatggaaaaaagatggatctcccctggatgacaaagatgaacgaattacaatc
agaggagggaagctcatgattacctacaccagaaagaatgatgctggcaagtacgtctgt
gttggaacaaatatggtgggagaacgagagagtgaagtggcagagctcactgttttagaa
agaccatcttttgtgaagagacccagtaatttggccgtaactgtggaagatagtgcagag
tttagatgtgaagctcgaggtgaccctgtacccacagtaaaatggcgaaaagatgatggg
gaattgccaaaatcaagatacgaaatccgtgatgaccacaccttgaaaatccggaaagtt
atggcaggagacatggggtcttatacttgtgttgctgaaaatatggttggaaaagctgaa
gcatcagcaactctaacagttcaagagcctccccattttgttgtgaaacctcgtgaccag
gtagcagcattgggccggacagtgactttccagtgtgaagcaactgggaaccctcaacca
gccatcttttggaggagggagggaagtcagaatctgcttttctcataccagccacctcag
tcatccagccgtttttcagtttcccagactggtgacctcacaatcacaggtgtccagagg
tccgacgttggatactatatctgccagactttaaatgttgcaggaagtatcacgacaaaa
gcatacttggaggttactgatgtgattgcagaccggcctcccccagtcattcgacaaggt
cctgtaaatcagactgtagctgtggatggtacattaatactcagctgtgtggccactggc
actctaatgcccacagtcctctggagaaaagatggggtcctcatctctacccaggactca
cgcatcaagcagctggagacaggagccttacagatccgatatgcaaagctgggtgacact
ggccggtacacctgcattgcctcaactccaagtggtgaagctacgtggagtgcttatatt
gaggtccaagaatttggagttccagtgcaaccaccaagaccaacagacccaaacttgatt
cctagtgcaccatcaaaacctgaggttacagatgtcagcagaaatacagtaacactgtca
tggcaacctaatttgaattcaggtgcaacaccaacatcttatataatagaagccttcagc
catgcatctggtagcagttggcaaactgtagcagaaaatgtgaaaactgaaagctttgcg
attaaaggtctgaaacctaatgcaatttacctcttccttgtgagagcagctaatgcatat
ggacttagcgatcctagccagatatctgacccagtgaaaactcaagatgttccccctaca
agccagggtgtggatcacaaacaggtccagagagagcttggggatgtggttctgcatctt
cacaacccaactatcctttcttcttcctcaattgaagttcattggacagtggaccagcaa
tcgcagtatattcagggatataaaattctgtacaggccaacaactgcgtcccacagcgaa
tctgaatggttaatttttgaagtgagaacaccgaccaaaaatagcgttgtcattccagag
ctcaagaaaggtgtaaactatgaaatcaaggctcgccctttttttaacgagtttcaagga
gcagacagcgaagtgaaatttgccaaaaccctagaagaagctcctagtgctccacctcag
agtgtttcagtgactaagaatgatgggaatgggactgcaattgttgttacctggcagcca
ccccctgaggatacccagaatggaatggtccaagagtataaggtttggtgcctcggcaat
gaaagtagataccacataaacaggacagtggatggttccaccttttctgtagtcatcccc
tccttagtccctggtgttcgatacagtgtggaagtagcagcaagtactggtgcaggacct
ggtgtgaaaagtgagccacagtttatccaattagattcccatggaaaccctgtgtcctca
gaagaccaagtcagcttagcccagcagatttcagatgttgtaaagcagccagctttcatt
gctggcattggtgcagcctgttggattattcttatggtcttcagcatctggttataccgc
caccgaaagaagagaaatggactcacgagcacttatgctggtatcagaaaagtcccgtct
tttaccttcacaccaacagtgacctatcagagaggaggagaagctgtaagcagtggaggc
agaccaggtcttctaaacatcagtgagcctgcccctcaaccatggctagcagatacatgg
cccaacactgggaacaaccataacgactgctccatcaactgctgcacctcgggcaatgga
aacagtgatagcaacctcacaacttacagtcgaccagctgattgcatagcaaattacaac
aaccagctggacagcaagcaaacaaacctgatgctgcctgagtcaactgtttatggtgat
gtggatctgagcaacaaaatcaatgagatgaaaaccttcaatagcccaaatctaaaggat
ggaagatttgtgaaccaacctgggcagccaacgccttatgcaaccactcagctcatccag
tcaagcatcagcaataatgttaacagcagcagtggggatacaaatgagaaacactggaaa
ccctctgttcagcaaaaacaagaggttgcacccatacagtacaacattatggagcaaaac
aaattaaacaaagattgcagagtaagtgacagtaatgctccaactataccatacaaccag
tcatatgaccagaatacaggagggtcgtataatagttcagatcggggcagtagtacttct
gggagtcaaggacacaaaaagggtacccgtacccctaaagtacccaaacaggctggcatg
aattgggcagatctacttccaccacccccagcacacccacctcctcacagcaacagtgaa
gattatagtctttctgtggatgaaagttatgaccaagaaattccatgcccagtgccgcct
gcaaggatgtatctacagcaggatgaactagaggaagaagatgatgatgagagaggtccc
actcctccagttcgaggagcagcttcctctcctgcagctgtttcctacagccatcagtct
actgccaccctcacaccttcaccccaagaagaactgcagcccatgttacaggattgtcaa
gaagaaataggccacattcaacacccgcctgaccgcagacgtcaacctgtgagccctcca
ccccctccaagacctatctctccaccacacacctatggttacatttcaggacccctcgtc
tcagatatggatactgatgcaccagaagaggaagaggatgaggcagacatagaagttgcc
aagatgcagaacagaaggctacttttgcgtggccttgagcaaacacctgcctcaagcgtt
ggggatttggaaagttctgtaacagggtccatgattaatggctggggctcggcctcagaa
gaagacaacatctcaagtggacgatccagtgttagctcttctgatggctcattttttact
gatgcagattttgcacaggctgttgcagcagcagcagaatatgctggtcttaaagtagca
agacgtcaaatgcaagatgctgcaggaggccgtagacattttcatgcatctcactgccct
agacccaccagccctgtgtctactgacagcaacatgagtgctgttgtaatacaaaaggtc
cgacctgccaaaaagcaaaagcaccagccaggacatctgcgcagagaagtctacacagat
gaccttccaccccctccagtgccacctcctgctattaaatctcctacctcccagtccaag
gcacagctggaggtacggccggtcatgttgccaaaactcatgtcaatagaaccaagaaca
gacaggtccgcggaaagaaaaggagcaagctacaaagggagggagggggcagatagcaga
cagcattctgacgtgcggacgaattcaggagagcgcagagaattacaggagcagcaaaat
gatgggaagctgcgaggaaacaaaggagcaaagcgagaaggcacaccagcaaaaactcat
cttctccaagaggacatcttgccatactgcaggcctacgttcccaacatcaaataatcca
agagatccaagttcctccagctccatgtcatcaagaggatcaggaggtagacaaagggca
gatcagtcaaacataggccgaaggaatgctgcagaaatgcaagtgctgggagcatatgaa
caaggagaagaagaagaagaattagaggaaactgaaagctga
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integrated database retrieval system
