Carettochelys insculpta (pitted-shelled turtle): 142014734
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Entry
142014734 CDS
T11194
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03022
Basal transcription factors
ciz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142014734 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
142014734 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ciz03021
]
142014734 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
ciz03400
]
142014734 (GTF2H1)
Transcription machinery [BR:
ciz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
142014734 (GTF2H1)
DNA repair and recombination proteins [BR:
ciz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
142014734 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
142014734
NCBI-ProteinID:
XP_074853875
LinkDB
All DBs
Position
6:107115820..107156805
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTVSHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEDFWANRLSLNTVDNSVAPNKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHSMTEKEFWTRFFQSHYFHRDRLNTGSKD
LFAECAKMDEKGLKTMVSQGVKNPLLDLTALEDKSLDEGYGVSSVPSTSNSSKSLKESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYNEISSMDGNSRDSDFFQPPIKKVKLQEAIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFQSIRQEMEAYVPRLTQ
VLSSGAATSTITALSPGGALMQGGTQQAINQMVPNDVQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLINHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcatctgaggaagtgttactgatagtaaagaaggtgcggcaaaaaaaacag
gatggggctctctatcttatggctgaaaggatagcatgggcacctgaaggcaaagaccga
tttacagtcagtcacatgtatgcagatatcaaatgccagaaaatcagtcccgaaggaaag
gctaaaattcagttacagctggtactgcatgcaggggacacaaccaacttccacttctcc
aatgaaagcacagcagtgaaagagcgagatgcagtgaaggaccttcttcaacagctgtta
cccaaattcaagaggaaagcaaataaagaactagaggaaaagaacagaatgctgcaagaa
gacccagttttatttcagctttacaaagatctcgttgtgagccaagtaatcagtgctgaa
gacttctgggccaaccgtttaagcttgaacactgtcgataattctgtggcaccaaataag
caggatgtgggcatctctgcagcttttctggctgatgttcggcctcaaacagatggctgc
aatggcctgaggtataacttgacttcggatattattgaatccatattcaggacataccca
gcagtaaaaatgaagtatgcagaaaatgttccacatagtatgacagaaaaagaattctgg
acacgattcttccagtctcactacttccatcgagataggctgaatacaggttcaaaagac
ctctttgctgaatgtgctaaaatggatgaaaaagggttaaaaacaatggtgtctcaaggg
gtgaaaaatcctctactagatctaacagccttggaggataaatcattagatgagggttat
ggtgtttcctctgtgccatccacatcaaactcctccaagtccttaaaggagagtagcaat
gctgctattataaaacgctttaatcatcacagtgccatggtccttgcagctggcctcaga
aaacaagaagcacaaaatgatcactacaatgagatcagcagtatggatggaaactccagg
gattcagatttctttcagcctccaataaaaaaggtgaagttacaggaggctattgaatat
gaagatttaggaaagaataatagcattaaaactattgcactaaacctaaagaaatctgat
cggtattatcatggtccaactccaattcagtcacagcaatatgcaaccagtcaggatatt
attaattcttttcagagtattagacaagaaatggaggcctatgttcccagactaactcag
gttctttccagtggtgctgctactagcaccatcacagccctgtcacctggaggagcactt
atgcagggtgggacacagcaagccataaaccagatggtgccaaatgatgttcagtctgaa
ctgaaacacttgtatgtagcagttggagaactactgcgacacttctggtcctgctttcct
gttaatacaccattcctagaagaaaaggttgtgaaaatgaagagtaacttggaaagattc
caagttacaaagctctgtccattccaagaaaaaattcggagacagtatttaagcacaaat
ttgataaatcatatagaagagatgctgcagacagcctacaataaattccacacatggcag
tcccgacgtatgctgaagaaaacgtga
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