Carettochelys insculpta (pitted-shelled turtle): 142014782
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Entry
142014782 CDS
T11194
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04620
Toll-like receptor signaling pathway
ciz04621
NOD-like receptor signaling pathway
ciz04622
RIG-I-like receptor signaling pathway
ciz04623
Cytosolic DNA-sensing pathway
ciz05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
142014782 (IRF7)
04621 NOD-like receptor signaling pathway
142014782 (IRF7)
04622 RIG-I-like receptor signaling pathway
142014782 (IRF7)
04623 Cytosolic DNA-sensing pathway
142014782 (IRF7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
142014782 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142014782 (IRF7)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
142014782 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
TPR_NUP120_160
Motif
Other DBs
NCBI-GeneID:
142014782
NCBI-ProteinID:
XP_074853982
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Position
6:114250084..114274699
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AA seq
633 aa
AA seq
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MAAPESGGGSQKLRFACWLIKQINSENYEGLCWLNKAHNEFRISWKHTSRKDITTNDYKI
FKAWAIASGKYNEKLKDPAKWKTNFRCALRSTNMFLLVQDNSKASEDPHKVYQIVSQSPS
TVAAANSPTDNLRDNKDSISPHSEEASPLHHLTLPRQQLQQQIELGLEILSLENPPQEMD
SVQDERPPYHPGPNEPNGYTTNNAAPNGYQCNSDTLQWVVQQCSLIQNGCRQPLLSWAVD
GGLGHSSEEVAYEDSQAFPNHHISQNGYTLEGNGAANGPAENYHQSIGQWVTQTMAETQP
MQNGYDSSAASLLQQSPRHSTVSGISQLLNNTAQVLFERQPHYNNHVGLQSSFLAEAPAG
NAVLCQAPSGPGENPYHQPANQWAAPTAVEQNGLTHPAAPLPEQPIPSHSSGPLRNNAEA
IPPNMDVTIYYRGRPLHQVQVASSSCLFTYNEDDPGIALGCTQVIRFPSPDELPDHRQVH
FTNHVLQTTGLLLEQKHKKIYAKRLNKSKVFWAFSRQLANLPHNPEPKLLPRGTETELFD
YEAFSNELKAFREHQRASSPDFTIYLCFGQHFSKPKEDLLILVKLVPKFCEYCHDLVLRE
GASSLNSMNVSLQVSSSFNSLYDLIEQYNMQVD
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccagagagtggggggggctctcaaaaactacgctttgcctgctggttgatt
aagcagatcaacagtgaaaactatgaggggctctgctggctcaacaaggcccacaatgag
ttccgcatctcctggaaacatacttccaggaaggatatcacaactaatgactacaagatt
ttcaaggcctgggccatagccagtggcaagtacaacgaaaagctgaaagatccagccaag
tggaagaccaacttccgttgtgccctgagaagcacaaacatgttcctgttggttcaggat
aactcaaaagcctccgaggacccccacaaagtgtatcaaattgtcagccaaagccccagt
actgtggcagctgctaactccccaacagacaatctgcgtgacaacaaagatagcatcagc
ccacattctgaagaggcctctcctctacaccaccttacactaccacgacagcagctgcag
cagcagatagaattaggtttggagattttgtcactggaaaaccctccacaagagatggac
agcgtgcaggacgagaggcctccctaccaccctggcccgaatgagcccaatggctacacc
accaataacgctgcaccaaacggctaccagtgcaactctgacacactccagtgggttgtg
caacagtgcagcctaatccaaaatggctgcaggcagccactgctgtcatgggcagtggat
ggaggtttaggtcacagttcagaagaagtcgcatatgaagacagtcaggcctttccaaac
catcacattagccaaaatggatacaccctggaagggaatggagcagcaaatggaccagca
gagaactatcaccaatccattggccagtgggtgacccaaaccatggcagagacccaaccc
atgcagaatggttatgactcgtctgctgcctcacttctacagcagtccccccgacacagc
acagtttctggcataagtcagctgcttaataatacagcgcaagtcctgtttgagaggcaa
cctcattacaataaccacgtgggccttcaaagttctttcctggccgaagcccctgcaggg
aacgcagtgctctgtcaagcgcccagtggcccaggagagaatccctatcaccagccagca
aaccagtgggcagcccccacagcggtggagcagaatgggctcacccatcccgctgcccct
ctgccagagcagccgattccgtctcacagctcaggccctttgcgcaacaatgcagaagcc
atccctcccaatatggatgtcaccatctattaccgagggcgaccgctccaccaggtgcag
gtggccagcagcagctgcctgttcacgtacaatgaagacgaccctggaatcgccctgggc
tgcacacaggtgatccgcttcccgagccccgatgaactgccggaccacaggcaggtccac
ttcaccaaccatgtgctccagaccacagggctgctgctggaacagaagcataagaagatc
tatgccaagcgcctgaataaaagcaaagtcttctgggccttctccaggcaattagcaaac
ctgcctcacaaccctgaacccaagctgctgccgcgcggcacagaaactgagctcttcgac
tacgaggcgttctccaatgagctgaaggctttcagggaacatcaaagagcttcatctccc
gacttcaccatctacctttgctttgggcagcacttctccaaacccaaggaggacctgtta
atcctggtgaagctggtgcccaagttctgcgagtattgccacgacctggtgctgagggag
ggtgcctcatccctgaacagcatgaatgtgagtctccaggtgtccagctccttcaacagc
ttgtatgaccttatagagcagtacaacatgcaggtcgactga
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