KEGG   Carettochelys insculpta (pitted-shelled turtle): 142015024
Entry
142015024         CDS       T11194                                 
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin-2
Organism
ciz  Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:ciz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ciz03019]
    142015024 (ATXN2L)
Messenger RNA biogenesis [BR:ciz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     142015024 (ATXN2L)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 DUF5415
Other DBs
NCBI-GeneID: 142015024
NCBI-ProteinID: XP_074854478
LinkDB
Position
6:126654382..126672078
AA seq 1025 aa
MLKQPQPQPPPGGPGPQAGPPPARKAPQPGAAPSPNGSLSPGGGAGRAAAPAGGGGGSSS
SGGGAPGGVGGGGTRGQSTGKGPPQSPVFEGVYNNSRMLHFLTAVVGSTCDVKVKNGNTF
EGIFKTLSSKFELAVDAVHRKTQDQLVGPKREDIVDTMVFKPTDVMLVHFRNVDFNYATK
DKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDYDLESDMSNGWDPNEMFKFNEENYG
VKTTYDSSLSSYTVPLEKDNSEEYRQREARAAQLAREIESSPQYRLRIAMENDDGRTEEE
KHSSVQRQVSGRDSPSLASRENKYVPLPQRVREGSRGGVRCSSSRGGRPGVGSLPSRGST
HHSDSNSSPVPEQRGINGGPSRMSPKSQRSIRGAKAMSSPSGRPVEVSAAPPAVGRMYPP
RSPKSASAIPVSSQDAPVGSAVPGAPASPSESRTGLESSISPNPTSPKVAASAPATAVEG
KEVPTSVAKDPGRTLEVMGPCELNKAASKAGLQSEQKRTQLEELRKFGAQFKLQPSGSSE
ASLESFSARPKEPLEGKDKALEPGICEGSEETPTMNTVPKPSGTSLELLPESGKDEKGLC
EGTEQQMASPSGKGEPEDKEEGPVSEQVKKSTLNPNAKEFNPSKTLLSVNKSTSTPTSPG
PRAHSTPSIPVITAGQTGMYSPQYISYIPQIHMSPAVQAPQMYPYPVSSSVPGQQGKYRG
AKGSLPPQRSDQHQPTSAPPIMQAAAAAGPPLVAAAPYSSYISYNPQQFTGQPTMMQPMA
HYPSQPVFAPMLQSNPRMMTSGSHPPAIVSTSTPQFPPSEQPTPQTLYATVHQSYPHHAT
QLHPHQPQPATTPTGNQQQTQHAAPSPVQHQAGQPPHLANAQQQQNLYHAATLTATPPSI
TPGPSAQSPQNSFPQQAVYAIHAHQQLQHSYTNMAHVTQAHVQTGITAAPPPHPGAPHPP
QVMLLHPSQTHGGPPQGGVPQSGVPTLSASTPSPYTYIGHHQVSPIPAAPIPPPWKLKPR
FLTVN
NT seq 3078 nt   +upstreamnt  +downstreamnt
atgttgaagcaaccgcagccgcagcccccaccgggcggcccggggccccaggccgggccg
cctcccgcccgcaaggctccgcagccgggggcagcccccagccccaacggcagcctcagt
cccggcggcggggcggggcgggctgcggccccagccgggggaggcggcggcagcagcagc
agcggcggcggcgctcccggaggagtcggtggcggcggcaccagggggcagagcacaggg
aaggggcctcctcagtctccagtattcgaaggtgtctataacaattcccgaatgttacat
ttcctgacggctgttgtggggtccacatgtgatgtgaaggtgaaaaatggaaacaccttt
gaggggatttttaaaactctcagctctaagttcgagctggctgtggatgcggtgcacagg
aagacccaggatcagttagtgggacctaaacgggaggacattgtggacaccatggtcttc
aagcccactgatgtcatgctggtgcatttccgcaatgtagatttcaattacgccacaaaa
gacaagttcacggactcggccattgccatgaattcaaaggtgaatggggagcataaagag
aaggtgctgcagcgctgggaagggggtgacagcaacagtgatgactatgacctggagtct
gacatgtctaatggctgggaccctaatgaaatgttcaagtttaatgaagaaaactatggt
gtgaaaacaacttatgacagcagtttgtcatcctacaccgtccctctggagaaagataac
tcggaggagtaccggcagcgggaggcccgggcagcccagctggcccgggagattgagtcg
agcccccagtaccgcctgcgcatcgccatggagaatgatgatggacgaacggaggaggag
aagcacagctctgtgcagaggcaggtgtctggcagggacagccccagcttggcctccagg
gagaacaagtatgtcccactgccacaacgtgtcagagagggctcgcgaggtggtgtccga
tgcagcagctcccggggtgggagaccgggagtggggtccctgccttcccgtggcagcaca
caccattcagacagtaactctagcccggtaccagagcagcgagggatcaatggagggccc
tcccgaatgtctccaaagtcccagcgttccatccggggtgccaaggccatgtcttcccca
tcaggtcgcccagtggaggtttcagcagctcctcctgcagtgggccgcatgtatcctcct
cgctctcctaagtctgcctcagccattcctgtctcttcccaagatgctccagttggatct
gctgtgccaggagcacctgcatcaccatcagagtccagaactggcctggaatcaagtatt
tccccaaaccccacttctcccaaagtagcagcctctgcaccagccactgctgtggagggg
aaagaggttcccacatctgtggctaaagatcctggcagaaccttggaagtgatggggccg
tgtgagctcaacaaggcagccagcaaagcaggtcttcagagtgagcagaagcgaacccag
ttggaggagctgcgcaagtttggggcccagttcaagctccagccgagtggctcatcagag
gctagcctggaatccttcagtgccaggcccaaggagcctctggagggcaaggacaaggcc
cttgagccaggtatctgtgaggggtctgaggagacgcccaccatgaacacagtgccaaag
cccagtgggaccagcctggagctgctgccagagagtggcaaagatgagaaggggctttgt
gagggaactgagcagcagatggccagcccctcaggcaagggtgagccggaggacaaagag
gaggggcctgtgtctgagcaggtgaagaaatcgactctgaatcccaacgccaaggaattc
aacccctcaaaaacgctgctgtcggtgaacaagtcaacaagcacccctacgtcaccaggc
cctcgtgcccattccactccctccatcccggtgatcacggccggccagactggcatgtac
agcccgcagtacatctcctacatacctcagatccacatgagccctgcagtccaggcgcct
cagatgtacccttatcctgtctccagctctgtgccaggccagcagggcaagtaccgaggg
gccaaaggttccctcccaccccagcgttctgaccagcatcagccaacatctgctcccccc
attatgcaggcagcggcagcagctgggccccctctagtagcagctgccccctactcctcc
tacatttcctataacccccagcagttcactgggcagcccaccatgatgcagcccatggct
cactacccttctcagcctgtgtttgccccgatgctgcagagcaaccctcgcatgatgaca
tctggtagtcaccccccagccattgtgtcgacatccacgccccagtttcccccttcggag
cagcccacaccccagacgctctatgctacagttcaccagtcctacccccaccatgcaaca
cagctgcaccctcaccagccccagccagccaccactccaacagggaatcaacagcagacc
cagcatgctgcccctagtcctgtacagcaccaagctgggcagccgcctcacctagccaat
gcccagcagcagcagaacctgtaccatgcagccacgctgacagccacgccaccctccatc
acaccggggcccagcgctcagtccccccagaacagcttcccacagcaggctgtctatgcc
atccatgcccaccagcagctgcagcacagctacaccaacatggcccatgtcactcaggcc
catgtccagactggaataacagcagcaccgcctccccatccaggagcacctcaccctccc
caggtcatgctgctccacccctcgcagacccatggggggcccccccaaggtggtgtgcca
cagagtggggtgcccaccctctcagcctccacaccatctccatatacctatataggacac
catcaagtctcacccatcccagcagctcccattccacccccctggaaactgaagcctcga
ttcctgactgtgaactga

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