Carettochelys insculpta (pitted-shelled turtle): 142015553
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Entry
142015553 CDS
T11194
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ciz03016
]
142015553 (TRUB1)
Enzymes [BR:
ciz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
142015553 (TRUB1)
Transfer RNA biogenesis [BR:
ciz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
142015553 (TRUB1)
Prokaryotic type
142015553 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
142015553
NCBI-ProteinID:
XP_074855182
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All DBs
Position
7:complement(62676346..62725073)
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AA seq
291 aa
AA seq
DB search
MAERMCGELGSVVAHSAAAAKLFSLSGLFAVYKPKGPTCASVLNQLKEKLLAEAGIQVCA
RKRKKQILKIGHGGTLDGAAAGILVVGIGKGTKMLSNLLSGSKRYTAIGELGKATDTLDA
TGKVTEEKPYDQITKGDLERVLQKFVGNIMQVPPLYSALKRDGQSLSSLMKKGKAVEPNP
ARPVTVYSLSLQNFQPPLFTLDVECGGGFYVRSLVSDIGKELSSCASVKELTRTKHGPFT
LEEHALHEDKWTIDEIAQSLEHCMSLVAVEPSLKKLKTEHSEESTVNCEDK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcggatgtgcggggagttggggagcgtggtggcccatagcgccgccgctgcc
aaactgttctctctgagcgggctgttcgcggtgtacaagcccaaaggtcccacgtgcgcc
agtgtgctcaaccagctgaaggagaaactgctggcagaagctggtatacaagtgtgtgca
agaaaaaggaaaaaacagattttgaagattggacatggtggcactctagatggtgcagca
gcaggaattctggtggtcggcattggaaaaggaactaaaatgctgagcaaccttttgtca
ggctccaagaggtacacggccattggagaactgggaaaagctactgatacattagatgct
acaggaaaagtaactgaagaaaagccctatgatcagataacaaaaggagatcttgaacgt
gtgctgcaaaagttcgtggggaatataatgcaagttcctccactctattctgctctgaag
agagatggacaaagcctgtcatctctgatgaagaaaggaaaagctgtggaaccgaatcct
gcaaggccagttacggtgtacagcctctctctccaaaacttccagccaccactgttcacc
ctggatgttgaatgtggaggtggcttttatgtcagaagcctggttagtgacatcggaaaa
gaactctcttcctgtgccagcgtgaaagagttgacccgaaccaaacatggaccatttacg
ctagaggagcatgcacttcatgaagacaaatggacaattgatgaaattgcacagtccttg
gagcactgcatgtctcttgttgctgtagagccatctcttaaaaaattaaagactgagcat
tctgaagaatccactgtgaattgtgaagataagtga
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