Carettochelys insculpta (pitted-shelled turtle): 142015580
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Entry
142015580 CDS
T11194
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04110
Cell cycle
ciz04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
142015580 (SMC3)
04114 Oocyte meiosis
142015580 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ciz03036
]
142015580 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ciz00535
]
142015580 (SMC3)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
142015580 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
142015580 (SMC3)
Proteoglycans [BR:
ciz00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
142015580 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
142015580
NCBI-ProteinID:
XP_074855299
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All DBs
Position
7:complement(66536915..66594864)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELSELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLDDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKDLQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSAESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaacaggtcatcatccagggatttcgaagctacagagatcagactattgtc
gatcctttcagttcaaaacacaacgtcattgtgggaagaaatggatctgggaaaagtaac
tttttctatgcaattcagtttgtcctcagtgatgagtttagtcaccttcgtccagagcag
agactggctttgttgcatgaaggcacaggtcctcgtgttatttcagcatttgtggaaatt
atttttgataattcagacaacaggctaccaattgataaagaggaagtttcgcttcgcaga
gtcattggagccaaaaaggaccaatatttcctagacaagaaaatggtgacgaaaaatgat
gtgatgaatcttcttgaaagtgctgggttttctcgcagtaatccctactatattgtcaaa
caaggaaagatcaatcagatggccacagctcctgactctcagagactgaagctgttaaga
gaagtagctggtactagagtgtatgatgagcggaaagaagaaagtatttccttaatgaaa
gaaacagagggtaaacgagagaaaatcaatgaattgttgaagtacattgaagagcgatta
cataccttggaagaagagaaagaagagctagctcagtatcagaagtgggataaaatgagg
agagcattagaatataccatttataaccaggaactcaatgaaacacgtgctaaacttgat
gagctttctgccaaacgagagacaagtggggaaaaatcaaggcagctgagagatgcacaa
caagatgctagagataaaatggaggatatagaacgtcaggttcgagaactgaaaacaaag
atttcagcaatgaaagaggagaaggagcaactcagtgctgaaagacaggagcagattaaa
cagaggaccaaattggaacttaaagctaaggacttgcaagatgaacttgccggcaacagt
gaacaaagaaaaagactgttaaaggagagacagaagcttcttgagaaaattgaagagaag
caaaaagaactagcagaaacggaacccaaattcaacagtgtaaaagaaaaagaagaacga
ggaattgctagactagctcaagctacccaggaaagaacagatctctatgcaaaacaaggc
cgaggaagccagtttacctccaaagaagaaagggataaatggattaaaaaggaactcaaa
tctctagatcaagcaatcaatgacaaaaaacgtcagattgcagcaatacacaaggattta
gaagatacagaggctaataaagagaaaaatctggagcaatacagtaaattggaccaagat
cttaatgaggtgaaagctcgtgttgaagaactggacagaaaatattatgaagtgaaaaac
aaaaaagatgaactgcagagtgaaagaaattatctgtggagagaggagaatgcagaacag
caagctcttgctgcaaaacgagaggatttagagaagaaacagcaacttcttagagcagca
acaggaaaggccatcctaaatggtatagacagtataaacaaagtcttggagcactttcgc
cgaaaaggcataaaccaacatgttctaaatggttaccatggcattgtgatgaataacttt
gagtgtgagcctgctttctacacttgtgttgaagttactgcagggaacaggttattttat
cacattgtggattctgatgaggtcagtacaaagatcttaatggagtttaataagatgaac
cttcctggagaagtaactttcctgcctctcaacaagctggatgttagagatactgcttac
cctgaaactaatgatgctattcctatgatcagcaaattgagatacaaccccagatttgac
aaagccttcaaacatgtttttggaaagactcttatttgtcgtagcatggaggtgtctacc
cagttggcaagagctttcactatggattgtattactttggaaggtgatcaagtcagccat
cgtggtgctctgactggaggttattatgacacgagaaagtctcggcttgaactgcaaaaa
gatgttagaaaggcagaagaagaacttagtgaacttgaagcaaaactcaatgaaaacttg
cgcagaaacattgaaaggattaataatgaaattgaccaactgatgaatcaaatgcagcag
attgagacccaacagagaaaattcaaagcttcccgagacagtatcttgtcagagatgaaa
atgctgaaagagaagaggcagcagtctgagaaaacttttatgccaaagcaacgcagcttg
caaagcttggaggcaagtttacatgctatggaatcaactcgagaatccttaaaagcagaa
ttgggaacggacttgctgtctcagctcagcttagatgatcagaaacgagtggatgcactt
aatgatgagattcgacagttgcaacaagaaaatagacagcttttgaacgagcggattaag
ttggaaggcatcatcacaagagttgagacatatctcaatgagaatctcagaaaacgttta
gaccaagtggaacaagagttgaatgagctacgagaaacagaaggtggcactgttcttact
gccacaacatcagaactcgaggccatcaataaacgagtgaaggataccctggcacgatca
gatgatctggataactcaattgacaaaacagaagcagggattaaagatctccaaaaaagt
atggaacgctggaagaacatggagaaagaacacatggatgccattaaccacgacacaaag
gaacttgaaaagatgaccaacaggcaaggcatgcttctcaagaagaaggaagaatgcatg
aagaaaatcagggaattgggctcacttccacaggaggcctttgaaaaatatcagacatta
agtttaaaacagttattccgtaaactggagcagtgtaacacggagctgaaaaaatacagt
catgtcaataaaaaagctttagaccagtttgttaacttctcggagcagaaggagaagctg
ataaaaagacaggaggaactggacaggggctacaaatctattatggagttgatgaatgtc
cttgaactcagaaaatatgaagctatccagctgactttcaaacaggtgtcaaaaaacttc
agtgaggtgttccagaaattagtccctggtggcaaagctacactagtgatgaagaaagga
gatgtggagggcagtcagtcccaggatgagggtgaaggcagcgcggagagcgagagggga
tctggatctcagagcagtgtgccatctgtagaccagttcactggagttgggattagggtg
tcatttacaggaaaacagggtgaaatgagggaaatgcagcaactttcagggggacagaag
tcattggtggctcttgccctgatttttgctatccagaaatgtgatccagctcctttttac
ctgtttgatgaaattgatcaagctctggatgctcagcacagaaaagctgtttcagatatg
attatggaactagctgaacatgcccagtttattacaacaacttttaggcctgaactgctt
gagtctgctgataaattctatggtgtaaaattcagaaataaggttagtcatattgatgtg
atcacagcagagatggccaaagactttgtggaagatgacaccactcatggttaa
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