Carettochelys insculpta (pitted-shelled turtle): 142015597
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Entry
142015597 CDS
T11194
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142015597 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ciz03021
]
142015597 (TAF5)
03036 Chromosome and associated proteins [BR:
ciz03036
]
142015597 (TAF5)
Transcription machinery [BR:
ciz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
142015597 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
142015597 (TAF5)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
142015597 (TAF5)
STAGA complex
142015597 (TAF5)
TFTC complex
142015597 (TAF5)
SAGA complex
142015597 (TAF5)
SLIK complex
142015597 (TAF5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_Aladin
DSE1_N
PAC11
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR41
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_SPT8
ASA1
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_NOL10_N
Beta-prop_Nup120_160
Tricorn_2nd
PEP5_VPS11_N
CDK5RAP3
Beta-prop_ACSF4
eIF2A
RAB3GAP2_N
VID27
Motif
Other DBs
NCBI-GeneID:
142015597
NCBI-ProteinID:
XP_074855333
LinkDB
All DBs
Position
7
Genome browser
AA seq
787 aa
AA seq
DB search
MAALSEEPAEVVVKPDPDGGVPPQSSPAPPPAAPPTTAPAEGEAAAAAAAAAASTGEAAP
AKPPPPGPAASPAPTDRQTLLAVLQFLRRNNLRDSEDILRREARLLGEDLAAGTLSPSGA
GAQGTPGGETEAAGGEALLSRVAAGSGTAGGSVAAGASATPGGAPVVAAPPGKVGGVPVE
DQPDVSAVLSAYNQQGDPALYEEYYSGLKHFIECALDCHRAELSQLFYPLFVHMYLELVY
NQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDS
YQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVF
FGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKRESMGSKSKKQDPNAPPQNRIPLPELK
DSDKLDKIMNMKEATKRVRLGPEYLPSICFYTFLNAYQGLTAVDTTDDSSMIVGGFADST
VRVWSVTPKKLRSVKSAAELGLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSP
DRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWA
TDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIH
SLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVYALRFSRDGEILASGSMDN
TVRLWDAVKVFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVIHLHFTRRNLLLA
SGAYSPQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctgtctgaggagccggctgaagtggtggtgaagccggacccggatggcggt
gtcccgccgcagtcttctccggctcccccacccgccgctccccccaccacggcgccggcg
gagggggaggcggcggcggcggcggcggcggcggcggcgagcacaggggaggccgctccc
gccaagccgccccccccgggtccggccgcctcccccgctcccacggaccgtcagaccctc
ctggccgtgctccagttcctgcgtcgcaacaacctccgcgattctgaggacatcctgcgc
cgggaggcacggctgctgggggaggatttggccgcgggtaccctcagcccctcgggagcc
ggtgctcaggggacccccggtggggagacagaggctgccgggggcgaggcgctgctcagc
agggtcgccgccggttctggcacggcaggagggagcgtcgctgctggcgcctctgcgaca
cccgggggcgcccctgtagtcgcagcaccgccaggaaaagttggaggagtacctgtagaa
gatcagccagatgtgagtgcagtgttgtctgcctacaaccagcagggggatccagctcta
tatgaagaatactacagtggactgaagcacttcattgagtgtgccctagactgtcatcgt
gctgaattatcccagttgttttaccctctctttgtgcatatgtatttggaattggtttac
aatcagcatgagaatgaagcaaagtctttctttgaaaaatttcatggagatcaagagtgc
tattatcaggacgacctgcgtgtattatctagtttaaccaaaaaggagcacatgaaaggg
aatgagaccatgctagatttccgaacaagcaagtttgtcctgcgcatttctcgtgactct
tatcaactcttgaagagacaccttcaggaaaaacagaacaatcagatctggaacattgtt
caggagcatctctacattgatatttttgatggaatgcctcgcagtaaacaacagatagat
gctatggtgggaagcttggcaggggaggctaaacgtgaggctaataaagcaaaggttttc
tttggcttattaaaagaaccagagattgaagtacctttggatgatgaagatgaagaaggg
gagaatgaggaaggaaaaccaaagaagaaaaaacctaaaagagagagcatgggatcaaaa
agtaaaaaacaagaccctaatgctcccccacaaaacagaattcctcttcctgaactgaaa
gactctgacaagttggataaaataatgaacatgaaggaagccacaaaacgtgtgcgtctt
ggtccagaatatttgccttctatctgtttctacacattccttaatgcctaccagggtctt
actgctgtagataccactgatgactctagcatgattgtaggcggttttgctgactccact
gtgagagtatggtctgtgacaccaaaaaaactacgcagtgtgaaatcagcagcagaactc
ggtctcatagacaaagaatcagatgatgtcttggagaggatcatggatgagaaaacagca
agtgaattgaagattttatatggtcacagtggacctgtctatggtaccagcttcagtcct
gataggaactacctcttgtcctgttcagaggatggcactgtcagattgtggagccttcaa
acattcacatgcctcgtgggatacaaaggacacaactatccagtgtgggatacacagttc
tctccctatggatattactttgtatcaggtggacatgatagagtggctcgcttgtgggct
acagatcactatcagcctttacggatttttgccggccaccttgctgatgtcacatgtacg
cggtttcaccccaattccaactatattgccacaggctcggcagacaggactgtacgactc
tgggatgttctgaacgggaattgtgtaagaatcttcactggacataagggaccaattcat
tcattggcattttctcctaatggaagattcttggctactggagcaacagatggaagagtg
ctgctttgggacattggccatggtttgatggtgggagagctgaaagggcatactgacaca
gtctatgcactcagattcagtagagacggggaaattttagcatcaggttcaatggataac
acagtccggctttgggatgctgtcaaagtatttgaagacttagaaactgatgattttact
acagccactggacatataaacctgcctgaaaactcacaggacttgcttttgggtacatac
atgaccaaatcaactccagtcatacacctccattttactcgcagaaacttgctactagct
tcaggagcatatagtccacaataa
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