Carettochelys insculpta (pitted-shelled turtle): 142016017
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Entry
142016017 CDS
T11194
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03020
RNA polymerase
ciz04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
142016017 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
142016017 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ciz03021
]
142016017 (POLR3A)
Enzymes [BR:
ciz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
142016017 (POLR3A)
Transcription machinery [BR:
ciz03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
142016017 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Bac_DNA_binding
Motif
Other DBs
NCBI-GeneID:
142016017
NCBI-ProteinID:
XP_074856144
LinkDB
All DBs
Position
7:complement(14521714..14578397)
Genome browser
AA seq
1401 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNHHSPLLYGVLDHRM
GTSEKDRPCETCGKNLAECLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCCVLLSSE
ERKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKSTCPYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDQAVSSFLQSFETAIEHNKEVESLLGRAQENLTPLVVLHLFKRIPAEDIPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANLNFMRKLVRNGPEVHPGANF
IQQRHTQMKRFLKYGNREKMAQELRYGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASVLVGKDEKIKVRLPPPAILKPVTLWTGKQV
FSLILKPSDDCPVKANLRTKGKQYCGRGEDLCINDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHCKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCQSEPALSKNELVLTAESIMKKNEFLC
CRDSFLQALTETGYAKYNEEIKKFIKSISEKIKKTRDKYGINDNGTTEPRVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKAISTPIITAHLDIDDDSDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYV
LQSLKEELPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTTS
NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
DPTPPKRPLIFDNEFHIPLIT
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttccgcgagaccgacgtggccaagaaaataagccacatctgcttt
gggatgaaatctccagaagagatgcgccagcaggcccacattcaggtggtcagtaagaat
ttgtacagccaggacaaccaccactctccactgctgtatggagtactagaccatcgtatg
ggtaccagtgaaaaggaccgcccatgtgaaacctgtggaaagaatctagcagagtgttta
gggcattatggctacattgacttggagctgccatgtttccatgttggatactttaaagct
gtcataggcatcttacagatgatctgcaagacctgttgctgtgtcctgttgtcctcagag
gagaggaaacagtttttggattatctgaagaggcctggtctgacctacctgcaaaaacga
ggattgaaaaagaaagtctcagaaaagtgtagaaagaaaagcacctgcccttattgtggt
gctttcaatggtactgtaaagaagtgtgggttgttgaagataatccatgagaagtacaag
accaataaaaaagtggtggatcaagcagtatccagtttccttcagtcctttgaaactgcc
atagaacataacaaagaagtagaatccttactgggaagagctcaggaaaacttgactcct
ttagtggtgttgcacctctttaagcgaatcccagcagaagatatccctctgcttctgatg
aacccagaagcaggaaaaccttcagacttgatcctgacacgactcctggtacctccactg
tgcatcaggccctctgttgtaagcgacttgaagtctggaaccaatgaagatgacttgacg
atgaagcttacagagataattttcctgaatgatgtaatcaaaaagcacaggatatcagga
gccaaaacgcagatgataatggaagactgggacttcctccagctacagtgtgccctctac
attaacagtgagctctcagggattcctcttaacatggcacccaagaaatggaccagaggt
tttgttcaaagactcaaagggaagcagggtcggtttagaggcaatctgtctggaaagcgt
gtggacttctcgggcaggactgtcatttcacctgaccccaacttacgaatagatgaagtg
gctgtgcctgttcatgttgcaaaaatattaacatttcctgaaaaagtgaacaaagctaac
ctaaattttatgaggaaacttgtacggaatggtccagaagttcaccctggagccaatttc
attcagcagaggcacacacaaatgaaaaggtttttgaaatacggaaaccgtgagaagatg
gcacaggagctcaggtatggtgacattgtggagaggcatctcatagatggagatatagtt
ctgttcaaccgacagccgtctctgcacaaactgagcatcatggctcacatagctagagta
aaaccccataggaccttcaggtttaacgaatgtgtttgcacaccatataatgctgatttt
gatggagatgaaatgaaccttcatcttccacaaacagaggaggccaaagcagaagcattg
gttcttatggggaccaaagcaaacttagtaacaccaagaaatggagagcctttgattgct
gctattcaagattttcttactggtgcctatcttctcacactaaaagacaccttttttgac
cgagctaaggcctgtcaaattattgcttctgtcctggttggcaaggatgagaagattaaa
gttcgccttccacctccagcaatcttaaagccagtaaccctgtggacaggaaagcaggtc
ttcagcctgattctcaaacctagtgatgactgtcctgtgaaagccaatctccgaaccaag
ggaaaacagtactgtggcagaggagaagatctgtgtatcaacgattcttatgttacaatc
cagaatagcgagttgatgagtggcagtatggacaaaggaacgttaggatctggatcgaag
aacaatatcttttacattctgctgagagactgggggcaggtagaggctgcagatgctatg
tcacggctagcgaggcttgctcctgtttatctttctaatcgcggcttctcaattgggatt
ggtgatgtaactccaggacaggggctgctgaaagctaaatatgaacttctgaatgctggc
tataagaaatgtgatgagtacattgaagctttgaacactggcaagctgcagcaacagcct
ggctgtactgcagaagagacattggaggcattaatccttaaagaactctctgtgatcaga
gaccacgctggcagtgcctgtctccgagaactagataagagtaacagtccccttattatg
gctctctgtggttctaaaggttccttcattaacatatcccagatgattgcctgtgtagga
cagcaggccatcagtgggtcacgagtgcctgatggttttgaaaatcggtctctgcctcac
ttcgagaagcactgtaagcttccagcagcaaaaggctttgttgccaatagcttctattct
ggcttgactcctactgagttctttttccatacaatggctggtcgggaaggtctagttgat
acagctgtaaaaacagccgaaactggatatatgcagagacggctggtgaaatctcttgaa
gatctttgctctcaatatgatctgactgtcagaagttctactggtgatattatacagttc
atttatgggggagatggcttagatcctgccgctatggaagggaaagatgagcctttggaa
ttcaagcgtgtcctggacaatatcagagcagtgtatccatgtcaaagtgaaccagctctt
agtaaaaatgaattggtgttaactgctgagtccattatgaagaagaatgaattcctttgc
tgccgagacagtttcctacaggcgttaactgagacaggttatgcaaagtataatgaggag
attaaaaagttcatcaaaagcatttctgaaaagatcaagaaaacaagggacaagtacggc
attaatgacaatggcaccacagagccacgtgtcttgtaccagttggatcgaattacacca
acacagctagagaagtttctagagacgtgtagggacaaatacatgagggcacagatggag
cctggctcagcagtaggagctctgtgtgctcagagtattggtgagcctggcacacagatg
actctgaaaactttccactttgctggtgttgcctcaatgaacatcactttaggtgttcca
agaatcaaagaaattattaatgcctccaaagcaatcagcacacctattatcaccgcacac
ttggacatcgatgatgattctgattttgcccgtctggttaagggaagaattgagaaaacc
ctattaggagagatttcagaatacatcgaagaagtgtttcttcctgatgattgctttata
cttgtcaagctctcactggagcggattagactgctgagactagaggtgaatgcagagact
gtgcgatattctatttgcacatctaagctaagagtgaagccgggggatgttgctgtccat
ggagaggcagttgtgtgtgtgactcctcgggagaacagcaagagttcaatgtattatgtc
ctgcaatccctgaaagaagagctaccaaaggttgtagtgcaaggtatcccagaagtgtct
cgagctgttattcacattgatgaacaaagtggcaaggagaaatacaaacttctggttgaa
ggtgataacctacgagctgtcatggccacgcatggagtcaagggaacaaagaccacttct
aacaatacttatgaggtagagaaaaccctagggattgaagctgctcgaacaaccattatc
aatgagattcagtacaccatggtaaaccatggtatgagcattgacaggagacatgttatg
ctgctctcagatctgatgacatacaagggtgaagttctgggcattactaggttcgggctg
gcaaaaatgaaggaaagcgttctaatgctggcttcttttgaaaagactgcagaccatctc
tttgatgctgcctactttgggcagaaggattctgtgtgtggtgtttctgaatgtatcatc
atgggaattccaatgaacattggaacaggactcttcaaactgcttcacaaagcagataag
gatccaacccctcctaaaaggccccttatttttgataatgaattccatattccacttatc
acatag
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