Carettochelys insculpta (pitted-shelled turtle): 142016084
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Entry
142016084 CDS
T11194
Name
(RefSeq) nucleolar RNA helicase 2-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ciz03009
]
142016084
03036 Chromosome and associated proteins [BR:
ciz03036
]
142016084
Enzymes [BR:
ciz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142016084
Ribosome biogenesis [BR:
ciz03009
]
Eukaryotic type
Pre-60S particles
Helicases
142016084
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
142016084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142016084
NCBI-ProteinID:
XP_074856336
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Position
7:30404273..30424061
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AA seq
802 aa
AA seq
DB search
MGAACRTLLSGAGWPGAGVVGLPALLPRLARPTPASGLGLRLRLLQPRAVPFSRSQGWGP
AFTVSPHFLCAGAGAGFAPFATATDQPSCSAPELRGTQPEEMPAADHLPAGSEPETPLEG
EAARAGRRRKHKDKKEKKSKPRGKSKQLKSQKEENELSADDLGAPKPKKKKKATENMNGD
IKENSSENQVKSFMSNGIVHSKAQCNSTEASSAEYDSDQEPVKELTEEEKEGAFSNFAIS
KDTIELLKARGVNYLFPVQVKTFQPIYDGKDVIAQARTGTGKTFSFALPLIEKLQVDALE
RRRGRAPKVLVLAPTRELANQVAKDFKDITKKLTVACFYGGTPYNGQIEHIKNGIDILAG
TPGRIKDHLQNGKLDLSSVKHVVLDEVDQMLDMGFAEQVEEILAFAYKKDSEDNPQTLLF
SATCPHWVYDVAKKYMKSRYEQIDLIGKKTKKTAMTVEHLAIECHWSQRAAVIGDVIQVY
SGSHGRTIIFCETKKDANELAMNASIKQDAQSLHGDIPQKQREITLKGFRNGVFEVLVAT
NVAARGLDIPEVDLVIQSSPPKDVDSYIHRSGRTGRAGRTGICICFYQRKEEDQLRHVEQ
KAGITFKRVGVPTATDIIKASSKDAIRFLDSVPPSAIDYFKQSAQQLIEEKGAVEALAAA
LAHISGATSIEQRSLLNSDAGYVTMILQCSIEMHGIGYAWRGLKEQLGEEIDNKVTRMHF
LKGKTGVCFDVPAAELSSIKEQWQDSRRWQLAVATELPELEETIREPGQRFSNFRNGWQR
GGFNKSERFENRGQKRSFHRAF
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgggagccgcgtgtcgcacgctgctgtctggagccgggtggccgggcgctggggttgtg
gggctcccggccctgctcccccggctcgcgcgccccacgcccgcttccgggctggggctg
cggctgcggctgctacagcccagggctgtgcccttctcccgcagccagggctggggcccg
gctttcactgtctcgcctcacttcctgtgcgccggcgctggggcggggttcgctcctttc
gccacagccaccgatcagcccagctgctcggcgcccgagctccgcgggacacagccggaa
gaaatgcccgcagccgaccacctgccggctggcagcgagcccgagacccccctggaaggc
gaggctgcccgggcaggcaggaggaggaagcacaaggataaaaaggagaagaagtctaaa
ccccgtggtaaatctaagcagctgaaatcccaaaaagaggaaaatgagctatctgcagat
gatcttggtgctcctaagcccaaaaagaagaaaaaggctacagaaaacatgaatggagac
atcaaagaaaacagctcagagaaccaggtgaaatccttcatgagcaatggaattgtccac
tcaaaagctcagtgtaattccactgaagcatcaagtgctgagtatgacagtgaccaagag
ccagtaaaggagctgacagaagaagagaaagaaggtgccttttccaatttcgctatctcc
aaagacacaattgagcttcttaaagctcgaggagtaaattacttgtttcctgtgcaagtg
aaaaccttccagcccatatatgatggcaaagatgtgatagctcaggctcgaactggaact
gggaaaacattttcttttgctcttcctttgattgaaaaacttcaggtagacgctctagag
aggaggagaggccgcgcgccaaaggtgctagttcttgctccaacgagagagctggcaaac
caggtagccaaggactttaaggatatcacaaagaaactgacagtggcttgtttttatgga
ggaactccgtataatggacagattgagcatattaaaaatggcattgacatcttagctgga
actccagggagaatcaaagaccaccttcaaaatggcaagctggacctgtctagtgtgaag
catgttgttttggatgaagttgatcaaatgttggacatgggctttgctgaacaagtggag
gaaattctagcatttgcatacaaaaaagattctgaagacaacccccaaacgctgctgttt
tctgcaacttgtccacattgggtgtatgatgtggctaaaaaatatatgaaatccagatat
gaacaaattgatcttattgggaagaagaccaaaaagacagctatgactgtagagcatttg
gctatagagtgtcactggtctcagagagcagcagttattggggatgttattcaggtctac
agcggcagccatggacggaccatcatcttttgtgagactaaaaaggatgcaaatgaactg
gccatgaatgcttctattaaacaggatgcccagtcattgcatggtgacattccacagaaa
cagagagagatcacattaaagggtttcagaaatggagtatttgaagttctggttgcaacc
aatgtagcagcccgtggtttagatattcctgaagttgacctggtcatacagagctcaccc
ccaaaagatgtggattcatatatccatcggtctgggcgcacaggaagagctggacggact
ggaatttgtatctgtttttatcaacgaaaggaagaagatcaattaagacatgtggaacaa
aaagcgggcattacatttaagcgtgtaggggtgcctacagcaacagatataattaaagct
tccagtaaagatgctatcaggtttttggattctgttcccccttctgccatcgactatttc
aaacaatcagctcagcagctaatagaggaaaagggggcagtggaagccctggctgcagca
ttagcccatatttctggggctacttccattgaacaacgttccttgctcaactcggatgcg
ggctatgtgacaatgatattgcaatgttcgatagagatgcatggcattggctatgcctgg
cgaggcctgaaagaacagcttggtgaagaaatagacaataaagtaaccagaatgcatttt
ctcaagggaaaaacgggtgtgtgcttcgatgtgcctgcggctgagctaagtagtataaag
gagcaatggcaagactcaagacgctggcagctggctgtagcaacggagttacctgagcta
gaagaaactatacgtgaaccaggtcaacgtttctctaacttcaggaatgggtggcaacgt
ggtggctttaacaaaagtgagagattcgaaaacagaggccagaaacgaagttttcacaga
gcattttag
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