Carettochelys insculpta (pitted-shelled turtle): 142016735
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Entry
142016735 CDS
T11194
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
142016735 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142016735 (BARD1)
04121 Ubiquitin system [BR:
ciz04121
]
142016735 (BARD1)
03036 Chromosome and associated proteins [BR:
ciz03036
]
142016735 (BARD1)
03400 DNA repair and recombination proteins [BR:
ciz03400
]
142016735 (BARD1)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
142016735 (BARD1)
Ubiquitin system [BR:
ciz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
142016735 (BARD1)
Chromosome and associated proteins [BR:
ciz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
142016735 (BARD1)
DNA repair and recombination proteins [BR:
ciz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
142016735 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
Ank_KRIT1
zf-RING_5
ANK_LRRK2
zf-C3HC4_2
zf-C3HC4
NIBRIN_BRCT_II
Motif
Other DBs
NCBI-GeneID:
142016735
NCBI-ProteinID:
XP_074857022
LinkDB
All DBs
Position
8:5820283..5888203
Genome browser
AA seq
805 aa
AA seq
DB search
MRAALRARSGNRLAEGPSPAARAMEPAGCWASTRAALRRLERRLLCSRCINILKEPVCLG
RCEHVFCVACVGDCIGTECPVCHTPAWVQDVQINRQLDNMIQLCSKLRELLGKDSTDSAD
EMFTSPGPDHETRTKKRQIKMWFSPRSRKIRCVLNNNTIQKQNPLVTNDEITQLGQSSYD
FLPSPPEEKSSKMTKQPLPRSKKNLKKKSLADINQVWGIEKKKQKEGSRTDGETQNELKE
KTVTFCSQSLVLCSPEPKCVEETIDQESVTGINLKNGSEPRLEMVTQINPTEDKDNIKVT
CSAQVSTMKGCNTEKSLPPENEITPLKRGRQQSMSPTVSCSKRLRRSRQSGDISSVNQKV
CSAEVAVLSTVKICAATEHGTPTHISSRPFKRTGAAWSKTRSSAVFQEINSPSLSDTPPT
PVTSNTHHQMEATHSPSLLKKSPSSNTITKRNHRGETLLHVASIKGDVTAVEKLLKNGAD
PNVKDHAGWTPLHEACNHGHKKVVELLLQHRALVNTTGYQNDSPLHDAAKNGHVDIVELL
LSHGASQEAVNIFGLRPVDYAETEKMKSVLMLPMKNESHSFTQCSEQANPGLVREGPLVL
LGTSLNSEQQKSLTKLAAILKARKCTEFNSTVTHVIIPDGPMRSTSKCMLAILAGCWVLK
FPWVKACLQSGIREQEEKYEICGGPRRGRLNQEQLLPKLFDGCYFYFLGTFSHHHKNDLI
QLVKAAGGQILVRQPKPDSDVTQTISTVAYHAEPGSDQSFCTQYIIYDVSSKYNPNKIRQ
GKVWMAPSSWLIDCVMSFQLLPVRK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctgcgctgcgggcccgctccgggaaccggctggcagaggggcccagccccgcg
gcccgcgccatggagcccgccggttgctgggccagtacccgggccgccctgcggcggctg
gagaggcggctgctctgctcccgctgcattaacatccttaaggaacctgtgtgcttagga
agatgtgaacatgtcttctgtgtagcttgtgtgggtgactgcattgggacagaatgccca
gtctgtcatactccagcctgggtgcaagatgtgcaaataaacaggcagctagacaacatg
atccaactgtgcagcaaactgcgagaactacttggcaaggactccacagattctgcagat
gaaatgttcacatcaccaggtcctgatcatgaaacaagaactaaaaagaggcagataaaa
atgtggttcagcccacggagtaggaagataagatgtgtcctaaacaataatactattcag
aagcagaatccactggtaactaatgacgagattactcagctgggccagtcttcttatgac
ttccttccttctcctcctgaagagaaatcttctaagatgaccaagcaaccactacccaga
tcaaagaaaaatctgaagaaaaagagtctagcagacatcaaccaagtgtggggcatagag
aagaaaaagcagaaagagggcagtagaactgacggggagacccaaaatgaattgaaagag
aagactgtgaccttctgcagccaatctttagttttatgcagtccagaaccaaagtgtgtg
gaggagacaatagatcaggagtctgtaacaggaattaaccttaagaatggaagtgagcca
cgcttggaaatggttacacagataaaccccacagaggacaaagacaacattaaggtcaca
tgttctgcacaagtgagtacaatgaaaggttgtaatacagagaaatctctgccacctgaa
aatgaaattactcctttaaaacgtggaaggcagcagtccatgtcccccactgtatcttgt
tccaaaagactgagaagaagcaggcagagtggtgatataagctcagtcaaccagaaagtt
tgcagtgctgaggtagctgtcttgagcactgttaaaatctgtgcagccactgaacatgga
actccaactcacatctcctctcgtccatttaaacgtactggtgccgcatggtcaaagacc
agaagctctgcagtttttcaagaaataaatagcccttcactttcagacactcctcctact
ccagtcacttcgaatactcaccatcaaatggaagcgacacacagcccttcactcttgaag
aagtcgcctagtagtaatacaattaccaaaaggaatcatagaggagagaccttgcttcat
gttgcttcaattaagggtgatgtaacagccgttgaaaaattactgaaaaatggagcagac
cccaatgttaaagatcacgctggatggacgccattgcacgaggcttgtaatcatgggcac
aagaaggtggtggagctgttgctgcagcacagggcgttggtgaacactactgggtatcag
aatgactcgccacttcatgacgctgccaagaatgggcacgttgatattgttgagctgctg
ctttcacatggagcctcccaggaagcagttaatatattcggtctgcgccctgtggactat
gcagaaactgaaaagatgaagtctgtgctaatgctaccaatgaagaatgaatcgcattcg
tttactcagtgctcagaacaggcaaacccaggccttgtccgggaagggcctcttgttcta
ctgggaaccagtctcaattcagagcagcaaaaatcactgaccaagcttgcagcaatacta
aaggctagaaaatgtaccgagtttaacagcacagtgactcacgtcattattcctgatggt
ccaatgcgaagtactagcaaatgtatgctggccattctggctggatgttgggtcctgaaa
tttccgtgggtgaaggcatgtttgcagagtggaatacgcgaacaagaggaaaagtatgaa
atctgtggcggcccacgaagaggcagactcaaccaagaacagctgctgcctaagttgttt
gatggctgttacttctattttctgggaactttcagtcaccaccacaagaatgacctcata
cagctggttaaagcagcaggaggacaaatcctcgttaggcaaccaaagccagatagcgac
gtgactcagaccatcagcactgtggcgtaccatgccgaaccaggttctgatcagagtttc
tgcacgcagtacattatctacgatgtgtcttctaaatacaacccaaataaaattcgccaa
ggtaaagtctggatggccccttccagctggctcatagactgtgtgatgtcctttcaactg
ttacctgttagaaagtaa
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