Carettochelys insculpta (pitted-shelled turtle): 142017041
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Entry
142017041 CDS
T11194
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ciz03041
]
142017041 (DDX18)
03009 Ribosome biogenesis [BR:
ciz03009
]
142017041 (DDX18)
Enzymes [BR:
ciz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142017041 (DDX18)
Spliceosome [BR:
ciz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
142017041 (DDX18)
Ribosome biogenesis [BR:
ciz03009
]
Eukaryotic type
90S particles
Helicases
142017041 (DDX18)
Pre-60S particles
142017041 (DDX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
142017041
NCBI-ProteinID:
XP_074857738
LinkDB
All DBs
Position
8:61727529..61746380
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AA seq
657 aa
AA seq
DB search
MAAVAGNLPMRLLRRKIHKRNLKLRQRNLALQGAGPPVETRSVDMLEEATNNAISEDLVE
KLKEKNIKQPKLMPNSEVAAEAKNPELKKKKKKKRQIINTEGGTETKKAKIEEQKSAAMD
DAKHSKDPEMEENNQDPEEREVVDEDTEEPSLPLGVTGAFEDTSFASLSDLVSENTLKGI
TDMGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAIELIYKLRFMPRNGTGV
LILSPTRELAMQTYGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGRLLD
HMQNTPGFMYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDL
AKISLKKEPLYVGVDDNKETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSS
CMSVKYHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEV
DWIVQYDPPDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRYLKQARVPLSEFEFS
WSKISDIQSQLEKLIEKNYFLHKSAQEAYKAYIRAYDSHSLKQIYNVSNLDLSKVSLSFG
FKVPPFVDLNVNSSQGRRLQKRGGGGGFGYQKSKNVHKSKIFKHITKKKSDGRQFSR
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggttgccgggaacctgcccatgcggctgctccgcaggaagatccacaagcgc
aacctcaagctgcgacagcgcaacctggcgctccagggggccgggccgccagtggagaca
agatctgtggatatgttggaggaagctacaaacaatgctatttctgaagacttagtggag
aaacttaaagagaagaatataaaacaacccaaactaatgcctaacagcgaagtagctgca
gaagcaaaaaaccctgaattgaagaaaaagaaaaagaaaaaaaggcaaataattaacaca
gaaggaggtacagaaactaaaaaagcaaagattgaagaacaaaagtctgcagccatggat
gatgcaaaacatagtaaggatcctgaaatggaagaaaataatcaggatcctgaagagaga
gaagtagtggatgaggatactgaagagcctagtttgcctctcggtgtaacaggtgctttt
gaagacacctcatttgcttcgctgtctgatctagtcagtgagaacacactgaaaggaata
actgatatgggctttacccacatgacagaaattcaacataaaagtattaaaccccttctg
gaaggcagagacattctagcagctgcgaaaacgggcagtggcaaaacactcgcattcctc
attcctgccatagaactcatctacaagttaagattcatgcctaggaatggaacgggtgtt
ctgattctttcacctactcgagagcttgccatgcagacttacggggttctgaaagaactg
atgactcatcatgttcacacctatggcctgataatgggaggcagtaacagatcagctgag
gcacagaaacttgcaaatgggatcaatattatagtggcaacgccaggcagacttctggac
cacatgcagaacacccctgggtttatgtacaagaaccttcagtgtctggtaatagatgaa
gcagatcgcatcctggaggttgggtttgaggaagaaatgaagcagatcataaaacttcta
ccaaagcgcagacagaccatgcttttttctgctacacaaacccgaaaggttgaagacttg
gccaagatatctctgaaaaaggagccattatatgttggagttgatgataacaaggaaaca
gctacagtagatggtcttgaacagggatatgtagtgtgcccatctgaaaaaaggttcctt
ctgctcttcacattcctcaagaaaaacagaaagaaaaagctgatggtctttttctcttca
tgtatgtctgtgaaatatcattatgagctactcaactatattgacttgccagtcatggcc
attcacgggaagcagaagcaaactaaacgtaccaccacgtttttccagttctgtaatgca
gattctggaattctgttgtgcactgatgtagctgctagaggactggatattcctgaagtt
gattggattgtccagtatgaccctccagatgacccaaaggaatacattcatcgtgttggc
agaaccgccagaggtataaatggaagaggacatgctttactaattttacgaccagaggaa
ttgggtttccttcgttacctaaagcaagccagggtaccattaagtgaatttgaattttcc
tggtccaaaatttcagacatacagtctcagcttgaaaagttgattgagaagaactatttc
cttcacaagtcggcgcaggaagcatacaaagcatacattagagcttatgactcccattct
ttgaaacagatctacaatgtcagcaacttggatctgtccaaagtttccctttcttttggt
ttcaaagttcctccgtttgttgacctcaatgtgaacagcagccaaggtagaagactgcaa
aaaagaggtggaggtggaggatttggttaccagaaatccaagaacgtccacaaatccaaa
atcttcaaacacattactaagaaaaagtcagatggccggcaattttctcgttga
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