KEGG   Carettochelys insculpta (pitted-shelled turtle): 142017205
Entry
142017205         CDS       T11194                                 
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
ciz  Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:ciz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ciz03032]
    142017205 (RIF1)
DNA replication proteins [BR:ciz03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    142017205 (RIF1)
SSDB
Motif
Pfam: Rif1_N TNP-like_RNaseH_N
Other DBs
NCBI-GeneID: 142017205
NCBI-ProteinID: XP_074858059
LinkDB
Position
8:complement(48569719..48632959)
AA seq 2348 aa
MSASAGPSLLPLLEILEDPAAPQGELTDAHLTIVNRLTGEEGKEFTADVRKHFPRLCKVF
KAHISSPNCELSSAALQALGFCVFNSKITSELPAAEIQELLSTVNSIAVKTADKNIRTRA
LWVISKQTFPSEIVGKEVPSIISTLEIILTKGDVYSMAVEYEALNVVIRLMEQTPTQMGE
EAVRWAKLIIPMVVHSAHKVQLRGATALEMGMPLLLQKQQEVAVLTEHLMTTKVISELQK
LFSTKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGSPVVKKIAFIAWKS
LIDNFALNPDILCSAKRLKLLMQPLSSIHVRTEALALTKLEVWWYLLVRLGPQLPANFEQ
VCVPLIQSTLSLDSSSVVLQGTASRAATNQSLASATPAQKSGSYPFGSPVTPRMNLNSSV
SGTIVIPSIQLLGIEMLLHFLMGPEVLAFSKQNKLVLSLEPLQCPLISSPTFFCKHASTL
INAVQGGFIAVGKEVPDGMLNVIWKDMVGFVKAAIESGNKKERQGSEMLTILLQALKKIV
TSNTFPAQKALSLIEITIRELPSKVLGSPAYQVADMDLLNGTPALFLIQLPFRNNLLEWC
VTDERFFLNLEVLVCCVLSGPTSPLAFSETVFCIISQYAKQVENKEHLWRMWSIVVNPLT
EWINQTSEVNQGDALEHNFNAVYSALVFPISHIFPVQEFPQPTMKSLLRTWSELYRTFAR
CAALVATAEENLCCEELCAKISGLEDETLLNLSVVDGLTHIVSVMVDCINFAPYGTKYQP
KNRSPQTPTDWSKKKREPLGKLTSLFKLLVKLISSFHMLSSKDTQSETLISVGTSLIAIL
HNIISHISSPSVIRTMFTTLSKPLALFYETKLADVSRVYSSLSNKLEKLLGEIIVCLQSH
YTGFYDSDLLEQLSPLLCIIFLHKSKQLRIQSAQFWNATFAKATMLTYPEELKSILNQAK
KKILLLLPSFESVETVEESSGPFSDSTENSQWDPKISGLEVKSGGKRDSLLAQASDLKDK
TTTNHVTTAKLKLEFSSTKTKQSKTLLEEEKSVDFIVIPPETKERVLTEHQKEVLRTKRI
DIPAMYNNLDASQDNTVFSQYAKSQEDSLDEPPLIEDPKEDTENKPQDEKPKSDVHNTTH
EDTGNCTSSEPLENSVNIEDKSVTHIPEGSGSNCEEHLKKSITEMVAKESLIREDSKKHT
TEAVAKESSSGYENTSNVSSSSSSSDVISGTPQPVSRRQSFITLEKFNSSENRPFSPSAL
NRLSGASGTGAVLDKQESTDLSRTPSKIEKPKEENKSSSKSELEGTVIGIKRSSRRQNKK
EHGEIRQSKLTKLEQEKSIRESAVDTPLENKSSTPSQMEEKNCMPDTLIQAPNSTVIEST
TEYKQFVDGMEEEEKCRGPSLDSKENTPPIVPVSTDQISNDDSQVPQMSHNQKILRRSSR
RRSEISESTADSQDKENSQQRKDKRKEDEKSFQKKSPHIKEDASQKQKSVSEKATDRKEN
ANKKECNFHETTTAEDTAPKESDTSRCIEEEMNTHAKKSESDNLKSESDNLKSESDDVQD
SGLDTPGHKNIRGRTRYQTRRASQGLLSSIENSESDSSETREENTKRKRSGKWKNKSDSP
QSKAKERESQNQDQALQEIVTETENLSDVKNKVETSSEVDKDTVLISQSCEVKNKNVYTA
VNEFTGSIDIAKTSVNGQNTNIEQNKTNILVEAFMRPCISEPVLKTRQASKSPGKQRLTE
SYSTIILSESAATSTTSDAVLSPEKSLQKLECQHKRSKRMRRSKSYNCCGENSHQQDKSF
TELKHSVNHAQGEHKNSCSQIAMTELEMANDSHFEDRLSVEPCAMSTPLFPIKKSCLKDS
ERAIKSENGLEGTAFPVEEDLEKLSCIKSKICDPVIQDLEPTTAVDSTEECFSGYVSKEH
VESETGTEAEATEKEELSQNVQMEEISDTGTGNKPDQTKINEPKYDQNDEKMTKDTPIEE
HSPQEMEEGLIFTGTAEATENITSDQEGAEENSNVGSPQKLKELDFVALVKVDESPNGVQ
TRHNWSPSASPSTSILKRGIKRHQEDDSPSPANKIRRVSFANPIFQEGLADDIDRRSPVV
RSHSSNSSPSLRSFKTSSNSQAKHITTPTKGLLSPGSRNPKFKSSKKCLITEMAKESLPC
PTESVYPALVGCKAPVDIILPQITSNIWARGLGQLIRAKNIKTVGDLSTLTAAEIKTLPI
RSPKVSNVKKALKGYHENQVKARGFDEIAALEDREKPENLIDERPFSADDERLETVLSTP
VALGTDGQSTTDLLSQVSALAVQLTSEDLHSYSGSQLFEMQEKLGSMANCIMKNLQSRWK
SPPHESSV
NT seq 7047 nt   +upstreamnt  +downstreamnt
atgagcgcctccgccggacccagcttgctgcccctgctagagatcctggaggacccggcc
gcaccccaaggggagctgacagacgcgcacctcaccatcgtgaatcgcctgactggtgag
gaaggaaaagaattcactgcagatgttagaaaacactttcctcgactgtgtaaagtattt
aaggcacacatttctagtccaaattgtgagctgagcagtgcagcgctacaagctttagga
ttttgtgtctttaactcaaagattacttctgaattacctgcagctgaaatacaagagttg
ctttcaacagtgaacagtattgctgtgaaaactgcagacaagaacatacgtactcgagcc
ctttgggtaatctctaagcagacctttccttctgaaattgttgggaaggaggtacccagt
ataatttctacactagaaatcatacttactaaaggagatgtgtattccatggctgttgaa
tatgaagccctaaatgttgtcatacgtttaatggaacagactccaacccaaatgggagaa
gaggctgtgaggtgggcaaagctgatcattcctatggttgtccattcagctcataaggtg
cagttacggggtgctacagcattggagatgggaatgccattattacttcagaaacagcag
gaagtggcagtcctcactgaacatctgatgactactaaagtaatttcagaactccagaag
ttattctctacaaaaaatgagacctatgtgttgaaattgtggcctttgtttgtcaagtta
cttggaaagacacttcaccgtagtggcagttttatcaactcattgttgcaactggaagaa
cttggatttcgtagtggatcaccagtggtaaagaaaatagccttcattgcatggaagagt
ctgatagataattttgctttgaatccagatatattgtgcagtgcaaaaaggctgaaattg
ctaatgcagccattgagctctatccatgtgagaacagaggctttggcgctgacaaaactg
gaggtctggtggtatttgctggtgaggcttggacctcagctgcctgcaaactttgaacag
gtttgtgttccgttaatccaaagcactttaagtctagattcttcttcagttgtacttcaa
ggaactgcctctcgtgcagcaaccaatcagagtttagcctcagcaacgcctgcacagaaa
tcaggttcttacccatttggaagtccagtcactccaaggatgaacttgaattctagtgta
tcaggaacgatagtgatcccctcaattcaacttttgggaattgaaatgctgcttcacttc
ctgatgggaccggaagttttggctttttctaagcaaaacaaacttgtacttagtctagaa
ccgctccagtgtccactgataagtagccctacttttttttgtaaacatgccagcactctt
ataaatgctgttcagggaggcttcattgcagttggaaaagaggttccagatggcatgcta
aatgttatatggaaggatatggttggttttgtgaaagcagctattgaatcaggcaataaa
aaagaaaggcaaggttcggaaatgttaactatattattacaggctttaaaaaaaatagtt
acctcaaatacatttcctgctcagaaagcattgtcccttatagaaattacaattagagaa
ttaccttcaaaagtattgggatcaccagcatatcaggttgctgacatggatcttttaaat
ggtacaccagctttgttcttaattcaactgcctttccgtaataatcttttggaatggtgt
gtaacagatgagaggttcttccttaatttggaggtccttgtgtgttgtgttttgtctggc
cccacatcccctctggctttcagcgagactgtgttctgcattattagtcaatatgcaaag
caggtggaaaataaggaacatctgtggagaatgtggagtattgtagttaacccactgact
gaatggattaaccagactagtgaagtaaatcaaggagatgcattggaacacaattttaat
gctgtgtacagtgcactggtgttccctataagccacattttccctgttcaagaatttccg
cagcccactatgaagtccttactgcgcacatggtcagagctatatagaacatttgctcgt
tgtgctgctttagtggcaacagcagaagaaaacttatgctgtgaagaattgtgtgccaaa
ataagtggactagaagatgaaacactattaaacctgtctgtggtggatggtctcacccat
attgtatcagttatggttgactgcatcaactttgcaccatatggtactaaatatcagcca
aaaaatagatccccacagacacctacagattggtctaagaagaagagggaacctcttgga
aagctgacctccctctttaaacttctagtgaagttgataagctctttccatatgctcagt
tccaaagatacccagtcagaaacattgatttcagttggcacttcacttattgctattctt
cacaacatcattagccatatttcttcaccttcagtgatcagaactatgtttacaactttg
tcaaaaccacttgcattgttttatgaaacaaagcttgctgatgtatctagagtgtacagt
agtctgagcaacaagttagaaaaacttttgggagagatcattgtgtgtttacaatcccac
tatactgggttttatgatagtgacctattagagcagctttctccattgctctgcataatc
tttctgcataagagcaaacagttacgtatccaaagtgctcagttctggaatgcaacattt
gctaaagccacaatgttgacataccccgaggaattaaaatccatattaaatcaagccaaa
aagaaaattctgcttttactacctagttttgaaagtgttgagacagttgaagagtccagt
ggtccattttctgattctacagaaaattcccagtgggatccaaagattagtggactagaa
gtaaaatcaggaggaaaaagggattcattgctggcacaggccagtgatctaaaagacaag
actaccactaatcatgtaacaacagcaaaattgaaactagaattttcatctacaaagaca
aaacaaagcaagacacttttggaagaagagaagtctgttgattttattgttattccgcca
gaaacaaaagagagggtgttgacagaacaccaaaaagaagttcttaggacaaagagaatt
gatattccagctatgtacaataatctggatgcatcccaagataataccgtgttttctcaa
tatgctaaaagccaggaagattctttagatgaaccacccttaatagaagatccaaaagaa
gatactgaaaacaaacctcaggatgagaaaccaaagagtgatgtgcataatactacacat
gaagacactgggaactgcacatcaagtgagcctctggagaactctgtgaatattgaagac
aaatccgtcactcatattccagaaggttcaggttcaaattgtgaagaacatttgaaaaaa
agcataactgaaatggttgcaaaagaatctttaataagagaagattcaaaaaaacataca
actgaagcagttgcaaaggagtcttcgtctggatatgaaaacacttcaaacgtcagcagc
agttcatcttctagcgatgtaatttctggaacaccacaacctgtaagccgaagacagtcc
tttattactttggaaaagtttaatagttcagagaacagaccttttagcccttctgcactg
aatagactatcaggagcatctgggactggtgctgttctagataaacaggaaagcacagat
ttatcaaggactccctccaaaatagaaaaacctaaagaggagaataaaagttcttcaaaa
tctgaattggaaggaacggttattgggataaaaagatcaagtcgcaggcaaaataaaaaa
gagcatggagaaattaggcaatccaagctaacaaaattagaacaggagaaaagtatacgg
gaatctgctgttgacacacctttggaaaataaatctagcacacctagtcaaatggaggag
aaaaattgcatgccagatactctgatacaggctcccaattctacagtaatagagagtaca
acagaatataaacaatttgtggatggcatggaagaggaggaaaagtgtagaggaccaagt
ttggattctaaagaaaatacaccaccgatagttcctgtatcaactgatcagatatctaat
gatgacagtcaggttccacagatgtcacataatcagaaaatactaagacgttcttcaaga
cgacggtcagaaatttcagaaagtacagcagatagtcaagataaggaaaacagtcagcaa
cgaaaggacaaacgtaaagaggatgaaaagtcttttcagaagaagtcgccacatataaaa
gaggacgcatcccaaaagcagaaatctgtttctgaaaaagctacagatagaaaagaaaat
gcaaataaaaaagagtgcaacttccacgagacgactactgcagaagacactgccccaaag
gagtctgacacttcaagatgtattgaagaggaaatgaacacacatgctaagaaatctgaa
agtgataatctgaaatctgaaagtgataatctgaaatctgaaagtgatgatgttcaggat
tctggtttagatacaccaggtcacaagaacataagagggcgcaccaggtatcagacaaga
agagcttcacaaggattgctttctagtatagaaaattctgaatctgatagctctgagaca
agagaagaaaataccaaaaggaaaagatctggaaaatggaaaaataaaagtgattctcct
cagagcaaggcgaaagagagagagagccaaaatcaggatcaagctttgcaagaaatagta
accgaaactgagaatctatctgatgtaaaaaataaagttgaaacaagttctgaagttgat
aaagatactgtattaatttctcagtcatgtgaagtgaaaaacaaaaatgtttatacagct
gttaatgaatttacaggaagtatagacatagcaaagacctcagttaatgggcagaacaca
aatatagaacaaaataaaaccaacatattggtagaagctttcatgaggccatgcatatct
gaaccagttttgaaaacaagacaggcaagtaagtcacctggtaagcaaagacttacagaa
agctatagtacaatcattctgtctgagtctgcagcaacatctaccacttcagatgctgtt
ctttcccctgaaaaatctttgcagaaacttgagtgccagcacaaaagaagcaagaggatg
agaagatcaaagagctataattgctgtggtgaaaactctcaccagcaagacaagtctttt
actgaattaaaacattcagttaaccatgcacaaggtgaacataaaaactcatgtagtcag
atagctatgactgaattagaaatggctaatgattctcattttgaagacaggctctctgtg
gaaccttgtgcaatgagtacaccattgtttcctattaagaaatcttgtcttaaggattca
gaaagagccataaaatctgagaatggtttggaaggaactgcttttccagtggaggaagat
cttgagaaactgtcatgtatcaaaagtaaaatttgtgatccagtaattcaggatctggag
cccaccactgcagttgacagtactgaagaatgtttttctggctatgtttcaaaagaacat
gtagaaagtgagactggcacagaagcagaagctacagaaaaggaggaattgagtcaaaat
gtgcaaatggaggagatatctgatacaggtactggtaacaaacctgaccaaacaaagata
aatgagccaaaatatgatcagaatgatgagaaaatgactaaggacactcctatagaagaa
cacagtccacaagagatggaggaaggtttaatattcactggaactgctgaagcaacagaa
aatataacctcagatcaggaaggtgcagaagaaaatagtaatgtgggttctcctcagaag
ttgaaggaattggattttgtagctttggttaaagttgatgaaagccctaatggagtgcaa
acacgccacaattggtctccttctgcttctccatccaccagtattttaaagaggggaata
aaaaggcatcaagaggatgattccccatctcctgctaacaagattcgtcgagtctctttt
gcaaatccaatttttcaagaaggattggcagatgacatcgataggagaagtcctgttgtt
agatctcattcttcaaatagttcaccatctttgcgaagttttaaaacttcatctaattca
caagccaagcatattaccactccaaccaaaggacttctgtccccaggatctcgtaaccct
aaatttaagagctcaaagaagtgtttaatcactgaaatggctaaggagtccctgccatgt
cctacagagagcgtataccctgcactggtgggctgtaaagctccagttgacataatttta
cctcagattacatcaaacatttgggcaagaggtttgggacagctcattcgagcaaagaat
attaagacagtgggtgacctgagtactctgacagcagctgaaatcaaaactcttcctatc
cgttctcctaaagtttccaatgttaaaaaggctcttaaaggatatcatgaaaaccaggtg
aaggctcgtggatttgatgaaattgcagcccttgaagacagagagaagccagaaaatctc
atagatgagagacccttttccgcagatgatgaaagactagaaacagttttgagtacacct
gttgctttgggcacagatggtcagtccacaacagatctcttgagccaggtcagtgcactt
gctgttcagctaacctctgaagatctccacagttattcaggaagccaactttttgaaatg
caagagaaacttggtagtatggcaaactgtattatgaaaaatctacagtcccgttggaag
tcaccaccccatgaaagctctgtttag

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