Carettochelys insculpta (pitted-shelled turtle): 142017464
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Entry
142017464 CDS
T11194
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04136
Autophagy - other
ciz04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
142017464 (ATG4C)
04136 Autophagy - other
142017464 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ciz01002
]
142017464 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ciz04131
]
142017464 (ATG4C)
03029 Mitochondrial biogenesis [BR:
ciz03029
]
142017464 (ATG4C)
Peptidases and inhibitors [BR:
ciz01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
142017464 (ATG4C)
Membrane trafficking [BR:
ciz04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
142017464 (ATG4C)
Mitochondrial biogenesis [BR:
ciz03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
142017464 (ATG4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
142017464
NCBI-ProteinID:
XP_074858434
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All DBs
Position
9:17273109..17317314
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AA seq
461 aa
AA seq
DB search
MNMEATGTDEVEKLKSKFMSAWHNVKYSWVLKTKTYFSRNSAVFLLGKCYHFKTDESSEL
SPDGSHLNIVDKIISGNVEEFRKDFVSRIWLTYREDFPQIKDSALTTDCGWGCTLRTGQM
LLAQGLVLHFLGRAWTWPAALNIENSDSESWASHTVKKLTASFEAPLTAEREPKVLSNNH
KEALKRDCYDSEMRDEIYHRKIISWFGDSPPASFGLHQLIEYGKKSGKTAGDWYGPAVVA
HILRKAVEESRDPELQGITLYVAQDCTVYSLDVVDRQCSSMGSEKAATKAVIILVPVRLG
GERTNMDYLEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIK
DFPLESFHCPSPKKMAFKNMDPSCTIGFYCRNMQDFERISEEITKMLKSSSKERYPLFTF
VKGHSRDYDFASSPLQEDNDLFPKDEKKRLKRFSTEEFVLL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggaggccacagggacagatgaagtggaaaagctaaaatccaagtttatgtct
gcatggcacaacgtgaaatatagttgggtattgaaaacaaaaacttactttagcagaaat
tctgctgtcttcttgctgggcaaatgttaccatttcaagactgatgaatccagtgaactc
tctccagatggatcccacttaaatatagtcgacaaaatcatttctggaaatgtagaagag
tttcgtaaagattttgtttctagaatatggttgacttacagagaggattttcctcagata
aaagactctgctttaacaacagactgtggttggggttgtacactgagaactggccagatg
ctgctggctcaagggctcgtacttcattttcttggtagagcctggacctggccggctgca
ttgaacattgaaaattcagactctgaatcatgggcaagccacacagtaaaaaagctgact
gcatcatttgaagcaccacttacagcagagagagaacccaaggtcctgtctaacaatcat
aaggaagcactaaagagagactgttatgacagtgaaatgagagatgaaatttatcataga
aaaataatctcttggtttggagattctccaccagcatcttttggcttgcatcagctaata
gaatatggaaagaagtctgggaaaacagctggagactggtatgggcctgctgttgtagcg
cacattttaagaaaagctgttgaagaatcaagagatcctgaattacaagggataactctc
tatgttgctcaggattgtacagtttacagtttggatgttgttgatagacagtgctcttct
atgggctctgaaaaagcagctaccaaagctgtaattatattagttcctgtaagacttggt
ggagagagaaccaacatggactacttggagtttgtaaagggaattttgagtcttgagtac
tgtgttggtattattggtgggaaacctaagcagtcatattactttgctggatttcaagat
gacagtttgatttacatggatcctcattactgccagtcttttgtagatgtcagcataaag
gatttccctcttgagtcatttcattgtccttccccaaaaaagatggcattcaaaaacatg
gatcctagttgtacaataggattttattgtagaaacatgcaagactttgaaagaatttct
gaagaaataactaagatgctgaaatcttcatctaaggagagatatcccttgtttactttt
gtaaagggtcattctagagactatgactttgcctccagtccgctccaagaagacaatgac
cttttccctaaggatgaaaagaaaagattaaaaagatttagtacagaagagtttgtcttg
ctttaa
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