Carettochelys insculpta (pitted-shelled turtle): 142017494
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Entry
142017494 CDS
T11194
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
142017494 (PTCH2)
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Ortholog
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Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
142017494
NCBI-ProteinID:
XP_074858497
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Position
9:complement(3583926..3618533)
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AA seq
1349 aa
AA seq
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MTSEPRCAPGPAPPRRAAGCAHAAAPERVPKGQAGGPAAPLWLRARFQALLFALGCRIQR
HCGKVLLAGLLAFGALALGLRAAAIETDLEQLWVEAGSRVSQELQYTKEKLGEEYVYTSQ
MLIQTPKREGENVLTQEALQLHLQAAQAASKVQVSLYGKSWDLNKICYKSGVPLLENGMI
ERMIEKLFPCVIVTPLDCFWDGAKLQGGSVHLPGQPDIQWTNLNPVQLLEELGQFTSLEG
FRELLDKAQVGQAYVERPCLDPREPACPTSAPNRLSQQGPDIPAELTGGCHGLSRKFMHW
QEELILGGTMKDPQGRLLSAEALQSMFLLMSPRQLYEHFRDDYEIQDIGWSEQKAAAILE
AWQREFVELAQESLPQNSSQHAHAFSSTTLSDIMKSFSDVSAVRVAGGYLLMLAYACVTM
LRWDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLALGIGVDDMFL
LAHAFTETSQHVPFKERTGECLRRTGTSVALTSISNTIAFSMAALVPIPALRAFSLQAAV
VVVFNFAMVLLVFPAILSLDLHRRQDQRLDVLCCFYSPCSSRVIQIQPQELADAGASPAC
QPSPYRPSATAASTQITTTVQAFARCDPSGRHVVTILPPTAQVCTVPADPLGSQLFAPAS
STRDLLGQLDGAKGSRECVPLPLCRWNLADFAREKYAPLLLQTQSKGIVVLLFLVLLGLS
LYGSTLVRDGLHLTDIVPRGTKEHAFIAAQAKYFSCYHVAVATTGAFHYPSSQEALYALH
RALGALRHVVRDEARQPPKMWLHYFRDWLRGLQAAFDQDWRAGRITRESYRNGSEDGALA
YKLLVQTGNKREPFNYDQLTMRRLVDEKGLIPPETFYICLTVWVSNDPLGVAASQANFYP
PPPEWVHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRQTSDFVAAIESVRAACEEAARE
WGVASYPSGYPFLFWEQYLGLRRWFLLAISIALAGTFLVCAALLLNPWAAGIIVAVLAMM
TVELFGIMGLMGIKLSAIPAVILIASVGIGVEFTVHVALGFLTAMGSRPLRSALALEHTL
APVLDGALSTLLGLLMLAGSEFDFILRYFFAVLTVLTVLGLLNGLVLLPVLLSVIGPPAE
VTPAENSSRLPSPEPVPPPINHHSFYMQPPPAWHSTFPEPTDPQCYVESPAAPAQPYDPG
AYILVQASKSPSFPSLTVVKTYQDHQERPGKKEPQSPHGAQPLPAGDPPPAPAASPDLRD
LPKPSSPGARTAPGRAPPPLRTALPAYATVTATACVTLALHAPLPGSCQGYAHEGFEATE
SDSPEEPGPPAHGSTALQHPGGAECSMQP
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgacctcggagccccgctgcgcgccgggccccgctccgccccgcagggcagccggctgc
gcccacgccgcggcgcccgagcgggtccccaagggccaggccgggggccccgcggccccg
ctgtggctgcgggccaggttccaggcgctgctcttcgcgctgggctgccgcatccagcgg
cactgcggcaaggtgctgctggccgggctgctggccttcggcgccctggcgctggggctg
cgggcagccgccatcgagacggacctggagcagctctgggtggaagccggtagccgcgtc
agccaggagctccagtacacaaaagagaagctgggggaagaatacgtctacacctcccaa
atgctgatccagaccccgaagcgggaaggggagaacgtcctcacccaggaggccctgcag
ctgcacctccaggcggcccaggctgccagcaaagtgcaggtctcgctctatggaaagtcc
tgggacctgaacaaaatctgctacaagtctggcgtccccctcctcgagaacggcatgatc
gagcggatgatcgagaagcttttcccctgtgtgattgtgacaccgctcgactgcttctgg
gatggtgccaagctgcagggaggctctgtccatctcccggggcagccggacatccagtgg
accaacctgaaccccgtccagctgctggaggagctgggccagttcacctcactggagggc
ttccgggagctgctggacaaggcccaggtggggcaggcctatgtggagcggccctgcctc
gacccccgcgagcccgcctgccccaccagtgcccccaacaggctgagccagcagggcccc
gacatccccgctgagctgacggggggctgccacggcttgtcccggaagttcatgcactgg
caggaggagctgatcctggggggcaccatgaaggacccgcaggggaggcttctgagcgct
gaggccctgcagagcatgttcctgctcatgagcccccggcagctctacgagcacttccgg
gacgactacgagatccaggacatcggctggagcgagcagaaggcggctgccatcctggag
gcctggcagcgggagtttgtggagctggcgcaggagtccctcccgcagaacagctcccag
cacgctcacgccttctccagcaccacgctcagtgacatcatgaagtccttctcggacgtg
agcgccgtccgcgtggccgggggctatctcctgatgctggcgtacgcctgcgtgaccatg
ctgcgctgggactgctccaagtcccagggggccgtgggcctggctggcgtcctgctggtg
gccctgtccgtggcctcagggcttgggctctgctccctgctggggatctccttcaacgcg
gccaccacccaggtgctgccgttcctggctctgggtatcggggtggacgatatgttcctc
ctggctcatgccttcactgagaccagccagcacgtccccttcaaggagcggacaggcgag
tgcttgaggcgcacaggaaccagcgtggctctcacctcaatcagcaacacgatcgccttc
tccatggccgccctggtgcccatccccgccctgcgcgccttctccctgcaggccgctgtg
gtggtggtgttcaacttcgccatggtgttgctcgtcttcccggccatcctcagcctggac
ctgcaccggcgccaggaccagcggctggatgttctgtgctgcttctacagcccatgctcc
tcccgcgtcatccagatccagccgcaggagctggccgatgccggggccagccccgcctgc
cagccctcgccctacaggccctcggccacggccgccagcacccagatcaccaccacggtg
caggccttcgcccgctgcgacccctcgggccgccacgtcgtcaccatcctgccgcccact
gcccaggtctgcaccgtgcccgccgacccgctgggctcccagctcttcgccccagccagc
tccacccgcgacctgctgggccagctggacggggccaaggggagccgggagtgcgtgccg
ctgcccctctgccgctggaacctggccgactttgcccgggagaagtacgcacccctcctg
ctgcaaacccagagcaagggcatcgtggtgctgctgttcctggtgctgctggggctcagc
ctgtacggcagcacgctggtgcgcgacgggcttcacctgaccgacatcgtgccgcggggc
accaaggagcacgccttcattgccgcccaggccaagtacttctcctgctaccacgtggcc
gtggccaccaccggcgccttccactaccccagctcgcaggaggcactgtatgccctgcac
cgggccctgggtgccctgcggcacgtggtgcgcgacgaggcccgccagccccccaagatg
tggctgcactacttccgggactggctgcgaggcctgcaggctgccttcgaccaggattgg
cgggccgggcgcatcacccgcgagagctaccgcaacggttccgaggacggcgcgctggcc
tacaagctgctggtgcagaccggcaacaagcgggagcccttcaactacgaccagctcacc
atgcggcgcctggtggacgagaagggcctcatacccccggagaccttctacatctgcctg
actgtgtgggtcagcaacgaccccctgggcgtcgccgcctcccaggccaacttctacccc
ccgccacccgagtgggtccacgacaagtacgacaccaccggcgagaacctacgaatccct
gcggctcagcccctggagttcgcgcagttccccttctacctgagcggcctgcgccagacc
tcggacttcgtggcggccatcgagagcgtgcgggcagcgtgcgaggaggcggcgcgggag
tggggcgtggccagttaccccagcgggtaccccttcctcttctgggagcagtacctgggc
ctgcgccgctggttcctcctggccatcagcatcgccctggccggcaccttcctggtgtgc
gccgccctgctgctcaacccctgggccgccggcatcatcgtggccgtgctggccatgatg
acggtggagctctttgggatcatggggctgatgggcattaagctgagcgccatcccggcc
gtgatcctcatcgcctccgtgggcatcggcgtcgagttcactgtccacgtggccctgggg
ttcctgacagccatgggcagccggccgctgcgctcagccctggctctggagcacacgctg
gcgcctgtgctggacggggcgctctccacgctgctgggcctgctcatgctggctggctcc
gagttcgacttcatcctgaggtacttcttcgctgtgctcaccgtcctgactgtcctgggc
ctcctgaacggcctggtgctgctgcccgtcctgctgtcggtcatcgggcctccggccgag
gtcaccccagcagagaacagcagccgcctgccgtcaccagagcccgtccccccgcccatc
aaccaccacagcttctatatgcagccaccccccgcctggcacagcaccttcccagagccc
acagacccgcagtgctacgtggagagccctgcagcccccgcccagccctacgaccccgga
gcctacatcctggtgcaggccagcaagagccccagcttcccctccctcacggtggtgaaa
acctaccaggatcaccaggagcggccagggaagaaggaaccccagagcccccatggggcc
cagcccctgcctgccggcgacccccccccagcccctgccgcctccccggatctcagggac
ttgcccaagcccagctcccctggcgccaggactgcccccggccgagcgcccccgcccctg
cgcactgccctccctgcctacgccacggtgacggccaccgcctgtgtgacgctggccctg
cacgccccgctgcccggctcctgccagggctacgcccacgagggctttgaggccaccgag
tcggacagtcccgaggagcccggcccgcctgcccacggctccaccgcgctccagcaccca
ggaggggcagagtgctccatgcagccctag
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