Carettochelys insculpta (pitted-shelled turtle): 142017543
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Entry
142017543 CDS
T11194
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142017543 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciz03019
]
142017543 (NDC1)
Messenger RNA biogenesis [BR:
ciz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142017543 (NDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
142017543
NCBI-ProteinID:
XP_074858609
LinkDB
All DBs
Position
9
Genome browser
AA seq
724 aa
AA seq
DB search
MFDFSVGLVTCPHQTQFKTLLTSLGSWYLNIFFPFPSRWMPSLFSSPSWDCNPWLRKLKP
SGRHHLHGQLFTSRMHLSLLGLLPFTGRIEENTACAPYHFTYSFSDWYTSYAIFCMLLMS
VVILIISIFNVEFYAVVPSIPCSRLALLGKIIHPRQVVHSVVHAIMGMLVAWCAAVMTKG
KFQFLALPCTASESLDGAVEHMCLNEYHLFLLLSGAFMGYSYSLSYLVNNMNYLPFPIVQ
QYKYLRFRRSVPLLVKHSCVESLYLIRNVCVAYYFFGYIPRAWITTTMDLQIDSKLHPLD
TLTGLLDLSLLYHTWLSSIFLLITWHIAWLLFKIYATEAHHFPVQPTFAEETDQCLPKIL
NSNPPLLIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWTAISKECLNLLSDLTQK
LIMQQEAAATNGRVKQPPAGELGRSPSSSEAAVTEEMAFHTQRSHVASRAHMPSLVKTSF
LPLKALSASDLGSSFGSPFSSPALNRQAGIVDLNSPWHGSVQSPHVMRRGPKLWTSSSDL
QMNGSYQESFPVISVARVGNEAIQPSFIYTWLQNKQEQVRSFLSKRVLIMYFFSKHPEAS
IQAVFSDAQMHIWALEGLSRLVAASFTEDRFGVVQTTLPAILNTLLTLQEVVDKHFKLPH
ASSKPSRILGSVMDTSYKSLRFALRASLKTAIYRMTTTFGQHLNAVQVSAEHKKRLQQFL
EFKE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacttctctgtgggcttggtcacctgcccccatcaaacacagtttaaaaccctc
ctcactagcttaggcagttggtatctaaatattttcttccctttccccagtaggtggatg
ccatctctgtttagcagtccttcttgggactgcaatccatggttaaggaagctgaagccc
tccgggcgacaccatcttcatggtcagctattcacctccagaatgcatctgtctctgctt
gggctcctaccctttactggaaggattgaagaaaacactgcctgtgctccgtaccacttc
acatattcattcagtgattggtatacttcttatgccatcttttgtatgctgcttatgtct
gtggtgatactgataataagcatcttcaatgttgaattttatgcagttgtgccttctatt
ccctgctctcgattagcactattaggaaagattattcacccacggcaagttgtccattca
gttgtacatgctataatgggaatgttggtggcgtggtgtgctgcagttatgactaaggga
aagttccagttccttgctctaccctgcacagcttcagaaagcctagatggtgctgtagag
catatgtgtctaaatgagtatcacctcttcctcctgctctctggagctttcatgggctac
agttatagtctctcataccttgttaacaatatgaactacttgccatttccaatcgtacag
caatacaagtacttacgtttcagaagatctgtgcctctgctggttaagcatagttgtgtg
gagtcactgtacttgattagaaacgtctgtgttgcatactatttttttgggtacatccca
agagcgtggataactaccacaatggaccttcagatagatagtaaacttcatcctcttgac
acacttactggtcttctggatctatccttgctctaccacacctggttaagtagtatattt
cttctgattacctggcacattgcatggctgctcttcaaaatctatgctacggaggcgcat
cattttcctgttcagccaacttttgctgaggagacagaccaatgcctgcctaaaatctta
aacagcaaccctcccctccttataaagtttttggccttacaggacttgatgttactttcc
cagtattctcctgtacggcgacaagaggtcttcagcctcagtcagccaggtgggcatcct
cacaactggacagcaatatcaaaggagtgcttgaatcttttgagtgacttgacgcagaag
ctgattatgcagcaggaagctgcagccacaaatgggagagtgaaacagccacctgcggga
gaactaggaagatccccaagttcttcagaagcagctgttacagaagaaatggccttccat
acacagaggtctcatgttgcttctagagcccacatgccttccttggttaaaacatccttc
ctacccttaaaggcattgtctgcatctgatcttggaagctcttttggttcacctttcagt
tctcctgctctaaatcgccaggctggaattgtagatttaaactctccttggcatggatca
gtccaaagtcctcatgttatgagaagaggaccaaagctgtggacatcaagttcagatcta
caaatgaatggctcttatcaagagtccttccctgtgatttctgttgcaagagttggtaat
gaagcaatacagccaagttttatttatacatggctccagaacaagcaagagcaggttcgg
agtttcttgtcaaaacgggtgctgataatgtatttcttcagtaagcatcctgaggcctct
atccaggctgtcttttctgatgcccaaatgcatatttgggcattagaaggtctgtctcgt
ttggtagcagcctcatttactgaagaccgatttggagttgtccaaactaccttgccagct
attctgaacaccttacttactcttcaggaggtggtagacaagcacttcaagctgcctcat
gcttccagcaaaccttccaggattttgggaagtgtgatggacacctcttacaagtcgcta
cgatttgcgcttagagcatctctgaaaacggcaatataccggatgactactacttttgga
caacatctaaatgcagttcaagtgtctgcagagcataagaaaagacttcagcaattcctg
gagttcaaagaatag
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