Carettochelys insculpta (pitted-shelled turtle): 142017630
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Entry
142017630 CDS
T11194
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciz03000
]
142017630 (RC3H1)
04121 Ubiquitin system [BR:
ciz04121
]
142017630 (RC3H1)
Transcription factors [BR:
ciz03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
142017630 (RC3H1)
Ubiquitin system [BR:
ciz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142017630 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142017630
NCBI-ProteinID:
XP_074858806
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Position
9:complement(59068335..59155806)
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AA seq
1139 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTISTD
IDLLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSATMLSDE
GAVDLPSRKSSALPNGIAPPSSAVTQLISRGTDSGYDSTLKPGKIDHLSSSAPGSPPDLL
ESVPKNSVSALPVNPHPVPPRGPSDLPPISVSKQLQMVPRGSQLLAGQQADVFYQDPRGA
APPFEPSPYLPGVYYPTQSSQCVSRFARPLPSASDPGGPYLDHYPPYLQDRVVNSQYGTQ
PQQYPPMGQPMYQPHYDNRRVYPSAQPYQREDIVRGSPVPIEIPQQTVPPYVPESRDRYQ
QVEGYYPVGPHLNQIRPSYHREPYNRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPP
PFAPSPTLPHPFHQEEYSDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDPKPKDVVA
AGSVEMANIDSKGMRDQRLDLQRRAAEAGDDDLIPFGDRPTVSRFGAISRTSKTMYPSSG
PMQAMAVQGASTKSINIAEYSPYGTHGGWGASPYSPHQNIPSQGRFSDRERLSMSDVAGH
GKPLASAEREKQLRLELQQLNHQISQQTQLRGIEAANNRLLLQRETTTLPGQPQPPPPPP
KWPGMISSEQLSMELHQVEREIGKRTRELSMERQSSLDMKSNLGTNKQTENGQLEPSTKV
SAEDLTLTFSDVPNGSVLTQENISLLSNKTSSLSLSEDPEGGGDNQDSQRTGVAPTSSP
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgcccaatttgcacacagact
tttgatgaaacgatccggaagcccatcagcttgggctgcggccacactgtttgcaagatg
tgcctcaacaagctccaccgtaaggcatgtccctttgaccagaccactatcagtacagat
attgatcttctccccgtgaactcagccttgctgcagctagtcggtgctcaggttcctgag
cagcagccaattactttgtgcagtggagcagaagacaccaagcattatgaggaggccaag
aaatgtgtagaagagctagcattgtacctcaaaccactcagcagtgcgagaggtgtgggt
ctgaacagtaccactcagagtgtgctgagtcgccccatgcagagaaagcttgtgacatta
gttcactgccagctagtagaggaagaagggcggatcagagccatgcgtgcagcacggtcg
ttgggtgaacgaacagtcactgagctcattcttcaacatcaaaatccccagcaactctct
tccaacctctgggctgcagtgagggccaggggctgccagttccttgggccagcaatgcag
gaggaagcactgaagctggttctgctggctttggaagatggatctgctttgtcacgaaaa
gtcttggttctctttgtggtgcaaaggttggaaccacgatttcctcaggcttctaaaacc
agcattgggcatgttgtccagcttctttacagagcctcttgcttcaaggtgacaaaacgt
gatgaggactcctccctgatgcaattaaaggaggagttccgtacttacgaagctctgcga
agggaacatgattcccagattgtgcagattgccatggaagcaggtttgcgcattgctcca
gatcagtggtcctcgctgctctatggagaccagtcccacaaatcccacatgcagtccatc
attgacaagttgcagaccccagcctcatttgctcagagtgtccaagaactaaccattgct
ctccaaaggactggagatcctgctaacctgaaccggcttcgccctcatctggagcttttg
gcaaatattgaccctagtccagatgccccacccccaacatgggaacaactagaaaatgga
ctagttgctgtgaggacagtagtacatggattagttgattacatccaaaatcacagcaag
aaaggaacagaccagcagcagcctcctcaacatagcaagtataagacctacatgtgccga
gacatgaagcagagaggcgggtgtccccgtggagccagctgcacctttgcacactcacag
gaggaattggaaaaatttcgtaaaatgaacaaacgcctggttcccagaagacccctgagt
gcctctttgggccagctaaatgaggtgggcctgccttcagcaactatgctctcagatgaa
ggggcagtggacttgcccagtagaaaatcctctgccttgccgaatggaattgcgccaccg
agcagcgcagtcacacagcttatctcccgagggaccgactccggctatgattctactctg
aagccagggaagattgaccacctgagcagcagtgcccctggatcccctcctgacttgctg
gagtctgtccccaagaactctgtttctgccttaccagtgaaccctcaccctgtgccaccg
agaggtccttcggatctgcctccaatttccgtctctaagcagctccaaatggtaccacgt
gggtcacagttgcttgctggtcagcaagccgacgtcttttatcaggaccctagaggagct
gccccaccatttgagccatcgccttacctaccaggtgtgtactatcctactcagtcttca
cagtgtgtgtctcgttttgcccgacctctaccatctgcttctgaccctggtggtccttac
ttagaccattacccaccctaccttcaggatcgtgtggtgaactcacagtacggcacacaa
ccacagcagtatcctcccatgggacaacctatgtatcaaccacactatgacaaccggcgt
gtatacccctctgcccaaccataccaacgggaagatattgtccgaggaagccctgtgccc
attgaaattccacagcaaactgtaccaccctatgtacctgaatccagagacagataccag
caagtggagggctattatccagtgggtccacatctcaatcaaatcagaccttcataccac
agagagccttataaccgacttccacctccacctcaaccccatcccagcctggatgagctt
catcgccgaaggaaggaaatcatggcccagttagaagagaggaaggtgatctctccacct
ccctttgcaccttcaccaactttgcctcaccccttccaccaagaggagtattcggatgaa
gacctgaaggtagctgggaaatacaaaggaaacgattatagccagtactctccttggtcg
tgtgacaccattggctcctacattggaaccaaagatccaaaacccaaagacgtagtggca
gcggggagcgtagagatggcgaacatagacagtaaaggcatgcgtgaccagcggttggac
ctgcagagaagggcagcagaagcaggggacgatgacctcatcccatttggagaccggcct
actgtatcgaggtttggggccatctcgcgtacttccaaaacgatgtacccaagttctggc
cccatgcaggccatggccgttcagggagcttccaccaaatctatcaacattgcagagtac
agtccatatggaactcatggtggctggggagcgtctccatattcaccccaccaaaacata
ccttctcagggacgcttcagtgaccgggagagattgtccatgtcagatgtagccggccac
gggaaacccttagcctcagctgagagagagaagcagctccggctggaactgcaacaacta
aatcatcagatcagccagcaaacgcagttacgaggaatagaggctgctaataacaggctg
ctgttgcagagggagacgaccaccctgccaggccagccccagcctccaccaccacctcct
aaatggcctggaatgatctcaagtgaacagctgagcatggaactgcaccaggtggagagg
gaaattgggaagagaacccgtgagctgagcatggagaggcagtcttccttggacatgaaa
agcaacctgggcaccaataaacagacagaaaacggacaactagaaccatcaaccaaggtt
tcagctgaggacctcacactgaccttcagtgatgttccaaatggatcagtcttgacacaa
gagaacatcagcctcctgtcaaacaagacctcctctctgagcttgtcagaagaccctgag
gggggaggagacaaccaggactcccagagaacaggagttgcacccacgtcttctccatga
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