Carettochelys insculpta (pitted-shelled turtle): 142017849
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Entry
142017849 CDS
T11194
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04115
p53 signaling pathway
ciz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142017849 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
142017849 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ciz04121
]
142017849 (COP1)
Enzymes [BR:
ciz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142017849 (COP1)
Ubiquitin system [BR:
ciz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142017849 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
142017849 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
Beta-prop_CAF1B_HIR1
zf-RING_2
zf-RING_UBOX
Beta-prop_EML
Beta-prop_DCAF4
zf-C3HC4_3
zf-RING_5
Beta-prop_WDR90_POC16_2nd
zf-C3HC4_4
WD40_RFWD3
RING_XB3-XBAT31
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
EAD4
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
142017849
NCBI-ProteinID:
XP_074859256
LinkDB
All DBs
Position
9:complement(59929728..60093168)
Genome browser
AA seq
715 aa
AA seq
DB search
MSSSRQQPPQHPPAGQGAAASAVTSASSSSSSSAAAPGSCSSSAGLGAPARPVLVAAAVS
GTGAAASASGLARLAGAARPGGGGGGGSSSGGGSRKRPLLTPLCNGLLNSYEDKSNDFVC
PICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQ
KQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAES
HAAQLQILMEFLKVARRNKKEQLEQIQKELSVLEEDIKRVEEMSGLYSPGSEDSKVPQFE
APSPSNSNIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRM
TRVSDDSRTSSQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYF
AIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVI
LWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKA
NVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSA
STDSQLKLWNVGKPHCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLL
TFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcagccggcagcagccgccgcagcaccccccggccgggcagggcgccgcggcc
tccgccgtcacgtcggcttcctcctcctcctcctcgtcggccgcggcgccgggctcttgc
tcctcgtccgcggggctgggggcccccgcgcggcctgtgctggtggcggccgccgtctcg
ggcaccggggccgcggcctcggcctcggggctggcccggctggcgggggcggccaggccc
ggcgggggcggcggcggcggctcctcgtcgggcggcgggagcaggaagaggccgctgctg
accccgctctgcaacgggctcctgaactcgtacgaggacaagagcaacgacttcgtgtgc
cccatctgttttgatatgattgaagaagcatacatgacaaaatgtggacacagtttctgc
tataaatgtattcatcagagtctggaggataacaacagatgccccaaatgtaactatgtt
gttgataacatagatcatctttaccccaactttttagtgaacgagctcatcctcaaacag
aagcaaagatttgaggaaaagcgattcaagctggaccattcagtgagtagcaccaatgga
cacagatggcagatatttcaagatttattgggaactgatcaagataatcttgacttggcc
aatgttaacttgatgttggagctgcttgtgcaaaagaagaagcagttagaggcagagtct
catgctgctcaactacagatcctcatggaattcctcaaggttgccaggagaaataaaaaa
gagcaactggagcagatccagaaagagctaagtgtcctggaagaggatattaaacgagtg
gaggaaatgagtggcttgtattcgcccggcagtgaggatagtaaagtgcctcaatttgaa
gctccctctccgtcaaacagtaatattattgattccacggagtacagccagcctccaggg
ttcagcggcagttctcagactaaaaaacagccatggtataacagcacattggcatcaagg
cggaagaggcttacagctcattttgaggacctggagcaatgctatttttccaccaggatg
actcgtgtatcagatgacagcagaacttcaagccagctggatgaatttcaggagtgcctc
tccaagttcacccgctacaattccgtccgacctttggcaacgctgtcttacgctagcgat
ctctataatggttccagtatagtatccagtatcgaatttgaccgggactgtgactatttt
gctattgctggggtgacgaagaagattaaagtctacgaatacggcactgtcattcaggat
gcagtggacattcattaccccgagaatgaaatgacctgtaattccaaaatcagctgtatc
agctggagtagctaccacaagaaccttttagccagcagtgactatgaaggcaccgtcatc
ctttgggatgggttcactggacaaaggtcaaaggtctaccaggaacatgagaaaagatgc
tggagcgttgactttaacttgatggaccccaaactattggcttcaggctccgatgatgca
aaagtgaaactgtggtcaaccaacctggataattcagttgcgagtatcgaggccaaggct
aatgtgtgttgtgtcaaattcagcccttcttctagataccatctggcatttggctgcgca
gatcactgtgttcactactatgaccttcgcaacactaagcaaccaatcatggtgttcaaa
gggcatcgcaaggcagtctcctatgcaaagtttgtgagtggggaagaaattgtctctgcg
tcaacagacagtcaactgaagttgtggaacgttggaaaacctcactgcctgcgctctttc
aagggtcacatcaatgagaagaacttcgtaggcctggcatccaatggagactacatcgcc
tgtggaagtgaaaataactccctctacctgtactacaagggcctctcaaagacacttctg
actttcaaatttgacacagtcaaaagcgtcttggacaaggaccggaaagaggatgacacg
aatgaatttgtcagtgctgtgtgctggagagcactgccagatggggaatccaacgtgctc
attgctgctaacagtcagggtacaattaaggtcctggagctggtatga
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integrated database retrieval system
