Carettochelys insculpta (pitted-shelled turtle): 142018009
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Entry
142018009 CDS
T11194
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ciz Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ciz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142018009 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ciz03041
]
142018009 (PRPF38A)
Spliceosome [BR:
ciz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
142018009 (PRPF38A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
GIP4
Motif
Other DBs
NCBI-GeneID:
142018009
NCBI-ProteinID:
XP_074859527
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All DBs
Position
9
Genome browser
AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERAPSPDHRRRGYRDLDKPRRSPALRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggacggtgaaggacgcgcatagcatccacggcaccaacccgcagtacttg
gtggagaagatcatccgcacgcgcatctacgagtccaagtactggaaggaggagtgcttc
ggtctgacggctgagttggtggtagataaagccatggaactgaagtacgttggtggcgtt
tatggtggaaacatcaagcctacaccgttcctctgcttgactctgaaaatgctgcagatc
cagcctgaaaaggacatcattgttgagtttataaagaacgaggatttcaaatatgtcaga
atgcttggagcactgtatatgagattgacaggcactgccattgactgctacaaatacctt
gaaccactgtacaatgattaccgaaaaataaaaagtcaaaacagaaatggggagtttgaa
ctgatgcatgtggatgagtttattgatgaacttcttcacagtgaacgtgtgtgtgatatc
attttgcctcgattgcagaaacgttacgttctggaagaagctgaacaactggagcctcgg
gttagtgctttagaagaagatatggatgatgtagagtccagcgaggaagaggaggaggaa
gatgagaagctggaaagggcaccttcccctgatcatcgcagaagaggctacagagaccta
gataaaccccggagatctccagctctgcgatacaggaggagccgcagcagatctccaaga
agacgaagcagatccccaaagaggagaagcccatcaccacggcgggagagacatcgcagc
aaaagtccaaggcgacaccggagcaggtccagggagaggcgccacagatcaagatctaaa
tctccaggacatcatcgtagccacagacatagaagccattccaagtcacctgaaagatct
aagaaaagccataagaagagtcggcgagggaatgaataa
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